Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_J18
(1265 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 243 2e-64
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 243 2e-64
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 175 7e-44
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 171 9e-43
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 166 3e-41
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 165 6e-41
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 132 5e-31
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 131 9e-31
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 125 6e-29
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 115 6e-26
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 107 2e-23
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 99 8e-21
U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical pr... 71 2e-12
U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical pr... 61 1e-09
AC006627-8|AAK85458.1| 276|Caenorhabditis elegans Hypothetical ... 40 0.003
AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen prot... 31 1.7
Z46794-1|CAA86782.1| 367|Caenorhabditis elegans Hypothetical pr... 29 5.3
Y10114-1|CAA71200.1| 367|Caenorhabditis elegans histone RNA hai... 29 5.3
AB060649-1|BAB83255.1| 367|Caenorhabditis elegans histone stem-... 29 5.3
Z82077-5|CAB63333.1| 783|Caenorhabditis elegans Hypothetical pr... 29 9.2
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 243 bits (595), Expect = 2e-64
Identities = 112/207 (54%), Positives = 139/207 (67%)
Frame = +1
Query: 151 NNGRTCPVIGLGTWKSKPGAVXQAVKXAXDIGYRHVDCAHIYLNEKEVGDALXAKFEEGT 330
N+G + P IGLGTW+SKPG V A+K A GYRH+DCAH+Y N+KEVG+AL +EG
Sbjct: 8 NSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKEILDEGK 67
Query: 331 IKREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKEGDDLFPKDS 510
+KRE++FITSK+W TFH E I L +L L Y+DL LIHWPQ + EG +LFP
Sbjct: 68 VKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAEGAELFPAGE 127
Query: 511 EDKFIPSAVDYVDTWGALEALVEKGLTRSIGLSNFNRRQIERVLEVAKIKPAVLQIEVHP 690
K S VDY++TW A EA + G RSIGLSNF QI+RV + A++KPA LQ+E+HP
Sbjct: 128 NGKMRYSDVDYLETWKAFEAAQKAGKCRSIGLSNFTHSQIQRVWDAAEVKPACLQVELHP 187
Query: 691 YLNQEKLFEFCKSRDIAVTAYSRXGXP 771
Y Q KL EFCK + I V YS G P
Sbjct: 188 YFTQVKLREFCKEKGIVVVGYSPLGNP 214
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 243 bits (595), Expect = 2e-64
Identities = 112/207 (54%), Positives = 139/207 (67%)
Frame = +1
Query: 151 NNGRTCPVIGLGTWKSKPGAVXQAVKXAXDIGYRHVDCAHIYLNEKEVGDALXAKFEEGT 330
N+G + P IGLGTW+SKPG V A+K A GYRH+DCAH+Y N+KEVG+AL +EG
