Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_J05
(1251 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical pr... 36 0.079
U42436-9|AAF99893.1| 109|Caenorhabditis elegans Hypothetical pr... 34 0.24
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 33 0.56
Z70783-10|CAC70122.1| 1037|Caenorhabditis elegans Hypothetical p... 31 1.3
Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical pr... 31 1.7
L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans chrom... 31 1.7
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 31 2.3
Z72512-4|CAA96666.1| 328|Caenorhabditis elegans Hypothetical pr... 31 2.3
Z70684-2|CAA94596.1| 268|Caenorhabditis elegans Hypothetical pr... 31 2.3
U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 31 2.3
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 31 2.3
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 2.3
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 2.3
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 30 3.0
U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical pr... 30 3.0
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 30 3.0
Z50044-7|CAA90359.1| 1415|Caenorhabditis elegans Hypothetical pr... 30 3.9
AF038615-3|AAB94144.1| 328|Caenorhabditis elegans Hypothetical ... 30 3.9
AF035197-1|AAC17865.1| 1415|Caenorhabditis elegans ZYG-9 protein. 30 3.9
Z77663-17|CAB54256.5| 500|Caenorhabditis elegans Hypothetical p... 29 5.2
AL021346-4|CAB54259.5| 500|Caenorhabditis elegans Hypothetical ... 29 5.2
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 29 6.9
EF473218-1|ABQ42570.1| 765|Caenorhabditis elegans Y55D9A.1c pro... 29 6.9
EF473217-1|ABQ42569.1| 818|Caenorhabditis elegans Y55D9A.1b pro... 29 6.9
AL032649-5|CAM82814.1| 765|Caenorhabditis elegans Hypothetical ... 29 6.9
AL032649-2|CAC70120.1| 818|Caenorhabditis elegans Hypothetical ... 29 6.9
AL032649-1|CAA21701.1| 816|Caenorhabditis elegans Hypothetical ... 29 6.9
AF063007-6|AAC16427.2| 523|Caenorhabditis elegans Taf (tbp-asso... 29 6.9
Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical pr... 29 9.1
U23454-2|AAC46519.2| 368|Caenorhabditis elegans Hypothetical pr... 29 9.1
AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical ... 29 9.1
>Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical
protein F54C9.9 protein.
Length = 740
Score = 35.5 bits (78), Expect = 0.079
Identities = 15/52 (28%), Positives = 31/52 (59%)
Frame = +1
Query: 238 EVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKR 393
+V + ++++ +D G K K+ +ED + + E EM+ ++N D+E KK+
Sbjct: 588 DVNKKKRILSIDFGGKKSLKRKMEDEQMEKEMAEMNDQNDNTEEDAEKKKKK 639
Score = 29.1 bits (62), Expect = 6.9
Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Frame = +1
Query: 214 DEEKPAGSEVMESEQVIF--LDAGDLKKSKKVLEDIEKDNEDVEMSSDDEN 360
++EKP S++ +S+ + LD +LK+ ++ +D D+E+ E S DDE+
Sbjct: 401 EDEKPIFSDMEDSDYEDYDNLDVDELKREEQEADD---DDEEDEESVDDED 448
>U42436-9|AAF99893.1| 109|Caenorhabditis elegans Hypothetical
protein C49H3.3 protein.
Length = 109
Score = 33.9 bits (74), Expect = 0.24
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +1
Query: 106 MAXSIRXRWKRKCRAIKRXRYAVKXLARLKKMLGVKDEEKPAGSEVMESE 255
MA S+R ++KR+ RAI R + K A L+K + +DE + +E +++
Sbjct: 1 MAKSLRSKFKRRVRAIARTKKEPKTAALLQKAIDKRDEYEKQDAEKTKTD 50
Score = 32.3 bits (70), Expect = 0.74
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +1
Query: 286 KKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPVWL 447
K+ + +D EK D ++++E + V S+ NTKTLK ++G +P WL
Sbjct: 35 KRDEYEKQDAEKTKTDG--TANEEKMEVTSQA----TINTKTLKKKDGSFPAWL 82
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 32.7 bits (71), Expect = 0.56
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +1
Query: 214 DEEKPAGSEVMESEQVIFLDAGDLKKSKKVLED--IEKDNEDVEMSSDDENVVVDSE 378
D+E+ E ES+ DA +KKS V ED E+D E++EM +DE D E
Sbjct: 262 DDEEDDDEEEEESDD----DAPQVKKSVAVEEDEEDEEDEEEIEMDEEDEEEEEDEE 314
>Z70783-10|CAC70122.1| 1037|Caenorhabditis elegans Hypothetical
protein ZK856.13 protein.
