Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_K03
(1167 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75527-1|CAA99774.1| 441|Caenorhabditis elegans Hypothetical pr... 40 0.004
Z83223-6|CAB05719.1| 884|Caenorhabditis elegans Hypothetical pr... 32 0.68
Z81538-6|CAB04387.1| 884|Caenorhabditis elegans Hypothetical pr... 32 0.68
AC090999-21|AAK26150.1| 530|Caenorhabditis elegans Hypothetical... 31 1.6
AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical ... 30 2.7
Z82056-5|CAB04856.1| 378|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z81129-9|CAB03410.1| 378|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z81114-2|CAB03286.1| 604|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z73427-4|CAA97802.3| 601|Caenorhabditis elegans Hypothetical pr... 29 6.3
U56860-5|AAP40524.1| 685|Caenorhabditis elegans Intermediate fi... 29 6.3
U56860-4|AAM69100.1| 1128|Caenorhabditis elegans Intermediate fi... 29 6.3
U56860-3|AAM69101.1| 1248|Caenorhabditis elegans Intermediate fi... 29 6.3
U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical pr... 29 6.3
AF016449-12|AAG24004.2| 365|Caenorhabditis elegans Serpentine r... 29 6.3
U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical pr... 29 8.3
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 8.3
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 8.3
>Z75527-1|CAA99774.1| 441|Caenorhabditis elegans Hypothetical
protein C15C8.1 protein.
Length = 441
Score = 39.5 bits (88), Expect = 0.004
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 4/103 (3%)
Frame = -2
Query: 842 PAIEASLSAACNAFTSLRRKLCSCWSFNESSIDNIFAGPCIVGGGVAAVTSHFLHLFFPL 663
P + + CN+ T ++ SC +E F G I G G++A+ + +FF L
Sbjct: 9 PGLPLLTTLFCNSTTVKKKVKISCDFPDELYTKKAFYGGPI-GAGLSAIEVSIIAVFFLL 67
Query: 662 CISFSGSWTSVFVVL----CGLNCLITLALVLCSVLLTIYLTW 546
+ T VF+ + GL+ L +AL + S++L Y W
Sbjct: 68 SLKMKRDITKVFLTIVYIPLGLSSLFKIALAIYSIMLGAYGWW 110
>Z83223-6|CAB05719.1| 884|Caenorhabditis elegans Hypothetical
protein E01G4.6 protein.
Length = 884
Score = 32.3 bits (70), Expect = 0.68
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = +1
Query: 166 LLELRDRQIKLLNNKSFISKLSDKGAKIQILYDKILSELKAKQEEEDACRMFE 324
L EL +++ KL F KLS K AK++ L ++ LSE + E E A FE
Sbjct: 372 LFELAEQK-KLTLTSKFDEKLSSKMAKLKDLINEALSEKEKSGEIEQAMEKFE 423
>Z81538-6|CAB04387.1| 884|Caenorhabditis elegans Hypothetical
protein E01G4.6 protein.
Length = 884
Score = 32.3 bits (70), Expect = 0.68
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = +1
Query: 166 LLELRDRQIKLLNNKSFISKLSDKGAKIQILYDKILSELKAKQEEEDACRMFE 324
L EL +++ KL F KLS K AK++ L ++ LSE + E E A FE
Sbjct: 372 LFELAEQK-KLTLTSKFDEKLSSKMAKLKDLINEALSEKEKSGEIEQAMEKFE 423
>AC090999-21|AAK26150.1| 530|Caenorhabditis elegans Hypothetical
protein Y82E9BR.2 protein.
Length = 530
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 508 ITPE-DLIKIDEIPHVRYIVNKTEHNTKAKVMRQ-FKPHKTTNTDVHDPEK 654
+TP+ + + D + H+ V EHN K +Q F P + +TD H P+K
Sbjct: 225 VTPKLNELPSDVLIHIFKFVGTKEHNPKPAAFQQNFPPCHSEHTDEHAPQK 275
>AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical
protein T20H9.6 protein.
Length = 758
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 562 VNKTEHNTKAKVMRQFKPHKTTNTDVHDPEKEIQRGKNKCKKWEVT 699
+NKT + + + + KT T+V D + I+RG+N K E+T
Sbjct: 347 INKTVYGQAEHIGKALQTLKTVQTNVQDSNESIRRGENDMLK-EIT 391
>Z82056-5|CAB04856.1| 378|Caenorhabditis elegans Hypothetical
protein T26H5.5 protein.