Sbjct: 8 NSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKEILDEGK 67
Query: 331 IKREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKEGDDLFPKDS 510
+KRE++FITSK+W TFH E I L +L L Y+DL LIHWPQ + EG +LFP
Sbjct: 68 VKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAEGAELFPAGE 127
Query: 511 EDKFIPSAVDYVDTWGALEALVEKGLTRSIGLSNFNRRQIERVLEVAKIKPAVLQIEVHP 690
K S VDY++TW A EA + G RSIGLSNF QI+RV + A++KPA LQ+E+HP
Sbjct: 128 NGKMRYSDVDYLETWKAFEAAQKAGKCRSIGLSNFTHSQIQRVWDAAEVKPACLQVELHP 187
Query: 691 YLNQEKLFEFCKSRDIAVTAYSRXGXP 771
Y Q KL EFCK + I V YS G P
Sbjct: 188 YFTQVKLREFCKEKGIVVVGYSPLGNP 214
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 175 bits (425), Expect = 7e-44
Identities = 87/209 (41%), Positives = 127/209 (60%), Gaps = 2/209 (0%)
Frame = +1
Query: 151 NNGRTCPVIGLGTWKSKPGA-VXQAVKXAXDIGYRHVDCAHIYLNEKEVGDALXAKFEEG 327
N G P+ GLGTW+ K A + A++ A D GYR +D AH+Y NE +G L G
Sbjct: 9 NTGAQLPLFGLGTWQVKDEAELTVALRAALDAGYRLIDTAHLYQNEHIIGKVLHEYISSG 68
Query: 328 TIKREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKEGDDLF-PK 504
+KREDIF+TSKL T H P+ V + +++ LK L LEY+DLYLIH P FK + F P
Sbjct: 69 KLKREDIFVTSKLPFTAHAPEDVPKCVESQLKALQLEYIDLYLIHCPFPFKHQEGSFAPL 128
Query: 505 DSEDKFIPSAVDYVDTWGALEALVEKGLTRSIGLSNFNRRQIERVLEVAKIKPAVLQIEV 684
+ + + ++DTW ALE L ++G +++G+SNF+ Q++ + + A++KPA Q+E
Sbjct: 129 MENGELAVTEIAHIDTWRALEKLYKEGKLKALGVSNFSCNQLQALYDAAEVKPANQQVEC 188
Query: 685 HPYLNQEKLFEFCKSRDIAVTAYSRXGXP 771
H Y Q++L CK + VTAY+ G P
Sbjct: 189 HIYWPQQELRALCKKLGVTVTAYAPLGSP 217
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 171 bits (416), Expect = 9e-43
Identities = 90/207 (43%), Positives = 122/207 (58%)
Frame = +1
Query: 151 NNGRTCPVIGLGTWKSKPGAVXQAVKXAXDIGYRHVDCAHIYLNEKEVGDALXAKFEEGT 330
+NG P IGLGTW+ ++ A GYRH+D A +Y NE ++GDAL F EG
Sbjct: 11 SNGVLMPSIGLGTWQMTGEEGKTVIRNAVLAGYRHIDTATLYQNEHQIGDALAELFAEGI 70
Query: 331 IKREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKEGDDLFPKDS 510
+KREDIFIT+K +C PD+VEEA++ SLK L L+Y+DLYL H P + K+ D F D
Sbjct: 71 LKREDIFITTKAFCHEVAPDVVEEALRNSLKRLRLDYVDLYLAHIPASTKD-DGSFRSD- 128
Query: 511 EDKFIPSAVDYVDTWGALEALVEKGLTRSIGLSNFNRRQIERVLEVAKIKPAVLQIEVHP 690
V D W E + GLT++IG+SNFN QI R++ + K+ Q+E+H
Sbjct: 129 --------VKVEDIWRGFEKVYGLGLTKAIGVSNFNESQIVRIMNIQKVPIHASQLELHL 180
Query: 691 YLNQEKLFEFCKSRDIAVTAYSRXGXP 771
YL Q+ E CK +I +TAY+ G P
Sbjct: 181 YLPQKAHRELCKKHNILITAYATLGSP 207
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 166 bits (403), Expect = 3e-41
Identities = 87/207 (42%), Positives = 121/207 (58%)
Frame = +1
Query: 151 NNGRTCPVIGLGTWKSKPGAVXQAVKXAXDIGYRHVDCAHIYLNEKEVGDALXAKFEEGT 330
+NG PVIGLGTW+S P V AVK A GYR +D A +Y NE+ +G A+ EEG
