Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_K09
(1182 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 73 5e-13
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 73 5e-13
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 64 2e-10
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 61 1e-09
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 61 1e-09
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 61 1e-09
L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock pro... 61 1e-09
AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical ... 56 5e-08
Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical pr... 54 3e-07
Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical pr... 53 3e-07
Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical pr... 52 1e-06
U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock prot... 52 1e-06
Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical pr... 48 2e-05
U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock prot... 48 2e-05
U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock prot... 48 2e-05
K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock prot... 48 2e-05
K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock prot... 48 2e-05
EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock pr... 48 2e-05
M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein ( C.ele... 47 3e-05
AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock pr... 47 3e-05
M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein ( C.ele... 46 7e-05
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 46 7e-05
Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical pr... 45 9e-05
X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C. el... 45 1e-04
Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical pr... 44 2e-04
X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal frag... 44 2e-04
U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock prot... 44 2e-04
U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock prot... 44 2e-04
K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock prot... 44 2e-04
K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock prot... 44 2e-04
Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical p... 38 0.010
Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical pr... 38 0.010
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 72.5 bits (170), Expect = 5e-13
Identities = 32/69 (46%), Positives = 45/69 (65%)
Frame = +1
Query: 235 VKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLPQGSQPNKITSTLSAD 414
V F E+++V + D+ ++IE KH EK D+ G + RHFVRKY LP G +P +I S LS +
Sbjct: 63 VSQFEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFVRKYNLPTGVRPEQIKSELSNN 122
Query: 415 GVLKIVVPK 441
GVL + K
Sbjct: 123 GVLTVKYEK 131
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 72.5 bits (170), Expect = 5e-13
Identities = 32/69 (46%), Positives = 45/69 (65%)
Frame = +1
Query: 235 VKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLPQGSQPNKITSTLSAD 414
V F E+++V + D+ ++IE KH EK D+ G + RHFVRKY LP G +P +I S LS +
Sbjct: 62 VSQFEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFVRKYNLPTGVRPEQIKSELSNN 121
Query: 415 GVLKIVVPK 441
GVL + K
Sbjct: 122 GVLTVKYEK 130
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 63.7 bits (148), Expect = 2e-10
Identities = 30/76 (39%), Positives = 46/76 (60%)
Frame = +1
Query: 214 RFEXNLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLPQGSQPNKI 393
RF ++ F E+IQVK DD ++IE +HE+ +D+ F +FVRKY+LP+ N I
Sbjct: 113 RFAVDMDCYQFRPEEIQVKTLDDTLMIEGRHEDIRDKDNFTKMYFVRKYQLPRDVDFNSI 172
Query: 394 TSTLSADGVLKIVVPK 441
S++ A G L++ K
Sbjct: 173 QSSIDAKGRLQVEAGK 188
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 61.3 bits (142), Expect = 1e-09
Identities = 30/80 (37%), Positives = 52/80 (65%)
Frame = +1
Query: 199 KTQKXRFEXNLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLPQGS 378
KT + RF+ V ++ E++ VK D+ +++ AKHEEK ++ + R + +++ LP+G+
Sbjct: 26 KTLRLRFD----VANYKPEEVTVKTIDNRLLVHAKHEEKTPQRT-VFREYNQEFLLPRGT 80
Query: 379 QPNKITSTLSADGVLKIVVP 438
P +I+STLS DGVL + P
Sbjct: 81 NPEQISSTLSTDGVLTVEAP 100
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 61.3 bits (142), Expect = 1e-09
Identities = 30/80 (37%), Positives = 52/80 (65%)
Frame = +1
Query: 199 KTQKXRFEXNLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLPQGS 378
KT + RF+ V ++ E++ VK D+ +++ AKHEEK ++ + R + +++ LP+G+
Sbjct: 123 KTLRLRFD----VANYKPEEVTVKTIDNRLLVHAKHEEKTPQRT-VFREYNQEFLLPRGT 177
Query: 379 QPNKITSTLSADGVLKIVVP 438
P +I+STLS DGVL + P
Sbjct: 178 NPEQISSTLSTDGVLTVEAP 197
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 61.3 bits (142), Expect = 1e-09
Identities = 30/80 (37%), Positives = 52/80 (65%)
Frame = +1
Query: 199 KTQKXRFEXNLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLPQGS 378
KT + RF+ V ++ E++ VK D+ +++ AKHEEK ++ + R + +++ LP+G+
Sbjct: 137 KTLRLRFD----VANYKPEEVTVKTIDNRLLVHAKHEEKTPQRT-VFREYNQEFLLPRGT 191
Query: 379 QPNKITSTLSADGVLKIVVP 438
P +I+STLS DGVL + P
Sbjct: 192 NPEQISSTLSTDGVLTVEAP 211
>L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock
protein protein 12.2 protein.
