Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_I22
         (1179 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    24   2.6  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    23   4.5  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   7.8  

>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -3

Query: 568 IFLLLAGMRPNKREPRRGTTRYSLYGLIQLKW 473
           +FL LA +   +++P     R S+  L + KW
Sbjct: 7   LFLCLATLALGQKDPHFAADRNSIVHLFEWKW 38


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = +2

Query: 410 KXPYYLECLSELKAEMSCILEPLKLDEAVKAIPGSTSPGF 529
           K P Y + L ELK    CI E L+L  +V  I    S  F
Sbjct: 34  KIPTYND-LQELKYTKRCIKETLRLFPSVPFISRYASEDF 72


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 751 CRAFAKCPKNSEDWQAIRL 807
           CR   +C KNS++  A RL
Sbjct: 51  CRDVVRCDKNSDNNGATRL 69


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,013
Number of Sequences: 336
Number of extensions: 3881
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 34434398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)