Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_K04
(1195 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 95 2e-20
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 62 1e-10
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 57 6e-09
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 51 4e-07
SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ... 41 3e-04
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 32 0.14
SPCC1840.08c |||protein disulfide isomerase |Schizosaccharomyces... 28 2.2
SPAC1952.07 |rad1||checkpoint clamp complex protein Rad1|Schizos... 28 2.2
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 27 5.1
SPAC144.06 |apl5||AP-3 adaptor complex subunit Apl5 |Schizosacch... 26 9.0
SPBC17D1.02 |||diphthamide biosynthesis protein |Schizosaccharom... 26 9.0
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 94.7 bits (225), Expect = 2e-20
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
Frame = +2
Query: 344 GNFIMFYAPWCRHCTEFYPIWSELAELVNTKDSKFAIAQVDCTVHAKLCHENEITGYPTL 523
G I FYA WC HC P++ EL L + I ++D H+ + + ITG+PTL
Sbjct: 41 GALIEFYATWCGHCKSLAPVYEELGALFEDHNDVL-IGKIDADTHSDVADKYHITGFPTL 99
Query: 524 FYFHKNTFTPVEYKGTRDLPSLTLFLSEAFSVKTEGKQSKQPNEVKTYSGMSYLNDLNIE 703
+F + PV+Y RD+ SLT F+SE +K ++ S + L+ LN +
Sbjct: 100 IWFPPDGSEPVQYSNARDVDSLTQFVSEKTGIK--------KRKIVLPSNVVELDSLNFD 151
Query: 704 KFV--SKGQHFIMFFVPWCRASQRMAPIWADLAVHYAHNNYIKIGKVN 841
K V K + F+ WC +R+AP + L + + ++I K+N
Sbjct: 152 KVVMDDKKDVLVEFYADWCGYCKRLAPTYETLGKVFKNEPNVEIVKIN 199
Score = 44.4 bits (100), Expect = 3e-05
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = +2
Query: 683 LNDLNIEKFVSKGQHFIMFFVPWCRASQRMAPIWADLAVHYAHNNYIKIGKVNCMDNEIT 862
LN+L SK I F+ WC + +AP++ +L + +N + IGK++ +
Sbjct: 28 LNELENTIRASKKGALIEFYATWCGHCKSLAPVYEELGALFEDHNDVLIGKIDADTHSDV 87
Query: 863 CKNFEVKQYPYLLW 904
+ + +P L+W
Sbjct: 88 ADKYHITGFPTLIW 101
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 62.5 bits (145), Expect = 1e-10
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Frame = +2
Query: 353 IMFYAPWCRHCTEFYPIWSELAELVNTKDSKFAIAQVDCTVHAKLCHENEITGYPTLFYF 532
+ FYAPWC HC P + +LAE + DS +A++D T + I+G+PT+ +F
Sbjct: 378 VEFYAPWCGHCKNLAPTYEKLAE-EYSDDSNVVVAKIDATEND---ISVSISGFPTIMFF 433
Query: 533 HKN-TFTPVEYKGTRDLPSLTLFLSEAFSVKTEGKQSK 643
N PV Y+G R L L+ F+ + S + K+ +
Sbjct: 434 KANDKVNPVRYEGDRTLEDLSAFIDKHASFEPIKKEKE 471
Score = 60.9 bits (141), Expect = 3e-10
Identities = 32/83 (38%), Positives = 43/83 (51%)
Frame = +2
Query: 353 IMFYAPWCRHCTEFYPIWSELAELVNTKDSKFAIAQVDCTVHAKLCHENEITGYPTLFYF 532
+ FYAPWC HC P + A+ + KD ++ +VDCT LC E I GYPTL F
Sbjct: 44 VKFYAPWCGHCKALAPEYESAADELE-KDG-ISLVEVDCTEEGDLCSEYSIRGYPTLNVF 101
Query: 533 HKNTFTPVEYKGTRDLPSLTLFL 601
KN +Y G R +L ++
Sbjct: 102 -KNGKQISQYSGPRKHDALVKYM 123
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +2
Query: 731 IMFFVPWCRASQRMAPIWADLAVHYAHNNYIKIGKVNCMDNEITCKNFEVKQYPYLLWXV 910
+ F+ PWC + +AP + + A + I + +V+C + C + ++ YP L
Sbjct: 44 VKFYAPWCGHCKALAPEY-ESAADELEKDGISLVEVDCTEEGDLCSEYSIRGYPTLNVFK 102