Sbjct: 11 SNGVEMPVIGLGTWQSSPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGTAIKELLEEGV 70
Query: 331 IKREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKEGDDLFPKDS 510
+KRE++FIT+K W P +E ++ SLK L LEY+DLYL H P AF DD+
Sbjct: 71 VKREELFITTKAWTHELAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAF--NDDM----- 123
Query: 511 EDKFIPSAVDYVDTWGALEALVEKGLTRSIGLSNFNRRQIERVLEVAKIKPAVLQIEVHP 690
+ I S V+ D W +A+ + GL +++G+SN+N QI R L + Q+E+H
Sbjct: 124 -SEHIASPVE--DVWRQFDAVYKAGLAKAVGVSNWNNDQISRALALGLTPVHNSQVELHL 180
Query: 691 YLNQEKLFEFCKSRDIAVTAYSRXGXP 771
Y Q +FCK +I+VT+Y+ G P
Sbjct: 181 YFPQHDHVDFCKKHNISVTSYATLGSP 207
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 165 bits (401), Expect = 6e-41
Identities = 81/212 (38%), Positives = 127/212 (59%), Gaps = 5/212 (2%)
Frame = +1
Query: 151 NNGRTCPVIGLGTWKSKPGAVXQAVKXAXDIGYRHVDCAHIYLNEKEVGDALXAKFEEGT 330
N+G PVIG GTW+ + V+ A + GYRH+D A + N++EV + +
Sbjct: 10 NSGYEMPVIGYGTWQLPKNLAAERVRDALEAGYRHIDSALSFKNQEEVAAGIKDWCKIRK 69
Query: 331 IKREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKEGDD-----L 495
++RE++F++SK+W T+H + + I L+ Y+DL +IHWP + E + L
Sbjct: 70 VRREELFLSSKIWNTYHSRNRCMQQIDEMLEIFETTYMDLIVIHWPFGWAEDEPPGERGL 129
Query: 496 FPKDSEDKFIPSAVDYVDTWGALEALVEKGLTRSIGLSNFNRRQIERVLEVAKIKPAVLQ 675
+P+ + K S VDY++TW ALE G RSIGL+NFN Q+E+V IKPAVLQ
Sbjct: 130 WPRGANGKMRYSDVDYLETWKALEDAHRSGKIRSIGLANFNIGQVEQVWTKGLIKPAVLQ 189
Query: 676 IEVHPYLNQEKLFEFCKSRDIAVTAYSRXGXP 771
+E++P+L+QE++ +FC+ + I +TA+ G P
Sbjct: 190 VEMNPFLDQEEIRQFCREKGIILTAFMLTGNP 221
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 132 bits (319), Expect = 5e-31
Identities = 73/202 (36%), Positives = 112/202 (55%), Gaps = 1/202 (0%)
Frame = +1
Query: 169 PVIGLGTWK-SKPGAVXQAVKXAXDIGYRHVDCAHIYLNEKEVGDALXAKFEEGTIKRED 345
P+IG+GTW+ K + Q + GYR +D A +Y NE ++G L +KRED
Sbjct: 12 PLIGIGTWQVQKEEILRQVIDAGFKEGYRFIDTAQVYNNEAKIGRILEKLLPANGLKRED 71
Query: 346 IFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKEGDDLFPKDSEDKFI 525
I+ITSKL + E+I+ SL NL +EYLDL LIHWP G L ++ +K +
Sbjct: 72 IWITSKLAPSNAGVKKARESIEESLSNLKVEYLDLLLIHWP-----GSSLKSENPANKKL 126
Query: 526 PSAVDYVDTWGALEALVEKGLTRSIGLSNFNRRQIERVLEVAKIKPAVLQIEVHPYLNQE 705
V++W + ++ +G RS+G+SNF +E + + + + PAV Q+E HP+ +Q+
Sbjct: 127 R-----VESWNVMCEMMAEGKLRSVGVSNFEICHLEELKKDSNVVPAVNQVEYHPHFHQD 181
Query: 706 KLFEFCKSRDIAVTAYSRXGXP 771
L ++C +I AYS G P
Sbjct: 182 DLVKYCNENNIHFQAYSSLGSP 203
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 131 bits (317), Expect = 9e-31
Identities = 77/203 (37%), Positives = 112/203 (55%), Gaps = 1/203 (0%)
Frame = +1
Query: 151 NNGRTCPVIGLGTWKSKPGAVXQAVKXAXDIGYRHVDCAHIYLNEKEVGDALXAKFEEGT 330
