Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_K05
         (1187 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    88   1e-19
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    25   0.99 
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    24   2.3  
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    24   3.0  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    24   3.0  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   5.3  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    23   7.0  

>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 88.2 bits (209), Expect = 1e-19
 Identities = 56/202 (27%), Positives = 106/202 (52%), Gaps = 9/202 (4%)
 Frame = +3

Query: 66  ESWKGKIVLITGAASGIGEGVVRLILERGVKHVAILDVAEDSGRALENELNTKYGPNSVK 245
           ++W  ++ L+TGA SGIG+ ++  ++ +G+K + I     D  + L  EL +K  P  + 
Sbjct: 3   QNWIDEVALVTGANSGIGKCLIECLVGKGMKVIGIAPQV-DKMKTLVEELKSK--PGKLV 59

Query: 246 FYKCDVTDEELFLELFDTVKNEQGYLDVVINNAAI------MNDSYKSYKKQIDINVTAL 407
             +CD++++   L++ + V+   G +D++INNA I       ND    +KK  DIN+  L
Sbjct: 60  PLQCDLSNQNDILKVIEWVEKNLGAIDILINNATINIDVTLQNDEVLDWKKIFDINLLGL 119

Query: 408 VTGTLKAIEIMGKQNGGKGGTVLNI---SSVAALCQSHLFPIYFGTKSAVLQFSNCIGLE 578
                + +++M K+ G   G ++NI   S +  L  +   P Y  +K A+   ++C+  E
Sbjct: 120 TCMIQEVLKLM-KKKGINNGIIVNINDASGLNLLPMNRNRPAYLASKCALTTLTDCLRSE 178

Query: 579 EHYAKSGVRVLSICFGATDTPL 644
               +S ++V+SI     +T +
Sbjct: 179 LAQCESNIKVISISPDLVETDM 200


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 25.4 bits (53), Expect = 0.99
 Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = +3

Query: 210 ELNTKYGPNSVKFYKCDVTDEELFLELFDTVKNEQGYLDVVINNAAIMNDS-YKSYKKQI 386
           E   K   N  ++ K   T +E F +  +  ++++  +   ++N  I N++ YK+Y K++
Sbjct: 277 EREQKSYKNEREYRKYRETSKERFRDRRERERSKESKIISSLSNKTIHNNNNYKNYNKKL 336

Query: 387 DINV 398
             N+
Sbjct: 337 YYNI 340


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -1

Query: 839 NCISDVLRRFVCCDDPSVATFSVLIGL 759
           +CI ++L       DPS A FS  IGL
Sbjct: 335 DCIHELLGHMPLLADPSFAQFSQEIGL 361


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 762 AYEHTKSGDTWIITTNKPAKNITDTVK 842
           ++E +K+GD W  T++      T T K
Sbjct: 36  SFELSKNGDEWTFTSSSGDNTYTKTFK 62


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 762 AYEHTKSGDTWIITTNKPAKNITDTVK 842
           ++E +K+GD W  T++      T T K
Sbjct: 38  SFELSKNGDEWTFTSSSGDNTYTKTFK 64


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 405 LVTGTLKAIEIMGKQNGGKGGTVLNISSVAAL 500
           +VTG      ++G  NGG GG +   S ++A+
Sbjct: 30  VVTGASGGSIVVGANNGGGGGGLGIASGLSAM 61


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -2

Query: 484 DIFRTVPPLPPFCFPIISIAFSVPVTKAVTF 392
           + F+  PPL  F    +    +V V KAVTF
Sbjct: 413 EAFQEFPPLGRFAVRDMRQTVAVGVIKAVTF 443


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 297,973
Number of Sequences: 438
Number of extensions: 6557
Number of successful extensions: 22
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 40488336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)