Query: 911 NGKIMGASNGENLXD 955
NGK + +G D
Sbjct: 103 NGKQISQYSGPRKHD 117
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/85 (22%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = +2
Query: 731 IMFFVPWCRASQRMAPIWADLAVHYAHNNYIKIGKVNCMDNEITCKNFEVKQYPYLL-WX 907
+ F+ PWC + +AP + LA Y+ ++ + + K++ +N+I + + +P ++ +
Sbjct: 378 VEFYAPWCGHCKNLAPTYEKLAEEYSDDSNVVVAKIDATENDI---SVSISGFPTIMFFK 434
Query: 908 VNGKI--MGASNGENLXDWKALVEK 976
N K+ + L D A ++K
Sbjct: 435 ANDKVNPVRYEGDRTLEDLSAFIDK 459
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 56.8 bits (131), Expect = 6e-09
Identities = 30/120 (25%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Frame = +2
Query: 287 SSVYXYNPSNFKFQXEXMDGNFIMFYAPWCRHCTEFYPIWSELAELVNTKDSKFAIAQVD 466
S+ N NF+ + + ++FYAPWC +C + P + +LA ++ S + VD
Sbjct: 31 SNTIELNSKNFRKFVKAKGPSLVVFYAPWCGYCKKLVPTYQKLASNLH---SLLPVTAVD 87
Query: 467 CTV--HAKLCHENEITGYPTLFYFHK----NTFTPVEYKGTRDLPSLTLFLSEAFSVKTE 628
C + +C + ++ G+PT+ + ++ + +Y G R SL F+S++ K +
Sbjct: 88 CDADQNRAVCSQYQVQGFPTIKLVYPSSKGSSLSSTDYNGDRSYKSLQKFVSDSIPSKVK 147
Score = 44.0 bits (99), Expect = 4e-05
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +2
Query: 683 LNDLNIEKFV-SKGQHFIMFFVPWCRASQRMAPIWADLAVHYAHNNYIKIGKVNC--MDN 853
LN N KFV +KG ++F+ PWC +++ P + LA + ++ + + V+C N
Sbjct: 36 LNSKNFRKFVKAKGPSLVVFYAPWCGYCKKLVPTYQKLASNL--HSLLPVTAVDCDADQN 93
Query: 854 EITCKNFEVKQYP 892
C ++V+ +P
Sbjct: 94 RAVCSQYQVQGFP 106
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 50.8 bits (116), Expect = 4e-07
Identities = 28/90 (31%), Positives = 41/90 (45%)
Frame = +2
Query: 341 DGNFIMFYAPWCRHCTEFYPIWSELAELVNTKDSKFAIAQVDCTVHAKLCHENEITGYPT 520
+G FI FY+ C C + W +A N K +A ++C V + C + I +PT
Sbjct: 299 EGWFIQFYSSECDDCDDVSTAWYAMA---NRMRGKLNVAHINCAVSKRACKQYSIQYFPT 355
Query: 521 LFYFHKNTFTPVEYKGTRDLPSLTLFLSEA 610
+F + F VEY G + L F EA
Sbjct: 356 FLFFKEEAF--VEYVGLPNEGDLVSFAEEA 383
Score = 48.4 bits (110), Expect = 2e-06
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Frame = +2
Query: 683 LNDLNIEKFVSKGQHFIMFFVPWCRASQRMAPIWADL---AVHYAHNNYIKIGKVNCMDN 853
L D ++E VSKG FI +++P C A +R+ P+W ++ A + G+V+C
Sbjct: 31 LTDNDLESEVSKGTWFIKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSKE 90
Query: 854 EITCKNFEVKQYPYLLWXVNGKIM 925
+C N ++ P L NG+I+
Sbjct: 91 LSSCAN--IRAVPTLYLYQNGEIV 112
Score = 38.3 bits (85), Expect = 0.002
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = +2
Query: 350 FIMFYAPWCRHCTEFYPIWSELAELV--NTKDSKFAIAQVDCTVHAKLCHENEITGYPTL 523
FI +Y P C C P+W + E + S F +VDC+ C I PTL
Sbjct: 46 FIKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSKELSSC--ANIRAVPTL 103
Query: 524 FYF 532
+ +
Sbjct: 104 YLY 106
Score = 28.7 bits (61), Expect = 1.7
Identities = 20/108 (18%), Positives = 41/108 (37%)
Frame = +2
Query: 581 PSLTLFLSEAFSVKTEGKQSKQPNEVKTYSGMSYLNDLNIEKFVSKGQHFIMFFVPWCRA 760
PS E + + + K N T ++ D++ K FI F+ C
Sbjct: 254 PSFPKEKEEKENTEETEESKKSINPTGTSKALALDADIDAA-LTDKEGWFIQFYSSECDD 312
Query: 761 SQRMAPIWADLAVHYAHNNYIKIGKVNCMDNEITCKNFEVKQYPYLLW 904
