Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_K04
         (1195 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    25   1.5  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    25   1.5  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    23   3.4  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    22   7.9  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   7.9  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +2

Query: 527 YFHKNTFTPVEYKGT 571
           YF KN   PVE KGT
Sbjct: 481 YFQKNKIGPVETKGT 495


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +2

Query: 527 YFHKNTFTPVEYKGT 571
           YF KN   PVE KGT
Sbjct: 206 YFQKNKIGPVETKGT 220


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = -1

Query: 445 FGVLGINQLCQF 410
           +GV+G N++C+F
Sbjct: 291 YGVMGFNEICEF 302


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 442 GVLGINQLCQF 410
           GVLG N++C F
Sbjct: 280 GVLGFNEICSF 290


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +2

Query: 362 YAPWCRHCTEFYPIWSE 412
           Y P+ R+C   YP++++
Sbjct: 252 YVPFYRYCYRPYPVYNQ 268


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 246,368
Number of Sequences: 336
Number of extensions: 5328
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 34733218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)