Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_I24
(1180 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15; ... 133 1e-29
UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative; ... 99 3e-19
UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;... 97 6e-19
UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1; ... 86 2e-15
UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma j... 79 2e-13
UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1; A... 79 2e-13
UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14; ... 78 5e-13
UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putati... 65 4e-09
UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3; Eimer... 64 7e-09
UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative; ... 64 7e-09
UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1; ... 63 1e-08
UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;... 59 2e-07
UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa... 58 6e-07
UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11... 57 8e-07
UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, wh... 55 3e-06
UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia lam... 55 4e-06
UniRef50_A2G448 Cluster: 60s Acidic ribosomal protein; n=2; Tric... 53 1e-05
UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putati... 53 2e-05
UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;... 50 1e-04
UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4; E... 50 1e-04
UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta; n... 50 2e-04
UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion; ... 48 5e-04
UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4; L... 48 6e-04
UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;... 46 0.001
UniRef50_A2DFD3 Cluster: 60S acidic ribosomal protein P1, putati... 40 0.17
UniRef50_Q22XR4 Cluster: 60s Acidic ribosomal protein; n=1; Tetr... 38 0.38
UniRef50_O28780 Cluster: 50S ribosomal protein L12P; n=26; Archa... 34 6.2
>UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Drosophila melanogaster (Fruit fly)
Length = 112
Score = 133 bits (321), Expect = 1e-29
Identities = 69/112 (61%), Positives = 75/112 (66%)
Frame = +3
Query: 90 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLI 269
M +KAELACVY++LILVDDDVAVTGEKI+TILKAA V+V PYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 270 TNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 425
TNIGSGV SDDDMGFGLFD
Sbjct: 61 TNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative;
n=2; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 106
Score = 98.7 bits (235), Expect = 3e-19
Identities = 51/71 (71%), Positives = 58/71 (81%)
Frame = +3
Query: 78 SKLKMVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINV 257
S++K+ + A +C YSALIL DDDVAVT EKISTI A VD+ PYWPGLF KALEGINV
Sbjct: 9 SQVKITAIA--SCAYSALILFDDDVAVTDEKISTI--QANVDIEPYWPGLFTKALEGINV 64
Query: 258 RDLITNIGSGV 290
+DLITNIGSGV
Sbjct: 65 KDLITNIGSGV 75
>UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;
Eukaryota|Rep: 60S acidic ribosomal protein P1 - Homo
sapiens (Human)
Length = 114
Score = 97.5 bits (232), Expect = 6e-19
Identities = 51/114 (44%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
Frame = +3
Query: 90 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLI 269
M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+V P+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 270 TNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 425
N+G+G SDDDMGFGLFD
Sbjct: 61 CNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 85.8 bits (203), Expect = 2e-15
Identities = 47/56 (83%), Positives = 49/56 (87%)
Frame = +3
Query: 117 VYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLITNIGS 284
VYSALILVDD VAVT EKISTILKAA V+ PYW LFAKALEGINV+DLITNIGS
Sbjct: 36 VYSALILVDD-VAVTDEKISTILKAANVE--PYWRALFAKALEGINVKDLITNIGS 88
>UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09468 protein - Schistosoma
japonicum (Blood fluke)
Length = 116
Score = 79.4 bits (187), Expect = 2e-13