Length = 110
Score = 61.3 bits (142), Expect = 1e-09
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Frame = +1
Query: 181 HXGAIVKTQ--KXRFEXNLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVR 354
H +VK K +FE L V+ FT ++I+VKV+ ++I +HE + D G ++R R
Sbjct: 20 HNDGVVKVHNTKEKFEVGLDVQFFTPKEIEVKVSGQELLIHCRHETRSDNHGTVAREINR 79
Query: 355 KYKLPQGSQPNKITSTLSADGVLKIVVPKE 444
YKLP + + S L+ GVL I K+
Sbjct: 80 AYKLPDDVDVSTVKSHLATRGVLTITASKK 109
>AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical
protein Y55F3BR.6 protein.
Length = 180
Score = 56.0 bits (129), Expect = 5e-08
Identities = 27/78 (34%), Positives = 42/78 (53%)
Frame = +1
Query: 196 VKTQKXRFEXNLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLPQG 375
++ F L V + A+ ++V V D+ I++E H EK+D G I F R++ LP+
Sbjct: 74 IRVTNTSFHAILDVSKYDADSLKVTVVDNNIIVEGSHGEKEDTYGTIESTFKRRFPLPKA 133
Query: 376 SQPNKITSTLSADGVLKI 429
P + S L+ADG L I
Sbjct: 134 VAPESVQSQLTADGHLTI 151
>Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical
protein T22A3.2a protein.
Length = 109
Score = 53.6 bits (123), Expect = 3e-07
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +1
Query: 151 SVDW-LEHLPWHXGAI-VKTQKXRFEXNLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDE 324
S DW L+H + G + V +FE L F I VKV I+I +H+ + E
Sbjct: 13 SWDWPLQH---NDGVVKVTNTSEKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDNRPTE 69
Query: 325 QGFISRHFVRKYKLPQGSQPNKITSTLSADGVLKIVVPK 441
G ++R R YKLP+ P+ + S L++ GVL I K
Sbjct: 70 YGIVNREVHRTYKLPEDVDPSTVRSHLNSSGVLTITANK 108
>Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical
protein F38E11.1 protein.
Length = 109
Score = 53.2 bits (122), Expect = 3e-07
Identities = 27/71 (38%), Positives = 37/71 (52%)
Frame = +1
Query: 217 FEXNLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLPQGSQPNKIT 396
FE L +F +I VK +F+ I H K D+ G I+R R Y+LP+G+ P I
Sbjct: 33 FEVGLEAHNFLPNEIDVKNIGEFLEIHMAHTTKDDKFGSITRSITRCYRLPKGTDPATIK 92
Query: 397 STLSADGVLKI 429
S L G+L I
Sbjct: 93 SKLDGSGILHI 103
>Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical
protein F38E11.2 protein.
Length = 110
Score = 51.6 bits (118), Expect = 1e-06
Identities = 27/75 (36%), Positives = 39/75 (52%)
Frame = +1
Query: 217 FEXNLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLPQGSQPNKIT 396
FE L +F ++I+VK + + I +H KKD G +SR+ R YKLP+ I
Sbjct: 34 FEVGLEAHNFLPKEIEVKNIGELLEIHMEHNVKKDSFGDVSRNITRCYKLPKNVDMKTIK 93
Query: 397 STLSADGVLKIVVPK 441
S L + G+L I K
Sbjct: 94 SNLDSHGILHIEARK 108
>U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock protein
12.6 protein.