N G CP+IGLGT+K V + A GYR D A +Y NEKE+GDAL +
Sbjct: 6 NTGYDCPLIGLGTYKIIGDQVLPVLDAALTAGYRLFDTAKVYNNEKEIGDALEILLPKHN 65
Query: 331 IKREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKEGDDLFPKDS 510
+KREDIFIT+K+ + + V++ + SL L Y+D+YLIH+P++F GD +D
Sbjct: 66 LKREDIFITTKMHP--NTVENVKKLVDESLSLLKTSYIDMYLIHYPKSFDYGD----QDP 119
Query: 511 EDKFIPSAVDYVDTWGALEALVEKGLTRSIGLSNFNRRQIERVLEVAK-IKPAVLQIEVH 687
+K + A TW L G RS+G+S+F R +E + ++ K P Q+E H
Sbjct: 120 MNKTLRIA-----TWNDLWECKNAGKIRSVGVSSFEIRHLEELKDLGKNFPPCCNQVEYH 174
Query: 688 PYLNQEKLFEFCKSRDIAVTAYS 756
P+ +E+L +CKS I A+S
Sbjct: 175 PHFTREELKNYCKSEGIFFQAFS 197
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 125 bits (302), Expect = 6e-29
Identities = 74/206 (35%), Positives = 112/206 (54%), Gaps = 2/206 (0%)
Frame = +1
Query: 154 NGRTCPVIGLGTWKSKPGAVXQAVKXAXDIGYRHVDCAHIYLNEKEVGDALXAKFEEGTI 333
NG+ P + LGT+++K + AV A +GYR D A Y NEK++G AL I
Sbjct: 6 NGQEIPKLALGTYEAKGDQLFAAVDEALKVGYRSFDTAKYYENEKDLGLALKTLLPRHNI 65
Query: 334 KREDIFITSKL--WCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKEGDDLFPKD 507
EDI++TSK+ + + + +L+ + + SL+ L +YLDL L+H+P+ P D
Sbjct: 66 CSEDIYLTSKVFPYSSKNAAELIRKDVNESLELLDRKYLDLVLVHYPR---------PLD 116
Query: 508 SEDKFIPSAVDYVDTWGALEALVEKGLTRSIGLSNFNRRQIERVLEVAKIKPAVLQIEVH 687
+ED + + DTW ALE L +G RSIG+SN+ IE + I+P V QIE H
Sbjct: 117 TEDLNENNKMYRKDTWIALEKLHAEGKIRSIGVSNYEPHHIEEMRSYITIEPQVNQIEYH 176
Query: 688 PYLNQEKLFEFCKSRDIAVTAYSRXG 765
P+ ++ L +C +I A+S G
Sbjct: 177 PHFQRKVLRAYCNKNEILFQAFSPLG 202
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 115 bits (277), Expect = 6e-26
Identities = 66/203 (32%), Positives = 108/203 (53%), Gaps = 1/203 (0%)
Frame = +1
Query: 151 NNGRTCPVIGLGTWKSKPGAVXQAVKXAXDIGYRHVDCAHIYLNEKEVGDALXAKFEEGT 330
N+G P +G GT+K V A+ A GYR D A YLNEKE+G+AL +
Sbjct: 16 NSGYNIPFVGFGTYKVTGENVPPAIDAALTAGYRMFDTAKYYLNEKELGEALKILLPKHG 75
Query: 331 IKREDIFITSKLWC-TFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKEGDDLFPKD 507
+ R D+F+TSK + + + + ++ SL++L +Y+D+YL+H+P+ P D
Sbjct: 76 LSRSDVFLTSKFFPESKNCREACRGFVEESLQSLQTDYIDMYLVHYPK---------PND 126
Query: 508 SEDKFIPSAVDYVDTWGALEALVEKGLTRSIGLSNFNRRQIERVLEVAKIKPAVLQIEVH 687
S++ + +A + LE G RSIG+SN+ +E + AK+ P Q+E H
Sbjct: 127 SDNDDVNNAEYRKIAYEVLEEAKAAGKVRSIGVSNYEIVHLEELKTYAKVPPCANQLEYH 186
Query: 688 PYLNQEKLFEFCKSRDIAVTAYS 756
P+ + L ++CK ++I A+S
Sbjct: 187 PHFARIPLQKYCKEKNIFFQAFS 209
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 107 bits (257), Expect = 2e-23
Identities = 68/205 (33%), Positives = 108/205 (52%), Gaps = 2/205 (0%)
Frame = +1
Query: 148 FNNGRTCPVIGLGTWKSKPGA-VXQAVKXAXDIGYRHVDCAHIYLNEKEVGDALXAKFEE 324