Identities = 48/116 (41%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Frame = +3
Query: 93 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVD-VXPYWPGLFAKALEGINVRDLI 269
+SK+ELACVY+AL+L DDD+ VT +KI+TILKAA + V Y P LFA +L G NV+DL+
Sbjct: 1 MSKSELACVYAALMLADDDIDVTADKINTILKAANIKFVESYLPNLFATSLNGKNVKDLL 60
Query: 270 TNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDD----MGFGLFD 425
++GS SDDD +GFGLFD
Sbjct: 61 MSMGSPAPSAAVTSAVPTAASATSAAAEKPKEAVKEEKKVVSDDDSDESIGFGLFD 116
>UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1;
Arabidopsis thaliana|Rep: 60s acidic ribosomal protein
P1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 111
Score = 79.0 bits (186), Expect = 2e-13
Identities = 43/111 (38%), Positives = 55/111 (49%)
Frame = +3
Query: 93 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLIT 272
+S +ELAC Y+ALIL DD + +T E IS ++K A V+V YWP LFAK E N+ DLI
Sbjct: 1 MSTSELACTYAALILHDDGIEITAENISKLVKTANVNVESYWPSLFAKLCEKKNIDDLIM 60
Query: 273 NIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 425
N+G+G S+DDM GLFD
Sbjct: 61 NVGAGGCGVARPVTTAAPTASQSVSIPEEKKNEMEVIKEESEDDMIIGLFD 111
>UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14;
Dikarya|Rep: 60S acidic ribosomal protein P1 -
Cladosporium herbarum (Davidiella tassiana)
Length = 110
Score = 77.8 bits (183), Expect = 5e-13
Identities = 44/112 (39%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Frame = +3
Query: 93 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAV-DVXPYWPGLFAKALEGINVRDLI 269
+S AELA Y+ALIL D+ + +T +K+ ++ AA V ++ P W LFAKALEG +V+DL+
Sbjct: 1 MSAAELASSYAALILADEGLEITADKLQALISAAKVPEIEPIWTSLFAKALEGKDVKDLL 60
Query: 270 TNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 425
N+GSG SDDDMGFGLFD
Sbjct: 61 LNVGSG--GGAAPAAGGAAAGGAAAVLDAPAEEKAEEEKEESDDDMGFGLFD 110
>UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putative;
n=2; Theileria|Rep: 60S acidic ribosomal protein P1,
putative - Theileria parva
Length = 117
Score = 64.9 bits (151), Expect = 4e-09
Identities = 31/70 (44%), Positives = 48/70 (68%)
Frame = +3
Query: 78 SKLKMVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINV 257
S+L + EL CVYS+L+L DD + VT + I ++KAA D+ P+ P LFA+AL+G ++
Sbjct: 7 SELTKEQREELMCVYSSLVLYDDGLDVTQDNILKLVKAAKGDMQPFTPMLFARALKGKDL 66
Query: 258 RDLITNIGSG 287
L++ +GSG
Sbjct: 67 GSLLSAVGSG 76
>UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3;
Eimeriorina|Rep: Acidic ribosomal protein P1 -
Cryptosporidium hominis
Length = 124
Score = 64.1 bits (149), Expect = 7e-09
Identities = 31/72 (43%), Positives = 43/72 (59%)
Frame = +3
Query: 69 LARSKLKMVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEG 248
++ ++L EL C Y+AL+L D V VT E I I+ AA V PY+PGLFA+AL
Sbjct: 4 VSMNELPQSQVQELICSYAALVLSDGGVPVTSENIKKIISAAGGSVEPYFPGLFAQALST 63
Query: 249 INVRDLITNIGS 284
NV D++ G+
Sbjct: 64 TNVSDIVAGCGA 75
>UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative;
n=1; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 64.1 bits (149), Expect = 7e-09
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = +3
Query: 192 AAVDVXPYWPGLFAKALEGINVRDLITNIGSGV 290
A VD+ PYWP LFAKALEGINV+DLITNIGSGV
Sbjct: 6 ANVDIEPYWPALFAKALEGINVKDLITNIGSGV 38
>UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 114
Score = 63.3 bits (147), Expect = 1e-08
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Frame = +3
Query: 90 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAV-DVXPYWPGLFAKALEGINVRDL 266
M + E A Y+ALIL DD +T EK+ +L AA + DV P W LFAKALEG +V+D+
Sbjct: 1 MPTDPERAVSYAALILADDATPITPEKLQVLLIAAGIEDVEPIWTTLFAKALEGKDVKDI 60
Query: 267 ITNIGS 284
+T + S
Sbjct: 61 LTEVAS 66
>UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 103
Score = 59.3 bits (137), Expect = 2e-07
Identities = 25/49 (51%), Positives = 36/49 (73%)
Frame = +3
Query: 105 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGI 251
+ C+YSA IL +D V V +KI+T +KAA ++V P+WPGLFAK+L +
Sbjct: 19 KFTCIYSAHILHNDKVMVMEDKINTPIKAAGINVEPFWPGLFAKSLNNV 67
>UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa;