Length = 1037
Score = 31.5 bits (68), Expect = 1.3
Identities = 24/83 (28%), Positives = 35/83 (42%)
Frame = +1
Query: 190 LKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVV 369
LK+ LG K + + V E E++ D D +D E+D+EDVE+ D E V
Sbjct: 107 LKEELGAKQKRSARNNVVDEVEEI---DTAD--------DDEEEDDEDVELMEDVEEVST 155
Query: 370 DSEGGKKRVFNTKTLKDQNGQYP 438
G F + D+ P
Sbjct: 156 SQHAGSSYSFQSAGPSDRYDALP 178
>Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical
protein T05D4.5 protein.
Length = 482
Score = 31.1 bits (67), Expect = 1.7
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Frame = +1
Query: 127 RWKRKCRAIKRXRYAV---KXLARLKKMLGVKDEEKP-AGSEVM-ESEQVIFLDAGDLKK 291
R KRK K+ + A K A KK +DE+K AG E ++E DAGD KK
Sbjct: 398 RTKRKEEEEKKKKDAEEKKKKDAEEKKKKDAEDEKKKDAGDEKKKDAEDEKKKDAGDEKK 457
Query: 292 SKKVLEDIEKDNEDVEMSSDDE 357
K E +KD E+ + +++E
Sbjct: 458 KKDAGEKKKKDAEEKKKVAEEE 479
>L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans
chromodomain proteinprotein 1 protein.
Length = 304
Score = 31.1 bits (67), Expect = 1.7
Identities = 16/47 (34%), Positives = 30/47 (63%)
Frame = +1
Query: 211 KDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSD 351
++EE G + ES++V DLK+ +K+ ED +++ EDV++ S+
Sbjct: 166 EEEESVEGEDEEESQEV-----EDLKEDEKMEEDEKEEEEDVQLESE 207
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 30.7 bits (66), Expect = 2.3
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 166 YAVKXLARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKK 300
Y K R + G+ +EEK G + E E+ ++A D KKS K
Sbjct: 586 YEEKRKERKNRQQGITEEEKDDGEVIEEEEKPKEVEAEDKKKSSK 630
>Z72512-4|CAA96666.1| 328|Caenorhabditis elegans Hypothetical
protein R07B5.6 protein.
Length = 328
Score = 30.7 bits (66), Expect = 2.3
Identities = 12/37 (32%), Positives = 25/37 (67%)
Frame = -1
Query: 459 LTFVQPNRVLSVLIFQGFRIKNSFLAAFTIDHNVFII 349
LT++ P V+ + IF FR + + +A T++H++++I
Sbjct: 29 LTYMTPTIVVMLKIFMSFRGPSHWNSAHTMNHHIYVI 65
>Z70684-2|CAA94596.1| 268|Caenorhabditis elegans Hypothetical
protein F28D1.2 protein.
Length = 268
Score = 30.7 bits (66), Expect = 2.3
Identities = 15/82 (18%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 190 LKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVV 369
+K++ ++D+ + + ++ + ++ G L+ KK++ D++K N+D+ + E
Sbjct: 182 MKRLEELEDKHRFEEALTLKIQAMMIETTGQLEAQKKIIADLQKKNDDLMKEEEGEEDYE 241
Query: 370 DSEGGK-KRVFNTKTLKDQNGQ 432
+ E + + F + D+ G+
Sbjct: 242 EEENYEVEEDFEDEEEYDEEGE 263
>U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical
protein F55F8.3 protein.