F++G P IGLG + + + +++ A GYR D A++Y NE +G++L +
Sbjct: 14 FSDGYEMPKIGLGISRIETQQDLDVSIEAALKSGYRQFDTANLYKNETFLGNSLKKYLPQ 73
Query: 325 GTIKREDIFITSKL-WCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKEGDDLFP 501
+ RED+FIT+K+ + + E+ + SL L +Y+DL LIH+P+ G+D
Sbjct: 74 FGLTREDVFITTKVRTLNENTVEETEKQLANSLATLQTDYVDLLLIHYPRDRDTGND--- 130
Query: 502 KDSEDKFIPSAVDYVDTWGALEALVEKGLTRSIGLSNFNRRQIERVLEVAKIKPAVLQIE 681
+D I + + W LE E G RSIG+SN+ + + E AKI+P + Q E
Sbjct: 131 ---DDYEINKSRRKI-VWQTLEKAKESGRVRSIGVSNYEVYHLVEMFEYAKIRPVLNQYE 186
Query: 682 VHPYLNQEKLFEFCKSRDIAVTAYS 756
PYL + L +FC +I V +YS
Sbjct: 187 YQPYLTRPTLKKFCDLNNIVVQSYS 211
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 98.7 bits (235), Expect = 8e-21
Identities = 66/203 (32%), Positives = 99/203 (48%)
Frame = +1
Query: 145 IFNNGRTCPVIGLGTWKSKPGAVXQAVKXAXDIGYRHVDCAHIYLNEKEVGDALXAKFEE 324
+ +N P+IGLGT S + GYR +D A Y EK++G A+ +
Sbjct: 6 VLSNNVEMPLIGLGTTHSGGYYHDAVLHSIKKCGYRLIDTAKRYGVEKQLGIAV----KN 61
Query: 325 GTIKREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKEGDDLFPK 504
++ RE++F+++KLW D V A +TS + L +YLD+Y+IH PQ D
Sbjct: 62 CSVPREEMFLSTKLW-PVDCGDEVYNAFQTSCEKLQTDYLDMYMIHMPQL----PDWIVN 116
Query: 505 DSEDKFIPSAVDYVDTWGALEALVEKGLTRSIGLSNFNRRQIERVLEVAKIKPAVLQIEV 684
E K TW +E L E RSIG+SN++ ++ +LE A I P Q+E+
Sbjct: 117 QKETK--------EKTWRQMELLYEDEHVRSIGVSNYSIEDLDELLEFASILPHANQVEL 168
Query: 685 HPYLNQEKLFEFCKSRDIAVTAY 753
HP+ +Q L +C I Y
Sbjct: 169 HPWFHQADLKNYCDELGILTMGY 191
>U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical
protein C07D8.5 protein.
Length = 134
Score = 70.9 bits (166), Expect = 2e-12
Identities = 35/86 (40%), Positives = 50/86 (58%)
Frame = +1
Query: 109 SSIKHWPRQSPXIFNNGRTCPVIGLGTWKSKPGAVXQAVKXAXDIGYRHVDCAHIYLNEK 288
S +K+ +S +N + P +GLGTW+S V AVK A GY +D A Y NE+
Sbjct: 37 SYLKNSDAKSHLTLSNAHSMPAVGLGTWQSNAEDVISAVKAAVKNGYSLIDTASGYNNEE 96
Query: 289 EVGDALXAKFEEGTIKREDIFITSKL 366
+G A+ EG +KRED+FIT+K+
Sbjct: 97 FIGTAIKEVIAEGVVKREDLFITTKV 122
>U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical
protein C56G3.2 protein.
Length = 131
Score = 61.3 bits (142), Expect = 1e-09
Identities = 36/88 (40%), Positives = 51/88 (57%)
Frame = +1
Query: 367 WCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKEGDDLFPKDSEDKFIPSAVDYV 546
W P +E A++ SLK L LEY+DLYL H P AF DD+ K I S+V+
Sbjct: 53 WTNELAPGRLEGALRDSLKKLHLEYVDLYLAHMPTAF--SDDMSQK------IESSVE-- 102
Query: 547 DTWGALEALVEKGLTRSIGLSNFNRRQI 630
D W +A+ + GL +++G+SN+N QI
Sbjct: 103 DIWRQFDAVYKAGLAKAVGVSNWNNDQI 130
>AC006627-8|AAK85458.1| 276|Caenorhabditis elegans Hypothetical
protein E01A2.1 protein.