n=5; Plasmodium|Rep: Acidic ribosomal protein
P1-hydromedusa - Plasmodium yoelii yoelii
Length = 119
Score = 57.6 bits (133), Expect = 6e-07
Identities = 27/70 (38%), Positives = 44/70 (62%)
Frame = +3
Query: 78 SKLKMVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINV 257
++L K EL C Y+ALIL ++ +++T E I ++K + V PY P LF KAL+G ++
Sbjct: 7 AELPECEKQELLCTYAALILHEEKMSITNENIVKLIKKSNNTVLPYLPMLFEKALKGKDI 66
Query: 258 RDLITNIGSG 287
L++N+ G
Sbjct: 67 EGLLSNLSVG 76
>UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P1-A -
Candida albicans (Yeast)
Length = 106
Score = 57.2 bits (132), Expect = 8e-07
Identities = 36/107 (33%), Positives = 48/107 (44%)
Frame = +3
Query: 105 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLITNIGS 284
E A Y+ALIL D +V +T EK+ ++ A V+V W LFAKALEG ++++ N +
Sbjct: 4 ESALSYAALILADAEVEITSEKLLALVTKANVEVEGIWADLFAKALEGKDLKEFFFNFSA 63
Query: 285 GVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 425
SDDDMGFGLFD
Sbjct: 64 A----PAAAAAGGAAGGGAAAEEAAEEEKEEEAKEESDDDMGFGLFD 106
>UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_44,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 122
Score = 55.2 bits (127), Expect = 3e-06
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Frame = +3
Query: 102 AELACVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLI-TNI 278
+E AC Y+ALIL +D+ + K++ I+KAA + V P W +F KAL+G V DL+ N
Sbjct: 17 SEAACTYAALILYEDNQEINAAKLAQIIKAANLRVEPIWTKVFEKALKGKKVGDLLHGNS 76
Query: 279 GS 284
GS
Sbjct: 77 GS 78
>UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia
lamblia ATCC 50803|Rep: GLP_480_102976_103332 - Giardia
lamblia ATCC 50803
Length = 118
Score = 54.8 bits (126), Expect = 4e-06
Identities = 27/60 (45%), Positives = 37/60 (61%)
Frame = +3
Query: 105 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLITNIGS 284
E ACV +A+IL D++ T + +I AA V V W LFA LEG NV++L+T +GS
Sbjct: 5 ETACVLAAIILADENQEPTAANLKSICDAAGVKVDSIWFTLFANYLEGKNVKELLTTLGS 64
>UniRef50_A2G448 Cluster: 60s Acidic ribosomal protein; n=2;
Trichomonas vaginalis G3|Rep: 60s Acidic ribosomal
protein - Trichomonas vaginalis G3
Length = 104
Score = 53.2 bits (122), Expect = 1e-05
Identities = 23/62 (37%), Positives = 38/62 (61%)
Frame = +3
Query: 102 AELACVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLITNIG 281
AELACVY+ALIL D + + + ++ ++ A+ + + +W L+A + NV DLI N+
Sbjct: 3 AELACVYAALILNDGEKEINADSLAKVVAASGLKLDQFWVNLYADYFKKANVADLIKNVS 62
Query: 282 SG 287
G
Sbjct: 63 LG 64
>UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putative;
n=7; Trypanosomatidae|Rep: 60S acidic ribosomal protein
P2, putative - Leishmania major
Length = 111
Score = 52.8 bits (121), Expect = 2e-05
Identities = 33/111 (29%), Positives = 47/111 (42%)
Frame = +3
Query: 93 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLIT 272
+S LAC Y+AL+L D + + E I+ +KAA V++ P P +FA+ LE +V L+
Sbjct: 1 MSAETLACTYAALMLSDAGLPTSAENIAAAVKAAGVEMRPTLPIIFARFLEKKSVETLMA 60
Query: 273 NIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 425
+ DDDMGFGLFD
Sbjct: 61 AAAAQAPTAASAPSPAAGAASAAAAGGKVEDKKKDEPEEEGDDDMGFGLFD 111
>UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P1 - Entamoeba histolytica HM-1:IMSS
Length = 106
Score = 50.0 bits (114), Expect = 1e-04
Identities = 24/60 (40%), Positives = 36/60 (60%)
Frame = +3
Query: 105 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLITNIGS 284
ELA +AL++ + +T E I+T+L A + V +WP + AKAL N+ DLI + GS
Sbjct: 9 ELAVALAALLIHEAGKEITAEHINTVLHHANIKVEGFWPIIMAKALTNANIEDLIMDAGS 68
>UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Trypanosoma cruzi
Length = 109
Score = 50.0 bits (114), Expect = 1e-04
Identities = 33/112 (29%), Positives = 46/112 (41%)
Frame = +3
Query: 90 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLI 269
M SK +LAC Y+ALIL D + + + KAA VDV FA L+ +++ D++
Sbjct: 1 MSSKQQLACTYAALILADSG-KTDMDSLLKVTKAAGVDVSKGMASAFASILKNVDINDVL 59
Query: 270 TNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 425
+ + G DDDMGFGLFD
Sbjct: 60 SKVSFG--GVAPAAGGATAAPAAAAAAAAPAAAAAKKEEEEEDDDMGFGLFD 109
>UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta;
n=21; Ascomycota|Rep: 60S acidic ribosomal protein
P1-beta - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 49.6 bits (113), Expect = 2e-04
Identities = 29/102 (28%), Positives = 46/102 (45%)
Frame = +3
Query: 120 YSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLITNIGSGVXXX 299
++A IL D + +T + + TI KAA +V W ++AKALEG +++++++ +
Sbjct: 8 FAAFILADAGLEITSDNLLTITKAAGANVDNVWADVYAKALEGKDLKEILSGFHNA---G 64
Query: 300 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 425
SDDDMGFGLFD
Sbjct: 65 PVAGAGAASGAAAAGGDAAAEEEKEEEAAEESDDDMGFGLFD 106
>UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion;
n=3; Chlorarachniophyceae|Rep: Ubiquitin/ribosomal
protein P1 fusion - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 221
Score = 48.0 bits (109), Expect = 5e-04
Identities = 20/50 (40%), Positives = 33/50 (66%)
Frame = +3
Query: 99 KAELACVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEG 248
K ELA +Y +IL + +T E I+ +L A+ ++V PYWP +FA+ ++G
Sbjct: 119 KQELAIMYCGMILNEVKADITEENINKLLSASKIEVAPYWPKMFAEIVKG 168
>UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4;
Leishmania|Rep: 60S acidic ribosomal protein P1 -
Leishmania peruviana
Length = 107
Score = 47.6 bits (108), Expect = 6e-04
Identities = 33/106 (31%), Positives = 44/106 (41%)
Frame = +3
Query: 108 LACVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLITNIGSG 287
LAC Y+AL+L D + + E I+ +KAA V V P P +FA+ LE +V L+ +
Sbjct: 6 LACTYAALMLSDAGLPTSAENIAAAVKAAGVSVRPTMPIIFARFLEKKSVEALM----AA 61
Query: 288 VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 425
DDDMGFGLFD
Sbjct: 62 AATQAPTATSAAAAPAAGEASGKAEEKKKEEPEEEGDDDMGFGLFD 107
>UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;
n=8; Eukaryota|Rep: 60S acidic ribosomal protein,
putative - Leishmania major
Length = 108
Score = 46.4 bits (105), Expect = 0.001
Identities = 33/111 (29%), Positives = 46/111 (41%)
Frame = +3
Query: 93 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLIT 272
++ A+LAC Y+ALIL + I + KAA V+V FA AL +NV +++
Sbjct: 1 MTTAQLACTYAALILSASG-KTDADSICAVTKAAGVEVSHGMAAAFANALAAVNVNEVLG 59
Query: 273 NIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 425
+I G +DDDMGFGLFD
Sbjct: 60 SISFG--GAAAGGAAAPAAAAAASGAAPAAAAAKEEPEEDADDDMGFGLFD 108
>UniRef50_A2DFD3 Cluster: 60S acidic ribosomal protein P1, putative;
n=1; Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P1, putative - Trichomonas vaginalis G3
Length = 44
Score = 39.5 bits (88), Expect = 0.17
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 105 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVXPYW 218
ELACVY+ALIL D D +T + + I+ A+ + +W
Sbjct: 4 ELACVYAALILHDGDKEITADALQKIIDASGLQTDKFW 41
>UniRef50_Q22XR4 Cluster: 60s Acidic ribosomal protein; n=1;
Tetrahymena thermophila SB210|Rep: 60s Acidic ribosomal
protein - Tetrahymena thermophila SB210
Length = 271
Score = 38.3 bits (85), Expect = 0.38
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 111 ACVYSALILVDDDVAVTGEKISTIL-KAAAVDVXPYWPGLFAKALEGINVRDLITNIGS 284
AC Y+ L+L DD A+T + I+ +L KA +V Y P L+ + + I N GS
Sbjct: 8 ACTYAVLLLSDDGQAITVDNINKVLTKAKVQNVEKYLPKLYVSNITPAVIASTIANGGS 66
>UniRef50_O28780 Cluster: 50S ribosomal protein L12P; n=26;
Archaea|Rep: 50S ribosomal protein L12P - Archaeoglobus
fulgidus
Length = 106
Score = 34.3 bits (75), Expect = 6.2
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +3
Query: 117 VYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLI 269
VY+AL+L +T + + +L+AA V+V ALEG+N+ + I
Sbjct: 4 VYAALLLHSAGKEITEDNVKAVLEAAGVEVDEARVKALVAALEGVNIDEAI 54
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 545,483,767
Number of Sequences: 1657284
Number of extensions: 7473011
Number of successful extensions: 17755
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 16852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17724
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 117912272470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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