Length = 910
Score = 30.7 bits (66), Expect = 2.3
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 283 LKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEG 381
+++SKK ++ E++ EDV SDDE++ +S G
Sbjct: 864 IRQSKKSVKKEEEEEEDVSDESDDEDIEDESAG 896
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 30.7 bits (66), Expect = 2.3
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = +1
Query: 208 VKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGK 387
+K EE+ A E+ LDA +K+ + +EKD++ + S E V E K
Sbjct: 9708 LKLEEESAAKSKQTVEEQAKLDAQTKEKTAEKQTGLEKDDKSTKDSESKETV---DEKPK 9764
Query: 388 KRVFNTKTLKDQN 426
K+V KT K +
Sbjct: 9765 KKVLKKKTEKSDS 9777
Score = 30.3 bits (65), Expect = 3.0
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = +1
Query: 208 VKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGK 387
+K EE+ A +E+ LDA K+ + +EKD + + S +E V E K
Sbjct: 9458 LKLEEQSAAKSKQAAEEQAKLDAQTKAKAAEKQTGLEKDEKSNKDSGSNETV---EEKPK 9514
Query: 388 KRVFNTKTLKDQN 426
K+V KT K +
Sbjct: 9515 KKVLKKKTEKSDS 9527
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 30.7 bits (66), Expect = 2.3
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = +1
Query: 208 VKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGK 387
+K EE+ A E+ LDA +K+ + +EKD++ + S E V E K
Sbjct: 9728 LKLEEESAAKSKQTVEEQAKLDAQTKEKTAEKQTGLEKDDKSTKDSESKETV---DEKPK 9784
Query: 388 KRVFNTKTLKDQN 426
K+V KT K +
Sbjct: 9785 KKVLKKKTEKSDS 9797
Score = 30.7 bits (66), Expect = 2.3
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +1
Query: 175 KXLARLKKMLG-VKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSD 351
K A K G +K EE+ A E+ LDA K+ + +EKD + + S
Sbjct: 13349 KLEANKKSAAGKLKIEEESAAKSKQTVEEQAKLDAQTKAKTAEKQTKLEKDEKSTKESES 13408
Query: 352 DENVVVDSEGGKKRVFNTKTLKDQN 426
E V E KK+V KT K +
Sbjct: 13409 KETV---DEKPKKKVLKKKTEKSDS 13430
Score = 30.3 bits (65), Expect = 3.0
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = +1
Query: 208 VKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGK 387
+K EE+ A +E+ LDA K+ + +EKD + + S +E V E K
Sbjct: 9478 LKLEEQSAAKSKQAAEEQAKLDAQTKAKAAEKQTGLEKDEKSNKDSGSNETV---EEKPK 9534
Query: 388 KRVFNTKTLKDQN 426
K+V KT K +
Sbjct: 9535 KKVLKKKTEKSDS 9547
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 30.7 bits (66), Expect = 2.3
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = +1
Query: 208 VKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGK 387
+K EE+ A E+ LDA +K+ + +EKD++ + S E V E K
Sbjct: 9728 LKLEEESAAKSKQTVEEQAKLDAQTKEKTAEKQTGLEKDDKSTKDSESKETV---DEKPK 9784
Query: 388 KRVFNTKTLKDQN 426
K+V KT K +
Sbjct: 9785 KKVLKKKTEKSDS 9797
Score = 30.7 bits (66), Expect = 2.3
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +1
Query: 175 KXLARLKKMLG-VKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSD 351
K A K G +K EE+ A E+ LDA K+ + +EKD + + S
Sbjct: 13349 KLEANKKSAAGKLKIEEESAAKSKQTVEEQAKLDAQTKAKTAEKQTKLEKDEKSTKESES 13408
Query: 352 DENVVVDSEGGKKRVFNTKTLKDQN 426
E V E KK+V KT K +
Sbjct: 13409 KETV---DEKPKKKVLKKKTEKSDS 13430
Score = 30.3 bits (65), Expect = 3.0
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = +1
Query: 208 VKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGK 387
+K EE+ A +E+ LDA K+ + +EKD + + S +E V E K
Sbjct: 9478 LKLEEQSAAKSKQAAEEQAKLDAQTKAKAAEKQTGLEKDEKSNKDSGSNETV---EEKPK 9534
Query: 388 KRVFNTKTLKDQN 426
K+V KT K +
Sbjct: 9535 KKVLKKKTEKSDS 9547
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
C35C5.1 protein.