++ W +A + + +NC ++ CK + ++ +P L+
Sbjct: 313 CDDVSTAWYAMANRM--RGKLNVAHINCAVSKRACKQYSIQYFPTFLF 358
>SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 41.1 bits (92), Expect = 3e-04
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +2
Query: 305 NPSNFKFQXEXMDGN--FIMFYA-PWCRHCTEFYPIWSELAELVNTKDSKFAIAQVDCTV 475
N F F E M F+MF + C C + +WS + NT D + +AQV+C
Sbjct: 183 NFKRFLFGNEIMSKTRAFVMFVSLKHCEDCFHWEAVWSSITR--NT-DERLKMAQVNCDE 239
Query: 476 HAKLCHENEITGYPTLFYFHKNTFTPVEYKGTRDLPSLTLFLSEAFS 616
++C+ I +PT F F ++Y G L + ++ S
Sbjct: 240 EKEMCNHFHIKKFPTFRVF--QGFDSIQYNGPLKYQQLLSYSNQVAS 284
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 32.3 bits (70), Expect = 0.14
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +2
Query: 359 FYAPWCRHCTEFYPIWSELAELVNTKDSKFAIAQVDCTVHAKLCHENEITGYPTLFYFHK 538
FYA WC C P +L+E ++ K + V+ + + +N + PT+ F K
Sbjct: 42 FYADWCGPCKYLKPFLEKLSE----QNQKASFIAVNADKFSDIAQKNGVYALPTMVLFRK 97
>SPCC1840.08c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 561
Score = 28.3 bits (60), Expect = 2.2
Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = +2
Query: 314 NFKFQXEXMDGNFIMFYAPWCRHCTEFYP-IWSELAELVNTKDSKFAIAQVDCTVHAKLC 490
N +F F++F + FY + + +L +K VDC + C
Sbjct: 109 NSEFFLSHRQHGFVLFIDSKKKPRQSFYTDSATSIVQLSKKYRNKIKFKSVDCASSLEKC 168
Query: 491 HENEITGYPTLFYFH 535
E I +P+L Y++
Sbjct: 169 EEIGINSFPSLVYYN 183
>SPAC1952.07 |rad1||checkpoint clamp complex protein
Rad1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 323
Score = 28.3 bits (60), Expect = 2.2
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 712 VKRTAFHHVFCTLVSCLSEDGTDLGRLSSTLRSQQLHK-NW 831
V+ A + C L++ ED D+ RL+STL ++ + K NW
Sbjct: 127 VEEMAGYATACELLTMECEDDVDINRLASTLCTKIIMKSNW 167
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/59 (20%), Positives = 27/59 (45%)
Frame = +2
Query: 359 FYAPWCRHCTEFYPIWSELAELVNTKDSKFAIAQVDCTVHAKLCHENEITGYPTLFYFH 535
FYAPW C + ++ + A+ +TK++ F +++ + + ++ P H
Sbjct: 27 FYAPWAAPCKQMNQVFDQFAK--DTKNAVF--LKIEAEKFSDIAESFDVNAVPLFVLIH 81
>SPAC144.06 |apl5||AP-3 adaptor complex subunit Apl5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 26.2 bits (55), Expect = 9.0
Identities = 8/22 (36%), Positives = 18/22 (81%)
Frame = +2
Query: 377 RHCTEFYPIWSELAELVNTKDS 442
R +EFY ++++++++VNT D+
Sbjct: 566 RRASEFYILFNQVSDIVNTSDT 587
>SPBC17D1.02 |||diphthamide biosynthesis protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 503
Score = 26.2 bits (55), Expect = 9.0
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 623 TEGKQSKQPNEVKTYSGMSYLNDLNIEKFVS 715
+EGKQSK+P+EV T L KFV+
Sbjct: 380 SEGKQSKEPSEVLTEESAEPHFSLITGKFVN 410
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,218,123
Number of Sequences: 5004
Number of extensions: 83341
Number of successful extensions: 236
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 231
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 643474786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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