Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_J13
(1207 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 35 0.001
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 4.1
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 4.1
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 4.1
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 4.1
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 5.4
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 23 7.1
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 9.4
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 35.1 bits (77), Expect = 0.001
Identities = 35/177 (19%), Positives = 70/177 (39%), Gaps = 5/177 (2%)
Frame = +1
Query: 106 GAHQGIGFAIVRGLCKRFNGTVSLPSRAAARGXIAVETLXNAG-LNPXSHQLXXTXKQSV 282
GA+ GIG ++ L + + + + + E G L P Q + + +
Sbjct: 14 GANSGIGKCLIECLVGKGMKVIGIAPQVDKMKTLVEELKSKPGKLVPL--QCDLSNQNDI 71
Query: 283 ESFRAYIKTKSXGIDILINNAAIAFKQXATXPVAVQAEQTLYVNFFSLTSTCELLFPIVK 462
+++ IDILINNA I + ++ +N LT + + ++K
Sbjct: 72 LKVIEWVEKNLGAIDILINNATINIDVTLQNDEVLDWKKIFDINLLGLTCMIQEVLKLMK 131
Query: 463 ----NGGRVINVSSSAGHLSRIPSENLRNKLKDPKLTLPELIALMQKYVDDAKQGIQ 621
N G ++N++ ++G L+ +P R K L L ++ + + I+
Sbjct: 132 KKGINNGIIVNINDASG-LNLLPMNRNRPAYLASKCALTTLTDCLRSELAQCESNIK 187
Score = 30.3 bits (65), Expect = 0.035
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Frame = +1
Query: 643 SYAVSKVGVTALTKVQQRMLS--DRDIKVNAVHPGYVDTDMTS-----HKGVLTIDEGAS 801
+Y SK +T LT + L+ + +IKV ++ P V+TDMT+ + + + S
Sbjct: 160 AYLASKCALTTLTDCLRSELAQCESNIKVISISPDLVETDMTAQWLKENSRLALKPKDVS 219
Query: 802 APLFLALDAPDSV 840
+ AL PD+V
Sbjct: 220 NCVLFALQTPDNV 232
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.4 bits (48), Expect = 4.1
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 328 ILINNAAIAF-KQXATXPVAVQAEQTLYVNFFSLTSTCELLFPIVKN 465
IL+ ++ I F + P V T +NFF+ ++ P+V N
Sbjct: 313 ILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTTSNGFRSTLPVVSN 359
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.4 bits (48), Expect = 4.1
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 328 ILINNAAIAF-KQXATXPVAVQAEQTLYVNFFSLTSTCELLFPIVKN 465
IL+ ++ I F + P V T +NFF+ ++ P+V N
Sbjct: 282 ILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTTSNGFRSTLPVVSN 328
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.4 bits (48), Expect = 4.1
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 328 ILINNAAIAF-KQXATXPVAVQAEQTLYVNFFSLTSTCELLFPIVKN 465
IL+ ++ I F + P V T +NFF+ ++ P+V N
Sbjct: 333 ILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTTSNGFRSTLPVVSN 379
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.4 bits (48), Expect = 4.1
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 328 ILINNAAIAF-KQXATXPVAVQAEQTLYVNFFSLTSTCELLFPIVKN 465
IL+ ++ I F + P V T +NFF+ ++ P+V N
Sbjct: 282 ILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTTSNGFRSTLPVVSN 328
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.0 bits (47), Expect = 5.4
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -3
Query: 866 QSFQTYWPLTESGASSARNRGADAPSSIVSTPLWEVMSVST 744
Q Q +WP+ E A+S + V +PL V S +
Sbjct: 458 QQQQQHWPMEEEPAASWGSASDVTLDEAVKSPLGSVSSTES 498
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 22.6 bits (46), Expect = 7.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 865 SHSRHTGLLQSLERPVLET 809
SH +LQ LE+PVL +
Sbjct: 307 SHESQCPMLQKLEKPVLSS 325
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.2 bits (45), Expect = 9.4
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1
Query: 709 RDIKVNAVHPGYVDTDMTSHKGV 777
RD+ V AV Y DTD+ +
Sbjct: 93 RDVNVRAVVAQYYDTDVNKEYAI 115
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 259,422
Number of Sequences: 438
Number of extensions: 4854
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 41211342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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