Length = 378
Score = 29.1 bits (62), Expect = 6.3
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = -2
Query: 695 TSHFLHLFFPLCISFSGSWTSVFVVLCGL-NCLITLALVLCSVLLTIYLTWGISSIL-IR 522
T HF HL P C+S + T +F ++ G L+ + +V + I + I L R
Sbjct: 92 TEHFSHLEHPECMSPNYYSTILFALISGFTGKLVEYLSIWLAVAMAIIRSLVIKYPLNSR 151
Query: 521 SSGVIESFSGSKILIFFSWNVFWVNI 444
S +IES G ++L + + ++I
Sbjct: 152 ISDLIESKYGIRVLFLITLPIIILSI 177
>Z81129-9|CAB03410.1| 378|Caenorhabditis elegans Hypothetical
protein T26H5.5 protein.
Length = 378
Score = 29.1 bits (62), Expect = 6.3
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = -2
Query: 695 TSHFLHLFFPLCISFSGSWTSVFVVLCGL-NCLITLALVLCSVLLTIYLTWGISSIL-IR 522
T HF HL P C+S + T +F ++ G L+ + +V + I + I L R
Sbjct: 92 TEHFSHLEHPECMSPNYYSTILFALISGFTGKLVEYLSIWLAVAMAIIRSLVIKYPLNSR 151
Query: 521 SSGVIESFSGSKILIFFSWNVFWVNI 444
S +IES G ++L + + ++I
Sbjct: 152 ISDLIESKYGIRVLFLITLPIIILSI 177
>Z81114-2|CAB03286.1| 604|Caenorhabditis elegans Hypothetical
protein T04D3.2 protein.
Length = 604
Score = 29.1 bits (62), Expect = 6.3
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 11/64 (17%)
Frame = +1
Query: 208 KSFISKLSD-KGAKIQILYDKIL------SELKAK----QEEEDACRMFENMKLNGIDKQ 354
K+FI ++ + + K +I+YDK+ E+K K +EEE +M ENM L + Q
Sbjct: 443 KTFIVQMEEERRKKTKIIYDKVQLAKKKNKEIKLKKKVLEEEEKTEKMMENMTLENSEDQ 502
Query: 355 SVQE 366
S ++
Sbjct: 503 SKKD 506
>Z73427-4|CAA97802.3| 601|Caenorhabditis elegans Hypothetical
protein F58B3.4 protein.
Length = 601
Score = 29.1 bits (62), Expect = 6.3
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 865 LDLSRFGSYRDTNSDDYESDAEGSDXEVHDEE 960
LDL+R D++SDD S+ EG D E ++E
Sbjct: 153 LDLARGEGNVDSSSDDDSSEDEGEDVEFDEKE 184
>U56860-5|AAP40524.1| 685|Caenorhabditis elegans Intermediate
filament, c protein2, isoform c protein.
Length = 685
Score = 29.1 bits (62), Expect = 6.3
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = +1
Query: 517 EDLIKIDEIPHVRYIVNKTEHNTKAKVMRQFKPHKTTN-TDVHD-PEKEIQRGKNKCKKW 690
E++++ DE I T H+ K ++Q K + TD + EK ++ KN +W
Sbjct: 479 EEVLRTDETTQHTAI---TMHSIVTKEVKQEAKEKINSVTDNAEMKEKVVEIAKNVEYEW 535
Query: 691 EVTAATPPPTIHGPAKILSIEDSLKLQQEHNLRLKEVNALH 813
E TP PT P + ++ LK++ + EV+ LH
Sbjct: 536 EKKPLTPTPTPIPPQQQEVKQEELKVENKIENDQNEVH-LH 575
>U56860-4|AAM69100.1| 1128|Caenorhabditis elegans Intermediate
filament, c protein2, isoform a protein.
Length = 1128
Score = 29.1 bits (62), Expect = 6.3
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = +1
Query: 517 EDLIKIDEIPHVRYIVNKTEHNTKAKVMRQFKPHKTTN-TDVHD-PEKEIQRGKNKCKKW 690
E++++ DE I T H+ K ++Q K + TD + EK ++ KN +W
Sbjct: 479 EEVLRTDETTQHTAI---TMHSIVTKEVKQEAKEKINSVTDNAEMKEKVVEIAKNVEYEW 535
Query: 691 EVTAATPPPTIHGPAKILSIEDSLKLQQEHNLRLKEVNALH 813
E TP PT P + ++ LK++ + EV+ LH
Sbjct: 536 EKKPLTPTPTPIPPQQQEVKQEELKVENKIENDQNEVH-LH 575
>U56860-3|AAM69101.1| 1248|Caenorhabditis elegans Intermediate
filament, c protein2, isoform b protein.
