Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_J05
         (1251 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0664 - 27066253-27067155,27067242-27067508,27067707-270683...    36   0.067
07_01_0463 + 3502708-3503535                                           33   0.47 
03_05_0999 - 29583959-29584711,29584797-29585021,29585163-295853...    32   0.82 
12_02_0604 + 20920609-20922144                                         31   1.4  

>04_04_0664 -
           27066253-27067155,27067242-27067508,27067707-27068368,
           27068479-27069047,27070011-27070108
          Length = 832

 Score = 35.9 bits (79), Expect = 0.067
 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
 Frame = +1

Query: 271 DAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVD-SEGGKKRVFNTKTLKDQNGQ 432
           D+G  KK KK    +  D +D+E+  ++EN   D ++G ++ V N +   +++G+
Sbjct: 279 DSGKKKKKKKAARKMSSDEDDIEVEENEENTDNDGNDGNEEHVENEENEGNKSGE 333


>07_01_0463 + 3502708-3503535
          Length = 275

 Score = 33.1 bits (72), Expect = 0.47
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
 Frame = +1

Query: 196 KMLGVKDEEKPAGSEV---MESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEM-SSDDENV 363
           K  G +DE+K    EV   +  ++ + LD+ D  KS    +D +KD E+ +    DDE+ 
Sbjct: 37  KSSGDEDEKKEIEIEVKAKIVDKEEVKLDSDDGAKSAVKSKDSKKDKENKKSDKKDDEHD 96

Query: 364 VVDSEGGKKRVFNTKTLKDQN 426
             D EG KK     +  KD++
Sbjct: 97  DEDEEGKKKEKEMKEKKKDKS 117


>03_05_0999 -
           29583959-29584711,29584797-29585021,29585163-29585360,
           29585472-29586056
          Length = 586

 Score = 32.3 bits (70), Expect = 0.82
 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = +1

Query: 205 GVKDEEKPAGSEVMESEQ-VIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDE 357
           G +D+   A    +E E  V   D G +KKSK+ LE  E++ ++V+  SD+E
Sbjct: 76  GGQDDAATASHHAVEGENGVADADGGGVKKSKEELE--EEEQQEVDWRSDEE 125


>12_02_0604 + 20920609-20922144
          Length = 511

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
 Frame = +1

Query: 148 AIKRXRYAVKXLARLKKMLGVKDEEKPAGSEVMESEQV-IFLDAGDLKKSKKVLEDIEKD 324
           A+K+ R +   + RL   LGV  +EK A ++  ++E+  I  + G+LK+  + ++  +  
Sbjct: 307 AVKKHRASEAEVERLCAELGVLTKEKEAAAKAFDAEKAGIMREFGELKQKVEEIQASKGA 366

Query: 325 NEDVEMSSDDENVVVDSE 378
            E+     D + V + +E
Sbjct: 367 AEEAGREKDAQAVKLRNE 384


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,826,968
Number of Sequences: 37544
Number of extensions: 377469
Number of successful extensions: 1234
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1115
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3864364464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)