Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_K03
(1167 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 25 1.1
S78567-1|AAB34900.1| 141|Tribolium castaneum GABA receptor subu... 25 1.5
AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory recept... 24 2.5
AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory recept... 24 2.5
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 23 5.9
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 23 5.9
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 23 5.9
EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 22 7.7
DQ659251-1|ABG47449.1| 366|Tribolium castaneum chitinase 11 pro... 22 7.7
AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 22 7.7
>EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering
hormone receptorisoform A protein.
Length = 434
Score = 25.0 bits (52), Expect = 1.1
Identities = 27/143 (18%), Positives = 53/143 (37%), Gaps = 2/143 (1%)
Frame = -2
Query: 665 LCISFSGSWTSVFVVLCGLNCLITLALVLCSVLLTIYLTWGISSILIRSSGVIESFSGSK 486
L ISF + + G C T A ++C + I + ++I ++ F GSK
Sbjct: 162 LAISFERYYAICKPLKAGYICTKTRASLICLLAWFIAALFTSPMLVIAEYKQLDYFDGSK 221
Query: 485 ILIFFSW-NVFWVNI-FRTXXXXXXXXXXXSVDCLIVPVHSNSCTDCLSIPFSFIFSNIR 312
+ + N FW + F T + L + N ++ ++ + NI
Sbjct: 222 VPACHTLANTFWSALYFLTIIFLFFIIPLIILLILYCIIAKNLMSNAATLVLNKHIDNIS 281
Query: 311 HASSSSCFAFNSDKILSYKICIL 243
+ +LS+ +C++
Sbjct: 282 LRARKQVVLMLGTVVLSFFLCLI 304
>S78567-1|AAB34900.1| 141|Tribolium castaneum GABA receptor subunit
protein.
Length = 141
Score = 24.6 bits (51), Expect = 1.5
Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = -2
Query: 527 IRSSG--VIESFSGSKILIFFSWNVFWVN 447
+RS G +I+ + S +++ SW FW+N
Sbjct: 64 VRSMGYYLIQIYIPSGLIVIISWVSFWLN 92
>AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory receptor
candidate 56 protein.
Length = 358
Score = 23.8 bits (49), Expect = 2.5
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -3
Query: 712 EVWQQSPPIFYICSFLFVFPF 650
+V+ P+FY+C+F + P+
Sbjct: 15 DVYTAIHPLFYVCTFFGLAPY 35
>AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory receptor
candidate 21 protein.
Length = 386
Score = 23.8 bits (49), Expect = 2.5
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -3
Query: 712 EVWQQSPPIFYICSFLFVFPF 650
+V+ P+FY+C+F + P+
Sbjct: 15 DVYTAIHPLFYVCTFFGLAPY 35
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 22.6 bits (46), Expect = 5.9
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +1
Query: 832 SMAGVKMSQLPLDLSRFGSYRDTNSDDYESDAEGSDXEVHDEE 960
S +G + +L L L S + DD + + +D + DEE
Sbjct: 162 SPSGQHLQELGLRLEDANSDEQDDGDDGQGSSTNNDEDDDDEE 204
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 22.6 bits (46), Expect = 5.9
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +1
Query: 832 SMAGVKMSQLPLDLSRFGSYRDTNSDDYESDAEGSDXEVHDEE 960
S +G + +L L L S + DD + + +D + DEE
Sbjct: 162 SPSGQHLQELGLRLEDANSDEQDDGDDGQGSSTNNDEDDDDEE 204
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 22.6 bits (46), Expect = 5.9
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +1
Query: 832 SMAGVKMSQLPLDLSRFGSYRDTNSDDYESDAEGSDXEVHDEE 960
S +G + +L L L S + DD + + +D + DEE
Sbjct: 162 SPSGQHLQELGLRLEDANSDEQDDGDDGQGSSTNNDEDDDDEE 204
>EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering
hormone receptorisoform B protein.
Length = 451
Score = 22.2 bits (45), Expect = 7.7
Identities = 17/66 (25%), Positives = 26/66 (39%)
Frame = -2
Query: 665 LCISFSGSWTSVFVVLCGLNCLITLALVLCSVLLTIYLTWGISSILIRSSGVIESFSGSK 486
L ISF + + G C T A ++C + I + + I G E GS
Sbjct: 162 LAISFERYYAICKPLKAGYICTKTRASLICLLAWFIAALFTSPILAITQYGPEEYVDGSI 221
Query: 485 ILIFFS 468
+ + FS
Sbjct: 222 VFVCFS 227
>DQ659251-1|ABG47449.1| 366|Tribolium castaneum chitinase 11
protein.
Length = 366
Score = 22.2 bits (45), Expect = 7.7
Identities = 11/39 (28%), Positives = 16/39 (41%)
Frame = -2
Query: 647 GSWTSVFVVLCGLNCLITLALVLCSVLLTIYLTWGISSI 531
G W + +L G+ L L S L+ + WG I
Sbjct: 103 GGWNAGNAILNGIVASSKLRASLISSCLSFFSQWGYDGI 141
>AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle
nuclear receptor protein.
Length = 407
Score = 22.2 bits (45), Expect = 7.7
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +1
Query: 217 ISKLSDKGAKIQILYDKILSELKAKQEE 300
++K + + +YD++LSEL K +E
Sbjct: 278 VNKSTAHAVGVGNIYDRVLSELVNKMKE 305
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 253,379
Number of Sequences: 336
Number of extensions: 5777
Number of successful extensions: 22
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 34022010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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