Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_I21
         (1151 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              27   0.41 
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    25   0.95 
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   6.7  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 26.6 bits (56), Expect = 0.41
 Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -2

Query: 985 GLGSNVTITPYSSXSLCKX*R-ATQRSSPACTPIEGPTWNSHCE 857
           G+G    ++P S+ ++C   R   +R  P C    G  + +HCE
Sbjct: 88  GIGKECELSPNSTIAVCVCMRKCPRRHRPVCAS-NGKIYANHCE 130


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 25.4 bits (53), Expect = 0.95
 Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
 Frame = -2

Query: 919 TQRSSPACTPIEGPTW--NSHCEGITSAF 839
           T    P   P    TW  N +C GITSA+
Sbjct: 95  TGNGGPLLAPYPDWTWAKNENCSGITSAY 123


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 382 GAKIAP*ISYLKLPKICLYGTSM 450
           GA +A  +  LK+P+ CL+G S+
Sbjct: 524 GAVVAGIVG-LKMPRYCLFGDSV 545


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 274,894
Number of Sequences: 438
Number of extensions: 5646
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 39042324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)