Length = 1248
Score = 29.1 bits (62), Expect = 6.3
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = +1
Query: 517 EDLIKIDEIPHVRYIVNKTEHNTKAKVMRQFKPHKTTN-TDVHD-PEKEIQRGKNKCKKW 690
E++++ DE I T H+ K ++Q K + TD + EK ++ KN +W
Sbjct: 479 EEVLRTDETTQHTAI---TMHSIVTKEVKQEAKEKINSVTDNAEMKEKVVEIAKNVEYEW 535
Query: 691 EVTAATPPPTIHGPAKILSIEDSLKLQQEHNLRLKEVNALH 813
E TP PT P + ++ LK++ + EV+ LH
Sbjct: 536 EKKPLTPTPTPIPPQQQEVKQEELKVENKIENDQNEVH-LH 575
>U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical protein
F20D12.2 protein.
Length = 1116
Score = 29.1 bits (62), Expect = 6.3
Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Frame = +1
Query: 610 KPHKTTNTDVHDPEKEIQRGKNKCKKWEVTAATPPPTIHGPAKILSIEDSL-KLQQEHNL 786
KP + VH P+ I + + WE A P KI +S K+ +EH+
Sbjct: 1004 KPVNDSQITVHSPDTSISIARRHLQDWEPEAVLPTEL---KEKIKRKRESFEKVFEEHSK 1060
Query: 787 RLKEVNALHAAERLASMAGVKMSQLPLD 870
+ K+ L + E A+ +K + D
Sbjct: 1061 KKKQDEELISNEAKANSVHMKQVSVEAD 1088
>AF016449-12|AAG24004.2| 365|Caenorhabditis elegans Serpentine
receptor, class t protein71 protein.
Length = 365
Score = 29.1 bits (62), Expect = 6.3
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -2
Query: 332 FIFSNIRHASSSSCF-AFNSDKILSYKICILAPLSLNLDI 216
F FSN+RH ++ + A +++Y +C LA L LNL +
Sbjct: 23 FSFSNVRHPFLAAYYLASGVIFLITYFLCFLALLKLNLKV 62
>U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical
protein ZC449.5 protein.
Length = 493
Score = 28.7 bits (61), Expect = 8.3
Identities = 29/129 (22%), Positives = 48/129 (37%)
Frame = +1
Query: 574 EHNTKAKVMRQFKPHKTTNTDVHDPEKEIQRGKNKCKKWEVTAATPPPTIHGPAKILSIE 753
E T K + K KTT T K+ + +K K E TP P+ ++ S E
Sbjct: 217 EEETTTKPAKTHKSSKTTTTTTEASTKKDSKKSHKKTKEEKVTTTPEPSTEESSE--SPE 274
Query: 754 DSLKLQQEHNLRLKEVNALHAAERLASMAGVKMSQLPLDLSRFGSYRDTNSDDYESDAEG 933
S + Q + E + + E+ K + D + + + DD +S +
Sbjct: 275 TSEEPQSSESTPTSEESTEQSTEK-PKKEDKKDKKDKKDKKQKKEDSEEDDDDKKSKSSS 333
Query: 934 SDXEVHDEE 960
S DE+
Sbjct: 334 SSDSKTDEK 342
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.7 bits (61), Expect = 8.3
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Frame = +1
Query: 511 TPEDLIKIDEIPHVRYIVNKTEH-----NTKAKVMRQFKPHKTTNTDVHDPEKEIQRGKN 675
T +D+ +I+E+P + I KTE + K+ V++ K+ + DV D K+ +
Sbjct: 12853 TKKDVSEIEEVPKKKTIKKKTEKSDSSISQKSNVLKPADDDKSKSDDVTDKSKKTTEDQT 12912
Query: 676 K 678
K
Sbjct: 12913 K 12913
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.7 bits (61), Expect = 8.3
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Frame = +1
Query: 511 TPEDLIKIDEIPHVRYIVNKTEH-----NTKAKVMRQFKPHKTTNTDVHDPEKEIQRGKN 675
T +D+ +I+E+P + I KTE + K+ V++ K+ + DV D K+ +
Sbjct: 12853 TKKDVSEIEEVPKKKTIKKKTEKSDSSISQKSNVLKPADDDKSKSDDVTDKSKKTTEDQT 12912
Query: 676 K 678
K
Sbjct: 12913 K 12913
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,943,859
Number of Sequences: 27780
Number of extensions: 500390
Number of successful extensions: 1725
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1721
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3182509690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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