Length = 2962
Score = 30.3 bits (65), Expect = 3.0
Identities = 22/99 (22%), Positives = 47/99 (47%)
Frame = +1
Query: 145 RAIKRXRYAVKXLARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKD 324
R ++ L RL+K +++E+ E E +++ L++++K+ +IEK+
Sbjct: 1187 RRVREEEEEKMRLERLRKAEREREQERLKREEEEERKRL-----EQLREAEKLKAEIEKE 1241
Query: 325 NEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPV 441
NE ++ + ++ E + + TLKD G P+
Sbjct: 1242 NER-KLQEERTRKALELERKIEEIKRVSTLKDMFGPLPI 1279
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 30.3 bits (65), Expect = 3.0
Identities = 22/99 (22%), Positives = 47/99 (47%)
Frame = +1
Query: 145 RAIKRXRYAVKXLARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKD 324
R ++ L RL+K +++E+ E E +++ L++++K+ +IEK+
Sbjct: 1187 RRVREEEEEKMRLERLRKAEREREQERLKREEEEERKRL-----EQLREAEKLKAEIEKE 1241
Query: 325 NEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPV 441
NE ++ + ++ E + + TLKD G P+
Sbjct: 1242 NER-KLQEERTRKALELERKIEEIKRVSTLKDMFGPLPI 1279
>U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical
protein C34F11.5 protein.
Length = 894
Score = 30.3 bits (65), Expect = 3.0
Identities = 16/67 (23%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Frame = +1
Query: 127 RWKRKCRAIKRXRYAVKXLARLKKMLGVKDE-EKPAGSEVMESEQVIFL----DAGDLKK 291
R K+K + +KR ++ + R+ K + K + +K G +V++ ++++ A KK
Sbjct: 639 RIKKKTKRVKRGKFVRPLMPRIPKFVAKKKKLKKVDGKKVLKRKEIVLTLKVRKASTAKK 698
Query: 292 SKKVLED 312
+KK +++
Sbjct: 699 TKKAMQE 705
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 30.3 bits (65), Expect = 3.0
Identities = 22/99 (22%), Positives = 47/99 (47%)
Frame = +1
Query: 145 RAIKRXRYAVKXLARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKD 324
R ++ L RL+K +++E+ E E +++ L++++K+ +IEK+
Sbjct: 1187 RRVREEEEEKMRLERLRKAEREREQERLKREEEEERKRL-----EQLREAEKLKAEIEKE 1241
Query: 325 NEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPV 441
NE ++ + ++ E + + TLKD G P+
Sbjct: 1242 NER-KLQEERTRKALELERKIEEIKRVSTLKDMFGPLPI 1279
>Z50044-7|CAA90359.1| 1415|Caenorhabditis elegans Hypothetical
protein F22B5.7 protein.
Length = 1415
Score = 29.9 bits (64), Expect = 3.9
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 217 EEKPAGSEVMESE-QVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKR 393
+++P EV+E E + + GD KK V E+ ++NE ++ E ++ D+E K+R
Sbjct: 558 KKQPEDEEVVEEEDEPLKPPPGDKKKKVPVKEN--EENEPPVVAPKAELLLSDNEDKKQR 615
Query: 394 VFNTKTLK 417
+ K LK
Sbjct: 616 IKEEKQLK 623
>AF038615-3|AAB94144.1| 328|Caenorhabditis elegans Hypothetical
protein R02D3.5 protein.
Length = 328
Score = 29.9 bits (64), Expect = 3.9
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Frame = +1
Query: 226 PAGSEVMESEQVIFLDAG-DLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEG----GKK 390
PA V + +V + G DLKK + L DI +++ +V++ G +
Sbjct: 74 PANYTVWQYRRVCLTELGWDLKKEMRYLSDIIQESPKNYQVWHHRRFIVETIGESAVNDE 133
Query: 391 RVFNTKTLKDQNGQYPVWLH 450
F ++ ++D+N Y W H
Sbjct: 134 LHFCSEVIRDENKNYHAWQH 153
>AF035197-1|AAC17865.1| 1415|Caenorhabditis elegans ZYG-9 protein.
