Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_J22
(1364 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 35 0.13
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 32 0.92
11_06_0610 - 25449085-25453284 31 2.1
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 31 2.1
12_02_1174 - 26696869-26698191 31 2.8
09_01_0180 + 2632507-2634870 29 6.5
06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979 29 6.5
08_01_0059 - 394001-394708 29 8.5
07_03_0560 + 19479597-19480667 29 8.5
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 35.1 bits (77), Expect = 0.13
Identities = 28/110 (25%), Positives = 31/110 (28%), Gaps = 1/110 (0%)
Frame = -2
Query: 937 PPPXPVGXIPXXGXXPPXKXXXGXPXXXTPXXVXXXAXXXXPXXXXFFFXXXTXPPLXXX 758
PPP P+G + P G P V P F T PP
Sbjct: 1122 PPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGF-RGGTPPPNAHG 1180
Query: 757 QGXXPXPPXRXXXXXASPXXTPQKNTPXLXXXV-FPPXPPPXAX*XKFPP 611
P PP R P P P + V P PPP PP
Sbjct: 1181 GVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGGRGLPAPP 1230
>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 32.3 bits (70), Expect = 0.92
Identities = 35/155 (22%), Positives = 37/155 (23%), Gaps = 2/155 (1%)
Frame = -3
Query: 1098 PPXPPXKXXPXPXXXXXXXXXXXGGXXXXXPPPPXPXXFXXHXXXXG--QXXXXXPPPPX 925
PP PP P G PPPP P G PPPP
Sbjct: 635 PPPPPPPPPSLPNRLVPPPPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPP 694
Query: 924 XWVXFXGXXXXPXKXPXXXTPXXPXPXEXXXXPXXXTPXXXFFFXPXXXXXP*XLGRGXP 745
+ P P P P P P P P + P
Sbjct: 695 PPLPPANRTNGPGVPSAPPPPPPPPPANRSNGPSAPAP-------PLPPPLPAAANKRNP 747
Query: 744 PXPXXXXXXXXPPXXXHXKKTPXXSXXXXSPPTPP 640
P P PP KK P P PP
Sbjct: 748 PAP-------PPPPLMTGKKAPAPPPPPPQAPKPP 775
Score = 31.1 bits (67), Expect = 2.1
Identities = 31/133 (23%), Positives = 33/133 (24%), Gaps = 7/133 (5%)
Frame = -3
Query: 1008 PPPPXPXXFXXHXXXXGQXXXXXPPPPXXWVXFXGXXXXPXKXPXXXTPXXPXPXEXXXX 829
PPPP P Q PPPP P P P P
Sbjct: 567 PPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPP----PP 622
Query: 828 PXXXTPXXXFFFXPXXXXXP*XL-GRGXPPXP------XXXXXXXXPPXXXHXKKTPXXS 670
P P P P L R PP P PP +TP +
Sbjct: 623 PPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPPAPGIGNKFPAPPPPPPPPRSSSRTPTGA 682
Query: 669 XXXXSPPTPPXXP 631
P PP P
Sbjct: 683 ATSSKGPPPPPPP 695
Score = 29.9 bits (64), Expect = 4.9
Identities = 27/128 (21%), Positives = 28/128 (21%)
Frame = -3
Query: 1008 PPPPXPXXFXXHXXXXGQXXXXXPPPPXXWVXFXGXXXXPXKXPXXXTPXXPXPXEXXXX 829
PPPP P PPPP P P P P
Sbjct: 547 PPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPP 606
Query: 828 PXXXTPXXXFFFXPXXXXXP*XLGRGXPPXPXXXXXXXXPPXXXHXKKTPXXSXXXXSPP 649
P P P PP P P P +PP
Sbjct: 607 PPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPPAPGIGNKFPAPP 666
Query: 648 TPPXXPXS 625
PP P S
Sbjct: 667 PPPPPPRS 674
Score = 29.5 bits (63), Expect = 6.5
Identities = 28/116 (24%), Positives = 32/116 (27%), Gaps = 7/116 (6%)
Frame = -2
Query: 940 PPPPXPVGXIPXXGXXPPXKXXXGXPXXXTPXXVXXXAXXXXPXXXXFFF-----XXXTX 776
PPPP P G P PP P + P
Sbjct: 549 PPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPP 608
Query: 775 PPLXXXQGXXPXPPXRXXXXXAS--PXXTPQKNTPXLXXXVFPPXPPPXAX*XKFP 614
PP+ + P PP S P P P L + PP P P KFP
Sbjct: 609 PPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPPAPGIG-NKFP 663
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 31.1 bits (67), Expect = 2.1
Identities = 26/113 (23%), Positives = 31/113 (27%), Gaps = 3/113 (2%)
Frame = -2
Query: 940 PPPPXPVGXIP-XXGXXPPXKXXXGXPXXXTPXXVXXXAXXXXPXXXXFFFXXXTXPPLX 764
PPPP P G P PP + P P PP
