Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_K06
(1220 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 227 3e-58
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 117 7e-25
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 94 8e-18
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 90 1e-16
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 88 5e-16
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 77 9e-13
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 67 8e-10
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 54 6e-06
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 54 1e-05
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 53 1e-05
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 52 4e-05
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 49 3e-04
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 38 0.53
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 38 0.53
UniRef50_A4LA78 Cluster: Putative uncharacterized protein; n=1; ... 36 2.1
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 36 2.8
UniRef50_UPI0000EBD39C Cluster: PREDICTED: hypothetical protein;... 34 6.5
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 227 bits (556), Expect = 3e-58
Identities = 106/122 (86%), Positives = 107/122 (87%)
Frame = +1
Query: 538 SKRPXTVKRPRCWRFXIGSAPLTSITKIDAQVXGGXTRQDYKXTRRFPLXAPSCALLFRP 717
SK+ T R RF IGSAPLTSITKIDAQV GG TRQDYK TRRFPL APSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 718 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFXPTGAPYPVTIVLSP 897
CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPF PT APYPVTIVLSP
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSP 121
Query: 898 TR 903
TR
Sbjct: 122 TR 123
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 117 bits (281), Expect = 7e-25
Identities = 68/116 (58%), Positives = 73/116 (62%)
Frame = +1
Query: 382 VCVLGALPLPRSLTRCARSFGCGXRYQLTQRR*YGYPXNQGITQEXTCXQKASKRPXTVK 561
+C G +PLPRSLTR ARSFGCG RY+LT G E T + SK
Sbjct: 30 ICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEEI--- 77
Query: 562 RPRCWRFXIGSAPLTSITKIDAQVXGGXTRQDYKXTRRFPLXAPSCALLFRPCRLP 729
RPR RF IGSAPLTSI K DAQ+ GG TRQDYK RRFPL APSCALLF P LP
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 93.9 bits (223), Expect = 8e-18
Identities = 45/75 (60%), Positives = 53/75 (70%)
Frame = -3
Query: 903 PGWTQDDSYRIRRTGRXERGVXAHSPAWSERPTPX*DTYSVSYEKAPRFPKGERRTGIR* 724
PGWTQDDSYR R+ R ERGV A+SPAWSERP P DT SVSYEKAPRFPKG++ +
Sbjct: 8 PGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQV-- 65
Query: 723 XAGSEQESARGSXQG 679
+G Q R + +G
Sbjct: 66 -SGKRQGRNRRAHEG 79
Score = 41.5 bits (93), Expect = 0.043
Identities = 22/40 (55%), Positives = 23/40 (57%)
Frame = -1
Query: 749 EKGGQVSGXRQGRNRRAHEGAXRGKRLVXL*SCRVXPPXT 630
+K QVSG RQGRNRRAHEGA K L PP T
Sbjct: 60 KKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 89.8 bits (213), Expect = 1e-16
Identities = 49/103 (47%), Positives = 52/103 (50%)
Frame = +1
Query: 631 VXGGXTRQDYKXTRRFPLXAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCR 810
V G TRQD K P P PPFSL + + GIS RCR
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 811 SFAPSWAVCTNPPFXPTGAPYPVTIVLSPTR*XRLIXTGXXHW 939
SFAPSWAV NPPF PT APYPVT+ LSPTR TG HW
Sbjct: 83 SFAPSWAVSKNPPFSPTAAPYPVTVHLSPTRKSTQNATGSSHW 125
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 87.8 bits (208), Expect = 5e-16
Identities = 42/54 (77%), Positives = 44/54 (81%)
Frame = +1
Query: 556 VKRPRCWRFXIGSAPLTSITKIDAQVXGGXTRQDYKXTRRFPLXAPSCALLFRP 717
V+ PR RF IGSAPLTSITK DAQ+ GG TRQDYK TRRFPL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 77.0 bits (181), Expect = 9e-13
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = -3
Query: 906 LPGWTQDDSYRIRRTGRXERGVXAHSPAWSERPTP 802
LPGWTQDDSYRIRR+GR ERGV AHSPAWSERPTP
Sbjct: 7 LPGWTQDDSYRIRRSGRAERGVRAHSPAWSERPTP 41
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 67.3 bits (157), Expect = 8e-10
