Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_J01
         (1185 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0371 + 22774245-22774413,22774504-22774670,22775538-227756...    47   3e-05
10_02_0165 - 6063944-6064552                                           31   1.3  
07_03_1555 - 27669981-27670148,27670232-27670315,27670349-276703...    30   4.1  
06_03_0599 + 22632625-22633030,22634733-22636724,22636819-22637171     30   4.1  
07_03_0716 + 20905041-20905851,20906644-20906825,20907117-209073...    29   9.4  

>11_06_0371 + 22774245-22774413,22774504-22774670,22775538-22775631,
            22775723-22775871,22775950-22776042,22776167-22776235,
            22776236-22776415,22776465-22776518,22776739-22776905,
            22777180-22777314,22777386-22777479,22777567-22777848
          Length = 550

 Score = 46.8 bits (106), Expect = 3e-05
 Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 16/139 (11%)
 Frame = +2

Query: 665  GHKSYYFFGXXXXXXXXXIKYTVKKLLDDGFQLISVPDILASNVLESCGMSVKSDRTQIY 844
            G K YY            + + + ++   GF  +  P+I+ S+V+E CG   ++  TQ+ 
Sbjct: 250  GSKFYYLKNEAVLLEMALVNWAITEVSKKGFTPLITPEIVRSSVVEKCGFQPRAQNTQLL 309

Query: 845  SL----DPHHH----------GTDLXLSGTAEMSLAGLLANSVHNINDXPLKLAAVSRCX 982
             L      + H           +D  L GTAE+ + G+  +S+   +D P K  A S C 
Sbjct: 310  ELVVLGGSYAHNFKKKVYSIDNSDQCLIGTAEIPVGGIHMDSILPDSDLPRKYVAYSHCF 369

Query: 983  XXXXXXXXXXXD--YRVHQ 1033
                          YRVHQ
Sbjct: 370  RTEAGAAGAATRGLYRVHQ 388


>10_02_0165 - 6063944-6064552
          Length = 202

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
 Frame = +2

Query: 767 SVPDILASNVLESCGMSVKSDRTQIYSLDPHHHGTD----LXLSGTAEMSLAGLLANSVH 934
           ++ D+    +L  CG+S+  D    + + P+H   D    L L+G  E S   LL+   H
Sbjct: 69  AIRDVFREALLRLCGISIPLDVANSFGMHPYHEEDDSRCRLRLTGEPEGSRCTLLSELAH 128


>07_03_1555 - 27669981-27670148,27670232-27670315,27670349-27670360,
            27670683-27670761,27670840-27671078,27671167-27671260,
            27671342-27671484,27671688-27671786,27671870-27671998,
            27672123-27672197,27672308-27672520,27672581-27672676,
            27673282-27673380,27673600-27673839,27674212-27674322,
            27674429-27674626,27674720-27674835,27675076-27675193,
            27675761-27675866,27675972-27676030,27676259-27676388,
            27676730-27676887,27677672-27677887,27677972-27678082,
            27678313-27678472,27679364-27679509,27679603-27679695,
            27680610-27680706,27681224-27681294,27681407-27681505,
            27682037-27682168,27682287-27682729,27683252-27683564,
            27684301-27684549
          Length = 1631

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
 Frame = +2

Query: 608  SEITRLLNLMRIEKLGHTCGHKSYYFFGXXXXXXXXXIKYTVKKL----LDDGFQLISVP 775
            S + ++L+ M I  L   CG + +  +G            +V K+    LD+ F    V 
Sbjct: 810  SGLLKILSKMGISLLSSYCGAQIFEIYGLGQEVVDLAFCGSVSKIGGLTLDEKFFYSIVK 869

Query: 776  DILASNVLESCGMSVKSDRTQIYSLDPH 859
            DI   ++ E CGM   + +      DPH
Sbjct: 870  DIPVISLHEFCGMEFWAAQACDPGFDPH 897


>06_03_0599 + 22632625-22633030,22634733-22636724,22636819-22637171
          Length = 916

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 287 FKRFFSQIYPNYNLQYYCNPKNHEEIKQ 370
           FK      +PN NL  + +PK+HE I Q
Sbjct: 686 FKAIVFPYFPNGNLDMWLHPKSHEHISQ 713


>07_03_0716 +
           20905041-20905851,20906644-20906825,20907117-20907330,
           20907416-20907653,20907905-20908058,20908190-20908461,
           20908703-20908808
          Length = 658

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -2

Query: 335 NIVSYNWDKFVRKIF*SLWCCRQYGNSELVKRCI 234
           N++SY W  +       L CCR   N ++++RCI
Sbjct: 529 NLISYAWQLWRSGQGHELVCCRIGNNHKVIQRCI 562


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,670,267
Number of Sequences: 37544
Number of extensions: 417125
Number of successful extensions: 968
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3608292120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)