Sbjct: 628 PPPPAPEGHTPSPPESTPPSEKSPPTPESKASSPPPPTPEGHTPSPPKSTPPTEKSPPTP 687
Query: 763 XXQGXXPXPPXRXXXXXASPXXTP--QKNTPXLXXXVFPPXPPPXAX*XKFPP 611
+ P PP + P TP +K+ P P PP PP
Sbjct: 688 ESESSSPPPPAPEGHMPSPPKSTPPVEKSPPTPESEASSPPPPAPEGHTPSPP 740
>08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 31.1 bits (67), Expect = 2.1
Identities = 29/123 (23%), Positives = 30/123 (24%)
Frame = -2
Query: 1009 PPPXXPXXFXXXFXXXXXXXFXXPPPPXPVGXIPXXGXXPPXKXXXGXPXXXTPXXVXXX 830
PPP P F PPPP P G P P G P P
Sbjct: 31 PPPQQPAYGHMPPPQGAPPPFLAPPPPPPPG--PPPPHQPQFNFGPGPPQQQQPPPPPQM 88
Query: 829 AXXXXPXXXXFFFXXXTXPPLXXXQGXXPXPPXRXXXXXASPXXTPQKNTPXLXXXVFPP 650
P + PP P PP A P P P P
Sbjct: 89 YYQPPPPPPPYGVNSSQPPP--------PPPPPPSPPPSAPPPPPPPPTQPPPREAQLAP 140
Query: 649 XPP 641
PP
Sbjct: 141 PPP 143
Score = 30.7 bits (66), Expect = 2.8
Identities = 18/65 (27%), Positives = 19/65 (29%)
Frame = -1
Query: 683 HPXPPTXXXPPXPPPXCXIVXISPXXXXFXXQKXPXGXRXHXXKALPPQXQXTFPLGXXX 504
HP PP PP PPP P + P G PP P
Sbjct: 10 HPPPPQGGFPPQPPPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQPQ 69
Query: 503 FXFXP 489
F F P
Sbjct: 70 FNFGP 74
Score = 29.1 bits (62), Expect = 8.5
Identities = 16/52 (30%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Frame = -1
Query: 788 RPHXPXPXXXAGXXPXSPXXXXXXXXLPXXXTXKKHPXPPTXXXPP--XPPP 639
RP+ P P G P P P H PP PP PPP
Sbjct: 5 RPYAPHPPPPQGGFPPQPPPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPP 56
>12_02_1174 - 26696869-26698191
Length = 440
Score = 30.7 bits (66), Expect = 2.8
Identities = 22/101 (21%), Positives = 24/101 (23%)
Frame = -2
Query: 940 PPPPXPVGXIPXXGXXPPXKXXXGXPXXXTPXXVXXXAXXXXPXXXXFFFXXXTXPPLXX 761
PPPP + PP K P P PP
Sbjct: 126 PPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSL 185
Query: 760 XQGXXPXPPXRXXXXXASPXXTPQKNTPXLXXXVFPPXPPP 638
P PP P P+ P PP PPP
Sbjct: 186 QPPSPPPPPPTRPPSVKPPVVQPKPQPPPTLPPPSPPPPPP 226
>09_01_0180 + 2632507-2634870
Length = 787
Score = 29.5 bits (63), Expect = 6.5
Identities = 15/50 (30%), Positives = 18/50 (36%)
Frame = -3
Query: 762 LGRGXPPXPXXXXXXXXPPXXXHXKKTPXXSXXXXSPPTPPXXPXSXNFP 613
LG P P PP + P S SPP+P P S + P
Sbjct: 215 LGPSLPARPFPKKPSPPPPPAQQQQSVPPMSKFNPSPPSPKLVPFSNSPP 264
>06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979
Length = 304
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -1
Query: 746 PXSPXXXXXXXXLPXXXTXKKHPXPPTXXXPPXPPP 639
P P P T KHP P PP PPP
Sbjct: 55 PPPPPPPPQPAKEPPPPTKPKHPKPKQQQHPPPPPP 90
>08_01_0059 - 394001-394708
Length = 235
Score = 29.1 bits (62), Expect = 8.5
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -2
Query: 745 PXPPXRXXXXXASPXXTPQKNTPXLXXXVFPPXPP 641
P PP R A+P P++ P + PP PP
Sbjct: 4 PPPPRRAPPPPATPPPPPRRAPPPPSPPIRPPPPP 38
>07_03_0560 + 19479597-19480667
Length = 356
Score = 29.1 bits (62), Expect = 8.5
Identities = 27/110 (24%), Positives = 29/110 (26%)
Frame = +3
Query: 612 GGNXNYXAXGGGXGGXTXXXRXGVFFXGVXXGEAXXXXXRXGGXGXXPCXXXRGGXVXXX 791
GG GGG G + G F G G GG G GG +
Sbjct: 126 GGGGGGLGGGGGGGVGGGGGQGGGFGAGGGVGGGSGTGGGLGGGGGGGFGGDGGGGLGGG 185
Query: 792 KKKXXXXGXXXMAXXXTXXGVXXXGXPXXXFXGGXXPXXGXXPTGXGGGG 941
K G G G F GG G G GGG
Sbjct: 186 GGKEGGFGAGGGVGGGAGGGGGMGGGGGGGFGGGGGKGGGFGAGGGMGGG 235
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,991,812
Number of Sequences: 37544
Number of extensions: 386636
Number of successful extensions: 1901
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1553
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4306671240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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