Length = 276
Score = 40.3 bits (90), Expect = 0.003
Identities = 26/118 (22%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
Frame = +1
Query: 334 KREDIFITSKLWCTFHRPDLVEEAIKTSLKNLGLEYLDLYLIHWPQAFKEGDDLFPKDSE 513
+R++I IT K++ + +++A+ + + L + +++ ++ +P+ DL +SE
Sbjct: 77 ERDEIKITMKVFLSAWDVQQIDQAVTSLKEQLKTKDIEVLILSFPEL-----DLIDGESE 131
Query: 514 DKFIPSAVDYVDT-WGALEALVEKGLTRSIGLSNFNRRQIERVLEVAKIKPAVLQIEV 684
+ + V + +E LVE SIG+S+F+ RQ++ +++ +KP++ + +
Sbjct: 132 EDENNRWFEKVKPLYTYMEKLVETSEIASIGVSDFSARQLKTIIDHFDVKPSINHVRL 189
>AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen protein
102 protein.
Length = 460
Score = 31.1 bits (67), Expect = 1.7
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +3
Query: 615 QPAPD*ESTGSGQDQAGCP-PDRSAPLPEPGEAVRVLQESRHRGDGLLPXGXXP 773
+ AP E G G + AG PD +A PE A + G G P G P
Sbjct: 371 EAAPAAEGAGGGAEPAGAAAPDAAAAAPEAAAAPEAAPAAEGAGGGAEPAGAAP 424
Score = 29.9 bits (64), Expect = 4.0
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = +3
Query: 615 QPAPD*ESTGSGQDQAGCPPDRSAPLPEPGEAVRVLQESRHRGDGLLPXG 764
+ AP E G G + AG PD +A PE A + G G P G
Sbjct: 339 EAAPAAEGAGGGAEPAGAAPDAAAAAPEAAPA-EAAPAAEGAGGGAEPAG 387
>Z46794-1|CAA86782.1| 367|Caenorhabditis elegans Hypothetical
protein R06F6.1 protein.
Length = 367
Score = 29.5 bits (63), Expect = 5.3
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -1
Query: 500 GNRSSPSLKAWGQCIR*RSKYSKPRFFNEVLIASSTRS 387
G RSSP KAWG I+ +K+ F E S RS
Sbjct: 9 GTRSSPRKKAWGSPIKATAKFQSDIFSVEDFADLSNRS 46
>Y10114-1|CAA71200.1| 367|Caenorhabditis elegans histone RNA
hairpin-binding protein protein.
Length = 367
Score = 29.5 bits (63), Expect = 5.3
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -1
Query: 500 GNRSSPSLKAWGQCIR*RSKYSKPRFFNEVLIASSTRS 387
G RSSP KAWG I+ +K+ F E S RS
Sbjct: 9 GTRSSPRKKAWGSPIKATAKFQSDIFSVEDFADLSNRS 46
>AB060649-1|BAB83255.1| 367|Caenorhabditis elegans histone
stem-loop binding proteinCDL-1 protein.
Length = 367
Score = 29.5 bits (63), Expect = 5.3
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -1
Query: 500 GNRSSPSLKAWGQCIR*RSKYSKPRFFNEVLIASSTRS 387
G RSSP KAWG I+ +K+ F E S RS
Sbjct: 9 GTRSSPRKKAWGSPIKATAKFQSDIFSVEDFADLSNRS 46
>Z82077-5|CAB63333.1| 783|Caenorhabditis elegans Hypothetical
protein W09C5.7 protein.
Length = 783
Score = 28.7 bits (61), Expect = 9.2
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 649 AKIKPAVLQIEVHPYLNQEKLFEFCKSRDIAVTA 750
A+ +PA+L +V N K F FC+SRD+ +++
Sbjct: 135 AEPRPALLD-DVLKLFNDSKDFYFCRSRDVTISS 167
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,599,629
Number of Sequences: 27780
Number of extensions: 295357
Number of successful extensions: 960
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 939
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3526846804
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -