Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_J04
         (1292 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ...    58   7e-07
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi...    46   0.002
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ...    42   0.046
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0...    36   1.7  
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ...    35   5.3  
UniRef50_P78621 Cluster: Cytokinesis protein sepA; n=14; Fungi/M...    32   5.4  

>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
           root|Rep: Putative uncharacterized protein - Salmonella
           typhimurium
          Length = 127

 Score = 57.6 bits (133), Expect = 7e-07
 Identities = 28/46 (60%), Positives = 31/46 (67%)
 Frame = +2

Query: 584 TIGPAPLTXITKINPXVRGGKTRXXXXXTXRFPLEPPSXALXSXPC 721
           +IG APLT ITKI+  VRGG+TR     T RFPLE PS AL   PC
Sbjct: 17  SIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPC 62



 Score = 55.2 bits (127), Expect = 3e-06
 Identities = 23/45 (51%), Positives = 25/45 (55%)
 Frame = +3

Query: 717 PAXIPXXCPPFTXREAWXXLIPXXKGIPXRCXPXEKXWAVXTNPP 851
           P  +P  CPPF+ REAW  LI    GI  RC      WAV TNPP
Sbjct: 61  PCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPP 105


>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
           organisms|Rep: Predicted protein - Nematostella
           vectensis
          Length = 97

 Score = 46.4 bits (105), Expect = 0.002
 Identities = 23/45 (51%), Positives = 27/45 (60%)
 Frame = +2

Query: 584 TIGPAPLTXITKINPXVRGGKTRXXXXXTXRFPLEPPSXALXSXP 718
           +IG APLT ITK +  + GG+TR     T RFPL  PS AL   P
Sbjct: 53  SIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97


>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli
          Length = 147

 Score = 41.5 bits (93), Expect = 0.046
 Identities = 21/45 (46%), Positives = 25/45 (55%)
 Frame = +2

Query: 584 TIGPAPLTXITKINPXVRGGKTRXXXXXTXRFPLEPPSXALXSXP 718
           +IG APLT I K +  + GG+TR       RFPL  PS AL   P
Sbjct: 85  SIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLP 129


>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
           CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
           BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
           Citrobacter koseri ATCC BAA-895
          Length = 125

 Score = 36.3 bits (80), Expect = 1.7
 Identities = 21/59 (35%), Positives = 24/59 (40%)
 Frame = +3

Query: 675 VSPWNLPRGLSXPXPAXIPXXCPPFTXREAWXXLIPXXKGIPXRCXPXEKXWAVXTNPP 851
           VS  +LP  LS   PA      PPF+   +         GI  RC      WAV  NPP
Sbjct: 37  VSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCRSFAPSWAVSKNPP 95


>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
           Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
           Beggiatoa sp. SS
          Length = 114

 Score = 34.7 bits (76), Expect = 5.3
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = +2

Query: 599 PLTXITKINPXVRGGKTRXXXXXTXRFPLEPPSXALXSXP 718
           PLT ITKI P  +  +T+     T  FPL+ PS +L   P
Sbjct: 75  PLTTITKIYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114


>UniRef50_P78621 Cluster: Cytokinesis protein sepA; n=14;
            Fungi/Metazoa group|Rep: Cytokinesis protein sepA -
            Emericella nidulans (Aspergillus nidulans)
          Length = 1790

 Score = 32.3 bits (70), Expect(2) = 5.4
 Identities = 14/32 (43%), Positives = 14/32 (43%)
 Frame = -3

Query: 411  GXGRAPXXPPAXPRELXDSLXXXXPPTPPPXP 316
            G G AP  PP  P      L    PP PPP P
Sbjct: 1046 GAGAAPPPPPPPPPPPPGGLGGPPPPPPPPPP 1077



 Score = 21.0 bits (42), Expect(2) = 5.4
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -3

Query: 339  PPTPPPXPXTXF 304
            PP PPP P   F
Sbjct: 1097 PPPPPPPPGGAF 1108


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,666,440
Number of Sequences: 1657284
Number of extensions: 6099508
Number of successful extensions: 19430
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18680
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 132414320193
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)