Length = 1415
Score = 29.9 bits (64), Expect = 3.9
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 217 EEKPAGSEVMESE-QVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKR 393
+++P EV+E E + + GD KK V E+ ++NE ++ E ++ D+E K+R
Sbjct: 558 KKQPEDEEVVEEEDEPLKPPPGDKKKKVPVKEN--EENEPPVVAPKAELLLSDNEDKKQR 615
Query: 394 VFNTKTLK 417
+ K LK
Sbjct: 616 IKEEKQLK 623
>Z77663-17|CAB54256.5| 500|Caenorhabditis elegans Hypothetical
protein F53F4.14 protein.
Length = 500
Score = 29.5 bits (63), Expect = 5.2
Identities = 19/99 (19%), Positives = 43/99 (43%)
Frame = +1
Query: 133 KRKCRAIKRXRYAVKXLARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLED 312
KRK + K K + + L ++E + E+ + L+ + K E+
Sbjct: 226 KRKAKLEKLTAGPAKHMFEDQDYLSRREEIINKTEDACEAGFALMLEMKRNSRKSKEQEN 285
Query: 313 IEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNG 429
++ED +++++D + + GG+KR ++ + G
Sbjct: 286 KNDEDEDDDVNAEDVTDLFNDRGGRKRKIAAPSIGEDGG 324
>AL021346-4|CAB54259.5| 500|Caenorhabditis elegans Hypothetical
protein F53F4.14 protein.
Length = 500
Score = 29.5 bits (63), Expect = 5.2
Identities = 19/99 (19%), Positives = 43/99 (43%)
Frame = +1
Query: 133 KRKCRAIKRXRYAVKXLARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLED 312
KRK + K K + + L ++E + E+ + L+ + K E+
Sbjct: 226 KRKAKLEKLTAGPAKHMFEDQDYLSRREEIINKTEDACEAGFALMLEMKRNSRKSKEQEN 285
Query: 313 IEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNG 429
++ED +++++D + + GG+KR ++ + G
Sbjct: 286 KNDEDEDDDVNAEDVTDLFNDRGGRKRKIAAPSIGEDGG 324
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 29.1 bits (62), Expect = 6.9
Identities = 22/80 (27%), Positives = 38/80 (47%)
Frame = +1
Query: 193 KKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVD 372
KK ++D++K + + E+ + KK KK ED E++ + + D++N D
Sbjct: 120 KKRKQMRDKKKQEEEDKKKEEE----EKDKKKKDKKKEEDDEEEEQKDKKKKDEKNDDDD 175
Query: 373 SEGGKKRVFNTKTLKDQNGQ 432
E KK + K KD N +
Sbjct: 176 EEDKKK---DKKKKKDDNDE 192
>EF473218-1|ABQ42570.1| 765|Caenorhabditis elegans Y55D9A.1c
protein.
Length = 765
Score = 29.1 bits (62), Expect = 6.9
Identities = 14/58 (24%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Frame = +1
Query: 214 DEEKPAGSEVMESEQVIFLDAGDLKKSKK---VLEDIEKDNEDVEMSSDDENVVVDSE 378
+E P ++++ + +++ D+++S++ ++ EK+N+ +DDE +VVD E
Sbjct: 117 EESSPTAIRMLKTAPIERMESTDVEESEEETVMMTTDEKENQKKPNENDDEVMVVDEE 174
>EF473217-1|ABQ42569.1| 818|Caenorhabditis elegans Y55D9A.1b
protein.
Length = 818
Score = 29.1 bits (62), Expect = 6.9
Identities = 14/58 (24%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Frame = +1
Query: 214 DEEKPAGSEVMESEQVIFLDAGDLKKSKK---VLEDIEKDNEDVEMSSDDENVVVDSE 378
+E P ++++ + +++ D+++S++ ++ EK+N+ +DDE +VVD E
Sbjct: 119 EESSPTAIRMLKTAPIERMESTDVEESEEETVMMTTDEKENQKKPNENDDEVMVVDEE 176
>AL032649-5|CAM82814.1| 765|Caenorhabditis elegans Hypothetical
protein Y55D9A.1c protein.
