Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_J09
         (1209 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    27   0.21 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   1.1  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    25   1.1  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 27.5 bits (58), Expect = 0.21
 Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
 Frame = -2

Query: 605 NDCVSGNVPWNSLSQSESDCANGC-GYDCASNYDGGNETWTCARDRNDSCMAMRGDHIAP 429
           N C +G    + ++     C +G  GY C  N D   +    A   N +C+   G     
Sbjct: 229 NPCQNGGTCHDLVNSFSCSCPSGTLGYICEINVD---DCRPGACHNNGTCLDKVGGF--- 282

Query: 428 SEREVPCRPTFVRPSCPG 375
              E  C P FV P C G
Sbjct: 283 ---ECKCPPGFVGPRCEG 297


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +1

Query: 829 VFISFYFHCV*LFHLYKKKEIMACATSLGLVILIGFKFLS 948
           VFISF   C    HL K  ++      + L++L G  FLS
Sbjct: 219 VFISFSKICYLHQHLSKSVKLFNEVFGVSLLVLFGNSFLS 258


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +1

Query: 829 VFISFYFHCV*LFHLYKKKEIMACATSLGLVILIGFKFLS 948
           VFISF   C    HL K  ++      + L++L G  FLS
Sbjct: 237 VFISFSKICYLHQHLSKSVKLFNEVFGVSLLVLFGNSFLS 276


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,926
Number of Sequences: 336
Number of extensions: 4773
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 35247023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)