Length = 110
Score = 51.6 bits (118), Expect = 1e-06
Identities = 27/75 (36%), Positives = 39/75 (52%)
Frame = +1
Query: 217 FEXNLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLPQGSQPNKIT 396
FE L +F ++I+VK + + I +H KKD G +SR+ R YKLP+ I
Sbjct: 34 FEVGLEAHNFLPKEIEVKNIGELLEIHMEHNVKKDSFGDVSRNITRCYKLPKNVDMKTIK 93
Query: 397 STLSADGVLKIVVPK 441
S L + G+L I K
Sbjct: 94 SNLDSHGILHIEARK 108
>Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical
protein T22A3.2b protein.
Length = 112
Score = 47.6 bits (108), Expect = 2e-05
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Frame = +1
Query: 151 SVDW-LEHLPWHXGAI-VKTQKXRFEXNLLVKDFTAEQIQVKVADDFIVIEAKHE---EK 315
S DW L+H + G + V +FE L F I VKV I+I +H+ +
Sbjct: 13 SWDWPLQH---NDGVVKVTNTSEKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDLLQNR 69
Query: 316 KDEQGFISRHFVRKYKLPQGSQPNKITSTLSADGVLKIVVPK 441
E G ++R R YKLP+ P+ + S L++ GVL I K
Sbjct: 70 PTEYGIVNREVHRTYKLPEDVDPSTVRSHLNSSGVLTITANK 111
>U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.11 protein.
Length = 145
Score = 47.6 bits (108), Expect = 2e-05
Identities = 27/88 (30%), Positives = 45/88 (51%)
Frame = +1
Query: 214 RFEXNLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLPQGSQPNKI 393
+F NL V F E +++ + + I+ + +E K E G+ + F R LP+ +
Sbjct: 49 KFAINLNVSQFKPEDLKINLDGHTLSIQGE-QELKTEHGYSKKSFSRVILLPEDVDVGAV 107
Query: 394 TSTLSADGVLKIVVPKETAVLKDTAIPV 477
S LS DG L I PK+ A+ + +IP+
Sbjct: 108 ASNLSEDGKLSIEAPKKEAI-QGRSIPI 134
>U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.1 protein.
Length = 145
Score = 47.6 bits (108), Expect = 2e-05
Identities = 27/88 (30%), Positives = 45/88 (51%)
Frame = +1
Query: 214 RFEXNLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLPQGSQPNKI 393
+F NL V F E +++ + + I+ + +E K E G+ + F R LP+ +
Sbjct: 49 KFAINLNVSQFKPEDLKINLDGHTLSIQGE-QELKTEHGYSKKSFSRVILLPEDVDVGAV 107
Query: 394 TSTLSADGVLKIVVPKETAVLKDTAIPV 477
S LS DG L I PK+ A+ + +IP+
Sbjct: 108 ASNLSEDGKLSIEAPKKEAI-QGRSIPI 134
>K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock protein
16-1a protein.
Length = 145
Score = 47.6 bits (108), Expect = 2e-05
Identities = 27/88 (30%), Positives = 45/88 (51%)
Frame = +1
Query: 214 RFEXNLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLPQGSQPNKI 393
+F NL V F E +++ + + I+ + +E K E G+ + F R LP+ +
Sbjct: 49 KFAINLNVSQFKPEDLKINLDGHTLSIQGE-QELKTEHGYSKKSFSRVILLPEDVDVGAV 107
Query: 394 TSTLSADGVLKIVVPKETAVLKDTAIPV 477
S LS DG L I PK+ A+ + +IP+
Sbjct: 108 ASNLSEDGKLSIEAPKKEAI-QGRSIPI 134
>K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock protein
16-1 protein.