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = -3
Query: 903 PGWTQDDSYRIRRTGRXERGVXAHSPAWSERPTPX*DT 790
PGWTQ +SYRIRR+ R ERGV A+SPAWSERPTP DT
Sbjct: 8 PGWTQVNSYRIRRSSRAERGVLAYSPAWSERPTPSRDT 45
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 54.4 bits (125), Expect = 6e-06
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +3
Query: 729 GYLSAFLPSGSVALSHSSRCRYLSXV 806
GYLSAFLPSGSVALSHSSRCRYLS V
Sbjct: 12 GYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 53.6 bits (123), Expect = 1e-05
Identities = 30/57 (52%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 346 CINESANARGXAVCVLGALPLPRSLTRCARSFGCGXRYQL-TQRR*YGYPXNQGITQ 513
CI + A AR AV VL ALPL RS TRC RS GCG + R YG P QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 53.2 bits (122), Expect = 1e-05
Identities = 34/105 (32%), Positives = 45/105 (42%)
Frame = +1
Query: 403 PLPRSLTRCARSFGCGXRYQLTQRR*YGYPXNQGITQEXTCXQKASKRPXTVKRPRCWRF 582
PLP C C L + +P N I + + + + P T F
Sbjct: 14 PLPNKTRYCCHRQQC----LLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLF 69
Query: 583 XIGSAPLTSITKIDAQVXGGXTRQDYKXTRRFPLXAPSCALLFRP 717
S PLT+ITKI Q T+ +YK T FPL +PS +LLF P
Sbjct: 70 PYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 51.6 bits (118), Expect = 4e-05
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = +3
Query: 834 VHXPPVXPDRCALSGNYRLESNPV 905
+H PPV PDRCALSGNYRLESNPV
Sbjct: 1 MHEPPVQPDRCALSGNYRLESNPV 24
Score = 39.9 bits (89), Expect = 0.13
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +2
Query: 899 PGKXDLSPLAXXTGNRIXKXRXXGGATXF----XNGGLTTXTLKXXXWVSAXAXPXXFXK 1066
P + DLSPLA TGNRI + R GGAT F N G T T+ + A P F K
Sbjct: 23 PVRHDLSPLAAATGNRISRARYVGGATEFLKWWPNYGYTRRTV---FGICALLKPVTFGK 79
Query: 1067 KL 1072
++
Sbjct: 80 RV 81
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 48.8 bits (111), Expect = 3e-04
Identities = 22/32 (68%), Positives = 22/32 (68%)
Frame = -3
Query: 546 PFAGLLXTCXFLXYPLIXWITVLPPLSELIPL 451
P L TC F YPLI WITVLPPLSEL PL
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPL 50
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 37.9 bits (84), Expect = 0.53
Identities = 20/37 (54%), Positives = 20/37 (54%)
Frame = +3
Query: 414 LTDXXXXXXXXXXXXXXHSKAVIRLSTXSGDNXGXNM 524
LTD HSKAVIRLST SGDN G NM
Sbjct: 23 LTDSLRSVVRLRRAVSAHSKAVIRLSTESGDNAGKNM 59
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 37.9 bits (84), Expect = 0.53
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = -1
Query: 416 ERGSGRAPNTQTAXPRALADSLMQ 345
+R + APNTQTA PRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A4LA78 Cluster: Putative uncharacterized protein; n=1;
Edwardsiella tarda|Rep: Putative uncharacterized protein
- Edwardsiella tarda
Length = 99
Score = 35.9 bits (79), Expect = 2.1
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +1
Query: 835 CTNPPFXPTGAPYPVTIVLSPTR*XRLIXTGXXHW 939
CTN PF PT P VT++L+PT L T HW
Sbjct: 68 CTNSPFSPTITPVQVTVLLNPT----LTDTQKRHW 98
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 35.5 bits (78), Expect = 2.8
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2
Query: 347 ALMNRPTXGXRRFAYW 394
ALMNRPT G RRFAYW
Sbjct: 26 ALMNRPTRGERRFAYW 41
>UniRef50_UPI0000EBD39C Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 198
Score = 34.3 bits (75), Expect = 6.5
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = -3
Query: 900 GWTQDDSYRIRRTGRXERGVXAHSPAWSERPTPX*DTYSVSYEKAPRFPKGERRTG 733
GW + + + R GR +R +PAW P D+ V+ + PR P RR G
Sbjct: 143 GWPRAEVVEVGRLGRGQRARRRDAPAWVRPREPRSDSSPVT-GRGPRAPSPTRRPG 197
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 785,736,887
Number of Sequences: 1657284
Number of extensions: 12020178
Number of successful extensions: 22020
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 21153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22015
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 123604589072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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