Length = 765
Score = 29.1 bits (62), Expect = 6.9
Identities = 14/58 (24%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Frame = +1
Query: 214 DEEKPAGSEVMESEQVIFLDAGDLKKSKK---VLEDIEKDNEDVEMSSDDENVVVDSE 378
+E P ++++ + +++ D+++S++ ++ EK+N+ +DDE +VVD E
Sbjct: 117 EESSPTAIRMLKTAPIERMESTDVEESEEETVMMTTDEKENQKKPNENDDEVMVVDEE 174
>AL032649-2|CAC70120.1| 818|Caenorhabditis elegans Hypothetical
protein Y55D9A.1b protein.
Length = 818
Score = 29.1 bits (62), Expect = 6.9
Identities = 14/58 (24%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Frame = +1
Query: 214 DEEKPAGSEVMESEQVIFLDAGDLKKSKK---VLEDIEKDNEDVEMSSDDENVVVDSE 378
+E P ++++ + +++ D+++S++ ++ EK+N+ +DDE +VVD E
Sbjct: 119 EESSPTAIRMLKTAPIERMESTDVEESEEETVMMTTDEKENQKKPNENDDEVMVVDEE 176
>AL032649-1|CAA21701.1| 816|Caenorhabditis elegans Hypothetical
protein Y55D9A.1a protein.
Length = 816
Score = 29.1 bits (62), Expect = 6.9
Identities = 14/58 (24%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Frame = +1
Query: 214 DEEKPAGSEVMESEQVIFLDAGDLKKSKK---VLEDIEKDNEDVEMSSDDENVVVDSE 378
+E P ++++ + +++ D+++S++ ++ EK+N+ +DDE +VVD E
Sbjct: 117 EESSPTAIRMLKTAPIERMESTDVEESEEETVMMTTDEKENQKKPNENDDEVMVVDEE 174
>AF063007-6|AAC16427.2| 523|Caenorhabditis elegans Taf
(tbp-associated transcriptionfactor) family protein 4
protein.
Length = 523
Score = 29.1 bits (62), Expect = 6.9
Identities = 12/54 (22%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +1
Query: 280 DLKKSKKVLEDIEKDNEDVEMSSDDENVV---VDSEGGKKRVFNTKTLKDQNGQ 432
D+K+ + LED+++ E++ S + E+++ + GK+ + K ++ Q+ +
Sbjct: 393 DVKRQLRFLEDLDRQEEELRESREKESLIRMSKNKNSGKETIEKAKEMQRQDAE 446
>Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical
protein Y53C12B.1 protein.
Length = 793
Score = 28.7 bits (61), Expect = 9.1
Identities = 15/61 (24%), Positives = 33/61 (54%)
Frame = +1
Query: 241 VMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKD 420
+ + +I LD +LK +++++ ++ + D+ ++ V S + R++NTKTL
Sbjct: 294 ISAEQNLIILDFENLKIARQIVGFHDEIYSCCLLGKDESHMAVASNTSEIRLYNTKTLDC 353
Query: 421 Q 423
Q
Sbjct: 354 Q 354
>U23454-2|AAC46519.2| 368|Caenorhabditis elegans Hypothetical
protein C10A4.5 protein.
Length = 368
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = +1
Query: 235 SEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDEN 360
S + +S V ++ + S+ ++ +K+++DVE SSD+EN
Sbjct: 323 SSLYQSVVVNEIELQNTSSSQSETQEYDKEDKDVEESSDEEN 364
>AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical
protein W09G12.7 protein.
Length = 368
Score = 28.7 bits (61), Expect = 9.1
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = +1
Query: 211 KDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKK 390
K +K + S+ D G KK KK +D D+ D SSD + D + KK
Sbjct: 103 KKSKKDSSDSSDSSDSSDSSDDGKKKKKKKSKKDSSDDSSDSSDSSDSSDSSDDDKKKKK 162
Query: 391 RVFNTK 408
+ +K
Sbjct: 163 KSKKSK 168
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,173,912
Number of Sequences: 27780
Number of extensions: 288483
Number of successful extensions: 1393
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1232
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3474674514
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -