Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_J21
         (1231 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    30   0.16 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   3.4  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   7.9  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 29.9 bits (64), Expect = 0.16
 Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
 Frame = +2

Query: 794 NPGXPPXKPPXAPPGXXXGXKXKXP-PPXPPGXGGXXXXP 910
           NPG PP      PPG     +   P  P PP  GG    P
Sbjct: 182 NPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQP 221



 Score = 25.0 bits (52), Expect = 4.5
 Identities = 13/40 (32%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
 Frame = +2

Query: 794 NPGXPPXKPPXAP-PGXXXGXKXKXPPPXPPGXGGXXXXP 910
           NP   P +    P PG   G + K  P  PP   G    P
Sbjct: 376 NPARAPPRNFTMPGPGPGIGEREKSNPSRPPSVAGSYGKP 415



 Score = 24.6 bits (51), Expect = 6.0
 Identities = 11/32 (34%), Positives = 12/32 (37%)
 Frame = +2

Query: 797 PGXPPXKPPXAPPGXXXGXKXKXPPPXPPGXG 892
           PG P    P  PPG   G +    P  P   G
Sbjct: 222 PGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQG 253


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 3.4
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -3

Query: 557 GXFXGGGGGGPXKXXPXXPGGGG 489
           G   GGGGG      P   GGGG
Sbjct: 209 GGAPGGGGGSSGGPGPGGGGGGG 231



 Score = 25.0 bits (52), Expect = 4.5
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -2

Query: 837 PGGAXGGFXGGXPGFFXXPXGXPPP 763
           PG   GG  GG PG      G P P
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGP 224


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.2 bits (50), Expect = 7.9
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 545 GGGGGGPXKXXPXXPGGG 492
           GGG GGP +      GGG
Sbjct: 841 GGGAGGPLRGSSGGAGGG 858


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.309    0.149    0.505 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,727
Number of Sequences: 2352
Number of extensions: 11558
Number of successful extensions: 41
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 140200221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)