Length = 146
Score = 47.6 bits (108), Expect = 2e-05
Identities = 27/88 (30%), Positives = 45/88 (51%)
Frame = +1
Query: 214 RFEXNLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLPQGSQPNKI 393
+F NL V F E +++ + + I+ + +E K E G+ + F R LP+ +
Sbjct: 50 KFAINLNVSQFKPEDLKINLDGHTLSIQGE-QELKTEHGYSKKSFSRVILLPEDVDVGAV 108
Query: 394 TSTLSADGVLKIVVPKETAVLKDTAIPV 477
S LS DG L I PK+ A+ + +IP+
Sbjct: 109 ASNLSEDGKLSIEAPKKEAI-QGRSIPI 135
>EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock
protein 12.1 protein.
Length = 112
Score = 47.6 bits (108), Expect = 2e-05
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Frame = +1
Query: 151 SVDW-LEHLPWHXGAI-VKTQKXRFEXNLLVKDFTAEQIQVKVADDFIVIEAKHE---EK 315
S DW L+H + G + V +FE L F I VKV I+I +H+ +
Sbjct: 13 SWDWPLQH---NDGVVKVTNTSEKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDLLQNR 69
Query: 316 KDEQGFISRHFVRKYKLPQGSQPNKITSTLSADGVLKIVVPK 441
E G ++R R YKLP+ P+ + S L++ GVL I K
Sbjct: 70 PTEYGIVNREVHRTYKLPEDVDPSTVRSHLNSSGVLTITANK 111
>M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 145
Score = 46.8 bits (106), Expect = 3e-05
Identities = 28/88 (31%), Positives = 44/88 (50%)
Frame = +1
Query: 214 RFEXNLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLPQGSQPNKI 393
+F NL V F E +++ + + I+ + E K D G+ + F R LP+ +
Sbjct: 49 KFAINLNVSQFKPEDLKINLDGRTLSIQGEQELKTDH-GYSKKSFSRVILLPEDVDVGAV 107
Query: 394 TSTLSADGVLKIVVPKETAVLKDTAIPV 477
S LS DG L I PK+ AV + +IP+
Sbjct: 108 ASNLSEDGKLSIEAPKKEAV-QGRSIPI 134
>AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock
protein protein 16.2 protein.
Length = 145
Score = 46.8 bits (106), Expect = 3e-05
Identities = 28/88 (31%), Positives = 44/88 (50%)
Frame = +1
Query: 214 RFEXNLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLPQGSQPNKI 393
+F NL V F E +++ + + I+ + E K D G+ + F R LP+ +
Sbjct: 49 KFAINLNVSQFKPEDLKINLDGRTLSIQGEQELKTDH-GYSKKSFSRVILLPEDVDVGAV 107
Query: 394 TSTLSADGVLKIVVPKETAVLKDTAIPV 477
S LS DG L I PK+ AV + +IP+
Sbjct: 108 ASNLSEDGKLSIEAPKKEAV-QGRSIPI 134
>M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 144
Score = 45.6 bits (103), Expect = 7e-05
Identities = 25/87 (28%), Positives = 44/87 (50%)
Frame = +1
Query: 187 GAIVKTQKXRFEXNLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKL 366
G + + +F L V F E +++K+ + IE +E K E G++ R F + L
Sbjct: 45 GEQIVNDESKFSVQLDVSHFKPENLKIKLDGRELKIEGI-QETKSEHGYLKRSFSKMILL 103
Query: 367 PQGSQPNKITSTLSADGVLKIVVPKET 447
P+ + + S +S +G L+I PK+T
Sbjct: 104 PEDADLPSVKSAISNEGKLQIEAPKKT 130
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 45.6 bits (103), Expect = 7e-05
Identities = 27/87 (31%), Positives = 45/87 (51%)
Frame = +1
Query: 187 GAIVKTQKXRFEXNLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKL 366
G IV + +F L V F E +++K+ + IE +E K E G++ R F + L
Sbjct: 45 GEIVNDES-KFSVQLDVSHFKPENLKIKLDGRELKIEGI-QETKSEHGYLKRSFSKMILL 102
Query: 367 PQGSQPNKITSTLSADGVLKIVVPKET 447
P+ + + S +S +G L+I PK+T
Sbjct: 103 PEDADLPSVKSAISNEGKLQIEAPKKT 129
>Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical
protein F43D9.4 protein.
