Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_K08
         (1234 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    30   0.031
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    30   0.031
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   4.7  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   4.7  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   6.2  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 30.3 bits (65), Expect = 0.031
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = +1

Query: 517 VQNLSGGELQRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAK 678
           ++ +SGGE +R++    +     +   DEP++ LDS   L   +V+K   +  K
Sbjct: 217 IKGISGGEKKRLSFAAEVLTNPKLMFCDEPTSGLDSFMALTVMQVLKEMAMTGK 270


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 30.3 bits (65), Expect = 0.031
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = +1

Query: 517 VQNLSGGELQRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAK 678
           ++ +SGGE +R++    +     +   DEP++ LDS   L   +V+K   +  K
Sbjct: 217 IKGISGGEKKRLSFAAEVLTNPKLMFCDEPTSGLDSFMALTVMQVLKEMAMTGK 270


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 307 LKYAESXSSPEGSGQLPQLHISYK 378
           +K+     +P G  +LP L IS K
Sbjct: 352 IKHTSCIPTPNGDSRLPPLEISLK 375


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 307 LKYAESXSSPEGSGQLPQLHISYK 378
           +K+     +P G  +LP L IS K
Sbjct: 352 IKHTSCIPTPNGDSRLPPLEISLK 375


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = +1

Query: 280 FFHPVFQKCLKYAESXSSPEGSGQLPQL 363
           FFHP        A S  SP    +LP L
Sbjct: 56  FFHPGLLPLAWQANSPPSPPAPSELPAL 83


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,007
Number of Sequences: 336
Number of extensions: 3896
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 36069111
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)