Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_K01
         (1167 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_03_0218 + 13539481-13540082,13540171-13540276,13540645-135409...    29   7.1  
08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165     29   7.1  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   9.3  

>09_03_0218 + 13539481-13540082,13540171-13540276,13540645-13540960,
            13541187-13541263,13541269-13541895,13542783-13543112,
            13543442-13543747,13543824-13543896,13544004-13544089,
            13544219-13544396,13545311-13545756
          Length = 1048

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -1

Query: 1137 GXGEGXXXPEGXXGGPVXGKRQGRXRXAXXGXSR 1036
            G G G     G  GG V G+ +GR R    G SR
Sbjct: 46   GRGRGRGRGRGRRGGAVRGRGRGRGRCRGRGRSR 79


>08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165
          Length = 430

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -1

Query: 1041 SRGKRLXSL*SCRXSPPXT*ASIFVMLVRGGGAYGKTPAT 922
            SRGK L S  + R  PP   + + V+ + GGG  G  P T
Sbjct: 25   SRGKSLLSPSTPRSPPPSYGSIVTVLSIDGGGVRGIIPGT 64


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +3

Query: 756 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 911
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,667,743
Number of Sequences: 37544
Number of extensions: 506283
Number of successful extensions: 1299
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1293
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3561544780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)