Length = 159
Score = 45.2 bits (102), Expect = 9e-05
Identities = 27/94 (28%), Positives = 45/94 (47%)
Frame = +1
Query: 196 VKTQKXRFEXNLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLPQG 375
V+ +F L V F E+++V + + IE H E K E GF R F R++ LP+
Sbjct: 46 VENTAQKFCVKLDVAAFKPEELKVNLEGHVLTIEG-HHEVKTEHGFSKRSFTRQFTLPKD 104
Query: 376 SQPNKITSTLSADGVLKIVVPKETAVLKDTAIPV 477
I + ++ +G + I PK + A+P+
Sbjct: 105 VDLAHIHTVINKEGQMTIDAPKTGSNTTVRALPI 138
>X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C.
elegans mRNA 3'-regionfor heat shock protein hsp 16-41
(exon 2).somal genes.).
Length = 97
Score = 44.8 bits (101), Expect = 1e-04
Identities = 24/84 (28%), Positives = 43/84 (51%)
Frame = +1
Query: 196 VKTQKXRFEXNLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLPQG 375
+ + +F L V F E +++K+ + IE +E K E G++ R F + LP+
Sbjct: 1 IVNDESKFSVQLDVSHFKPENLKIKLDGRELKIEGI-QETKSEHGYLKRSFSKMILLPED 59
Query: 376 SQPNKITSTLSADGVLKIVVPKET 447
+ + S +S +G L+I PK+T
Sbjct: 60 ADLPSVKSAISNEGKLQIEAPKKT 83
>Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.3 protein.
Length = 147
Score = 44.4 bits (100), Expect = 2e-04
Identities = 26/86 (30%), Positives = 47/86 (54%)
Frame = +1
Query: 193 IVKTQKXRFEXNLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLPQ 372
IV T + +F NL V D E++++ + + I+A+H+E +++ ++ + + LP+
Sbjct: 44 IVDTHE-KFSVNLNVPDVKPEELKINLEGRKLSIKAEHQEIENDNISTTQTYSKSIVLPE 102
Query: 373 GSQPNKITSTLSADGVLKIVVPKETA 450
++S LS DG L I VPK A
Sbjct: 103 DVDVTHLSSNLSEDGKLLIEVPKVEA 128
>X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal
fragment of hsp 16-48 protein.
Length = 135
Score = 44.4 bits (100), Expect = 2e-04
Identities = 27/87 (31%), Positives = 44/87 (50%)
Frame = +1
Query: 187 GAIVKTQKXRFEXNLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKL 366
G IV + +F L V F E +++++ + IE +EKK E G+ R F + L
Sbjct: 37 GEIVNDES-KFSVQLDVSHFKPEDLKIELDGRELKIEGI-QEKKSEHGYSKRSFSKMILL 94
Query: 367 PQGSQPNKITSTLSADGVLKIVVPKET 447
P+ + S +S +G L+I PK+T
Sbjct: 95 PEDVDLTSVKSAISNEGKLQIEAPKKT 121
>U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.49 protein.
Length = 143
Score = 44.4 bits (100), Expect = 2e-04
Identities = 27/87 (31%), Positives = 44/87 (50%)
Frame = +1
Query: 187 GAIVKTQKXRFEXNLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKL 366
G IV + +F L V F E +++++ + IE +EKK E G+ R F + L
Sbjct: 45 GEIVNDES-KFSVQLDVSHFKPEDLKIELDGRELKIEGI-QEKKSEHGYSKRSFSKMILL 102
Query: 367 PQGSQPNKITSTLSADGVLKIVVPKET 447
P+ + S +S +G L+I PK+T
Sbjct: 103 PEDVDLTSVKSAISNEGKLQIEAPKKT 129
>U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.48 protein.
