Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_K03
         (1167 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0226 + 15887835-15891188                                         31   1.3  
01_06_0418 + 29210310-29210612,29211154-29211541,29211946-292121...    30   4.0  
10_08_0302 - 16626622-16626624,16626809-16628761,16631452-16631655     29   5.3  
02_05_0935 - 32859353-32859360,32859476-32860438,32860535-32860757     29   5.3  
01_01_0610 + 4533141-4533310,4534889-4535075,4535232-4535323,453...    29   7.1  
06_02_0323 + 14381803-14382091,14382116-14382348,14382364-143824...    29   9.3  
03_06_0579 + 34870958-34874578                                         29   9.3  

>12_02_0226 + 15887835-15891188
          Length = 1117

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 259 YDKILSELKAKQEEEDACRMFENMKLNGIDKQSV 360
           Y +++  L A  + E ACR++E M+ NGI+   V
Sbjct: 488 YTQLMQHLFAFDQHEAACRLYEEMQENGIEPDVV 521


>01_06_0418 +
           29210310-29210612,29211154-29211541,29211946-29212143,
           29212626-29213092,29213210-29213749,29214275-29214477,
           29214567-29214624
          Length = 718

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 17/54 (31%), Positives = 22/54 (40%)
 Frame = +1

Query: 619 KTTNTDVHDPEKEIQRGKNKCKKWEVTAATPPPTIHGPAKILSIEDSLKLQQEH 780
           KTT     +P +    G  KCK W VT  T   T+        + D L +  EH
Sbjct: 625 KTTRVQTEEPVQTYVCGAVKCKMWPVTPQTSLTTVEKIMDSYGV-DQLPVVSEH 677


>10_08_0302 - 16626622-16626624,16626809-16628761,16631452-16631655
          Length = 719

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 20/60 (33%), Positives = 28/60 (46%)
 Frame = -2

Query: 827 SLSAACNAFTSLRRKLCSCWSFNESSIDNIFAGPCIVGGGVAAVTSHFLHLFFPLCISFS 648
           S++A+  A  +  R+L  C S + + I  I  G    G G A  T+   H F   CIS S
Sbjct: 44  SVAASPPAHVASSRRLSRCGSRSSTKICAICLGGMCSGNGQALFTAECSHKFHFHCISSS 103


>02_05_0935 - 32859353-32859360,32859476-32860438,32860535-32860757
          Length = 397

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
 Frame = +1

Query: 649 EKEIQRGKNKCKK-WEVTAATPPP 717
           EK + RGKN+ +K  E++ ATPPP
Sbjct: 118 EKHMHRGKNRSRKPVEMSLATPPP 141


>01_01_0610 +
           4533141-4533310,4534889-4535075,4535232-4535323,
           4536203-4536308,4536441-4536649,4537049-4537091,
           4537413-4537645,4537762-4538233
          Length = 503

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 15/55 (27%), Positives = 29/55 (52%)
 Frame = +1

Query: 796 EVNALHAAERLASMAGVKMSQLPLDLSRFGSYRDTNSDDYESDAEGSDXEVHDEE 960
           EV+ +H  + L S   V +     ++SRF   ++ + D+ E + + +D +  DEE
Sbjct: 440 EVDMVHYRDFLMSSVPVSLPGNSKEVSRFWGPQEYSDDEDEDEDDSNDEDDSDEE 494


>06_02_0323 +
           14381803-14382091,14382116-14382348,14382364-14382460,
           14382900-14383024
          Length = 247

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 541 IPHVRYIVNKTEHNTKAKVMRQFKPH-KTTNTDVHDPEKEIQR 666
           +PHV +  N+  H+T  KV+  F P  K   T  H+ EK  ++
Sbjct: 158 LPHVEFAYNRATHST-TKVVYGFNPRAKMHETTKHNIEKMTEK 199


>03_06_0579 + 34870958-34874578
          Length = 1206

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
 Frame = +1

Query: 562 VNKTEHNTKAKVMRQFKPHKTTNTDVHDPEKEIQRGKNKCKKWE----------VTAATP 711
           VN++EHN  A   R+F     ++ + HD + E + G+   K+ E          + AATP
Sbjct: 400 VNESEHNVPASKGRRF-GLGDSDDEFHDDDVEEEEGEVNGKEIEFFDYAALAELLRAATP 458

Query: 712 PPTIHGPAKILSIEDSLKLQ 771
                G AK+  IE S+ LQ
Sbjct: 459 G---QGMAKVFPIESSVPLQ 475


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,016,869
Number of Sequences: 37544
Number of extensions: 534677
Number of successful extensions: 1551
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1546
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3561544780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)