Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_J01
         (1185 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119252-1|AAM51112.1|  417|Drosophila melanogaster SD21818p pro...   137   2e-32
AE014297-2015|AAF55175.1|  417|Drosophila melanogaster CG4938-PA...   137   2e-32
Y14823-2|CAA75101.1|  322|Drosophila melanogaster seryl-tRNA syn...   125   1e-28

>AY119252-1|AAM51112.1|  417|Drosophila melanogaster SD21818p protein.
          Length = 417

 Score =  137 bits (332), Expect = 2e-32
 Identities = 82/228 (35%), Positives = 127/228 (55%), Gaps = 2/228 (0%)
 Frame = +2

Query: 356  EEIKQNIKIRKGVGDIDRVMQLYKIITKTSEDNHEYERIKQDLYEALSILPNKTHPFVEG 535
            +E+++N+ +R    ++  +  L + +   + D H+  +++ +L +    LPN THP +  
Sbjct: 42   DELERNVVVRHHKNNVPLIRSLIQELD--AGDQHKLRQLQAELEQ----LPNATHPRLRD 95

Query: 536  KFE-PHIVHEINKKKDFGEYKPFEFSEITRLLNLMRIEKLGHTCGHKSYYFFGXXXXXXX 712
              E P  + +   ++   + +  EFSE+ R LNL R++ LG+  GHKSYY  G       
Sbjct: 96   YGEEPRELAQYVHRQLTPQSRLKEFSELARALNLYRMDHLGNYTGHKSYYLTGQLATLEQ 155

Query: 713  XXIKYTVKKLLDDGFQLISVPDILASNVLESCGMSVKSDRTQIYSLDPHHHGTDLXLSGT 892
              I+Y ++ + + GF+LISVPDIL   V+ESCGM  + +RTQ+Y LD     T   LSGT
Sbjct: 156  AIIQYALQAVTEHGFKLISVPDILPKEVIESCGMRTEGERTQVYKLD-----TGECLSGT 210

Query: 893  AEMSLAGLLANSVHNINDXPLKLAAVSRCXXXXXXXXXXXXD-YRVHQ 1033
            +EM+LAG  AN + + +  PLK+ AVSRC              YRVHQ
Sbjct: 211  SEMALAGFFANKLLSEDQLPLKVTAVSRCYRAETSGLQEEKGIYRVHQ 258


>AE014297-2015|AAF55175.1|  417|Drosophila melanogaster CG4938-PA
            protein.
          Length = 417

 Score =  137 bits (332), Expect = 2e-32
 Identities = 82/228 (35%), Positives = 127/228 (55%), Gaps = 2/228 (0%)
 Frame = +2

Query: 356  EEIKQNIKIRKGVGDIDRVMQLYKIITKTSEDNHEYERIKQDLYEALSILPNKTHPFVEG 535
            +E+++N+ +R    ++  +  L + +   + D H+  +++ +L +    LPN THP +  
Sbjct: 42   DELERNVVVRHHKNNVPLIRSLIQELD--AGDQHKLRQLQAELEQ----LPNATHPRLRD 95

Query: 536  KFE-PHIVHEINKKKDFGEYKPFEFSEITRLLNLMRIEKLGHTCGHKSYYFFGXXXXXXX 712
              E P  + +   ++   + +  EFSE+ R LNL R++ LG+  GHKSYY  G       
Sbjct: 96   YGEEPRELAQYVHRQLTPQSRLKEFSELARALNLYRMDHLGNYTGHKSYYLTGQLATLEQ 155

Query: 713  XXIKYTVKKLLDDGFQLISVPDILASNVLESCGMSVKSDRTQIYSLDPHHHGTDLXLSGT 892
              I+Y ++ + + GF+LISVPDIL   V+ESCGM  + +RTQ+Y LD     T   LSGT
Sbjct: 156  AIIQYALQAVTEHGFKLISVPDILPKEVIESCGMRTEGERTQVYKLD-----TGECLSGT 210

Query: 893  AEMSLAGLLANSVHNINDXPLKLAAVSRCXXXXXXXXXXXXD-YRVHQ 1033
            +EM+LAG  AN + + +  PLK+ AVSRC              YRVHQ
Sbjct: 211  SEMALAGFFANKLLSEDQLPLKVTAVSRCYRAETSGLQEEKGIYRVHQ 258


>Y14823-2|CAA75101.1|  322|Drosophila melanogaster seryl-tRNA
            synthetase protein.
          Length = 322

 Score =  125 bits (301), Expect = 1e-28
 Identities = 67/145 (46%), Positives = 87/145 (60%), Gaps = 1/145 (0%)
 Frame = +2

Query: 602  EFSEITRLLNLMRIEKLGHTCGHKSYYFFGXXXXXXXXXIKYTVKKLLDDGFQLISVPDI 781
            EFSE+ R LNL R++ LG+  GHKSYY  G         I+Y ++ + + GF+LISVPDI
Sbjct: 24   EFSELARALNLYRMDHLGNYTGHKSYYLTGQLATLEQAIIQYALQAVTEHGFKLISVPDI 83

Query: 782  LASNVLESCGMSVKSDRTQIYSLDPHHHGTDLXLSGTAEMSLAGLLANSVHNINDXPLKL 961
            L   V+ESCGM  + +RTQ+Y LD     T   LSGT+EM+LAG  AN + + +  PLK+
Sbjct: 84   LPKEVIESCGMRTEGERTQVYKLD-----TGECLSGTSEMALAGFFANKLLSEDQLPLKV 138

Query: 962  AAVSRCXXXXXXXXXXXXD-YRVHQ 1033
             AVSRC              YRVHQ
Sbjct: 139  TAVSRCYRAETSGLQEEKGIYRVHQ 163


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,611,037
Number of Sequences: 53049
Number of extensions: 748993
Number of successful extensions: 1648
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1642
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 6291255432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)