Length = 143
Score = 44.4 bits (100), Expect = 2e-04
Identities = 27/87 (31%), Positives = 44/87 (50%)
Frame = +1
Query: 187 GAIVKTQKXRFEXNLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKL 366
G IV + +F L V F E +++++ + IE +EKK E G+ R F + L
Sbjct: 45 GEIVNDES-KFSVQLDVSHFKPEDLKIELDGRELKIEGI-QEKKSEHGYSKRSFSKMILL 102
Query: 367 PQGSQPNKITSTLSADGVLKIVVPKET 447
P+ + S +S +G L+I PK+T
Sbjct: 103 PEDVDLTSVKSAISNEGKLQIEAPKKT 129
>K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock protein
16-48a protein.
Length = 144
Score = 44.4 bits (100), Expect = 2e-04
Identities = 25/87 (28%), Positives = 43/87 (49%)
Frame = +1
Query: 187 GAIVKTQKXRFEXNLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKL 366
G + + +F L V F E +++++ + IE +EKK E G+ R F + L
Sbjct: 45 GEQIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIEGI-QEKKSEHGYSKRSFSKMILL 103
Query: 367 PQGSQPNKITSTLSADGVLKIVVPKET 447
P+ + S +S +G L+I PK+T
Sbjct: 104 PEDVDLTSVKSAISNEGKLQIEAPKKT 130
>K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock protein
16-48 protein.
Length = 143
Score = 44.4 bits (100), Expect = 2e-04
Identities = 27/87 (31%), Positives = 44/87 (50%)
Frame = +1
Query: 187 GAIVKTQKXRFEXNLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKL 366
G IV + +F L V F E +++++ + IE +EKK E G+ R F + L
Sbjct: 45 GEIVNDES-KFSVQLDVSHFKPEDLKIELDGRELKIEGI-QEKKSEHGYSKRSFSKMILL 102
Query: 367 PQGSQPNKITSTLSADGVLKIVVPKET 447
P+ + S +S +G L+I PK+T
Sbjct: 103 PEDVDLTSVKSAISNEGKLQIEAPKKT 129
>Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.4 protein.
Length = 147
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/94 (27%), Positives = 45/94 (47%)
Frame = +1
Query: 196 VKTQKXRFEXNLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLPQG 375
+ +F NL V +F E+++V + + I+ +H+ + +E G + F R LP+
Sbjct: 45 IMNSNDKFAVNLNVSNFKPEELKVNLEGRQLSIQGEHDVE-NEHGASRKSFSRMILLPED 103
Query: 376 SQPNKITSTLSADGVLKIVVPKETAVLKDTAIPV 477
+ + LS DG L I PK V ++PV
Sbjct: 104 VDITSVATNLSNDGKLCIEAPKLEGVC-GRSVPV 136
>Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 38.3 bits (85), Expect = 0.010
Identities = 26/81 (32%), Positives = 37/81 (45%)
Frame = +1
Query: 187 GAIVKTQKXRFEXNLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKL 366
G I T F + V F E+I+V + DD + I + E + + R F RKY +
Sbjct: 95 GEITNTSHG-FTIEIDVFHFMPEEIKVVLTDDTLSISGERFESTGDGHTLRRSFSRKYSI 153
Query: 367 PQGSQPNKITSTLSADGVLKI 429
P + I S L+ GVL I
Sbjct: 154 PDDVHLDTIRSHLTNSGVLII 174
>Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 38.3 bits (85), Expect = 0.010
Identities = 26/81 (32%), Positives = 37/81 (45%)
Frame = +1
Query: 187 GAIVKTQKXRFEXNLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKL 366
G I T F + V F E+I+V + DD + I + E + + R F RKY +
Sbjct: 95 GEITNTSHG-FTIEIDVFHFMPEEIKVVLTDDTLSISGERFESTGDGHTLRRSFSRKYSI 153
Query: 367 PQGSQPNKITSTLSADGVLKI 429
P + I S L+ GVL I
Sbjct: 154 PDDVHLDTIRSHLTNSGVLII 174
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,586,928
Number of Sequences: 27780
Number of extensions: 367598
Number of successful extensions: 728
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3234681980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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