Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_I20
(1240 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.42
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.42
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.42
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.96
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.96
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 32 0.96
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.3
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.3
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.7
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 31 1.7
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 31 1.7
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 30 2.9
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 30 2.9
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 3.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 3.9
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 29 5.1
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 5.1
AF067219-1|AAC17036.1| 74|Caenorhabditis elegans Hypothetical ... 29 5.1
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 5.1
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 29 6.8
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 29 6.8
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 29 6.8
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 29 6.8
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 29 6.8
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 6.8
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 6.8
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 6.8
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 9.0
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 9.0
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 9.0
U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 9.0
M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein ( C.ele... 29 9.0
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 9.0
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 9.0
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.42
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +2
Query: 554 PXPXGXGGXVLGXPPXPPPKXPXXPGXXXXXXVSPPPRGXXXXPXKP 694
P P G + G PP PPP P PPP G P P
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 31.9 bits (69), Expect = 0.96
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = +2
Query: 554 PXPXGXGGXVLGXPPXPPPKXPXXPGXXXXXXVSPPPRGXXXXPXKP 694
P P G + G PP PPP PG PPP G P P
Sbjct: 745 PPPPGGLPPISGGPPPPPP----PPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -2
Query: 597 GGXPKTXPPXPXGXGVFXXGXNPPPPP 517
GG P PP P G F G PPPPP
Sbjct: 766 GGCPPPPPPPPPGG--FKGGPPPPPPP 790
Score = 31.1 bits (67), Expect = 1.7
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -2
Query: 597 GGXPKTXPPXPXGXGVFXXGXNPPPPPP 514
GG P PP P G G PPPPPP
Sbjct: 740 GGPPP--PPPPGGLPPISGGPPPPPPPP 765
Score = 29.5 bits (63), Expect = 5.1
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 526 GGVXPXXKNPPPPGXXGXGFGXPPXSPP 609
GG+ P PPPP G PP PP
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 28.7 bits (61), Expect = 9.0
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +1
Query: 517 GGGGGVXPXXKNPPPPGXXGXGFGXPPXSPP 609
GG + P PPPP G PP PP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPP 731
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.42
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +2
Query: 554 PXPXGXGGXVLGXPPXPPPKXPXXPGXXXXXXVSPPPRGXXXXPXKP 694
P P G + G PP PPP P PPP G P P
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 31.9 bits (69), Expect = 0.96
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = +2
Query: 554 PXPXGXGGXVLGXPPXPPPKXPXXPGXXXXXXVSPPPRGXXXXPXKP 694
P P G + G PP PPP PG PPP G P P
Sbjct: 745 PPPPGGLPPISGGPPPPPP----PPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -2
Query: 597 GGXPKTXPPXPXGXGVFXXGXNPPPPP 517
GG P PP P G F G PPPPP
Sbjct: 766 GGCPPPPPPPPPGG--FKGGPPPPPPP 790
Score = 31.1 bits (67), Expect = 1.7
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -2
Query: 597 GGXPKTXPPXPXGXGVFXXGXNPPPPPP 514
GG P PP P G G PPPPPP
Sbjct: 740 GGPPP--PPPPGGLPPISGGPPPPPPPP 765
Score = 29.5 bits (63), Expect = 5.1
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 526 GGVXPXXKNPPPPGXXGXGFGXPPXSPP 609
GG+ P PPPP G PP PP
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 28.7 bits (61), Expect = 9.0
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +1
Query: 517 GGGGGVXPXXKNPPPPGXXGXGFGXPPXSPP 609
GG + P PPPP G PP PP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPP 731
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.42
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +2
Query: 554 PXPXGXGGXVLGXPPXPPPKXPXXPGXXXXXXVSPPPRGXXXXPXKP 694
P P G + G PP PPP P PPP G P P
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Score = 31.9 bits (69), Expect = 0.96
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = +2
Query: 554 PXPXGXGGXVLGXPPXPPPKXPXXPGXXXXXXVSPPPRGXXXXPXKP 694
P P G + G PP PPP PG PPP G P P
Sbjct: 328 PPPPGGLPPISGGPPPPPP----PPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -2
Query: 597 GGXPKTXPPXPXGXGVFXXGXNPPPPP 517
GG P PP P G F G PPPPP
Sbjct: 349 GGCPPPPPPPPPGG--FKGGPPPPPPP 373
Score = 31.1 bits (67), Expect = 1.7
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -2
Query: 597 GGXPKTXPPXPXGXGVFXXGXNPPPPPP 514
GG P PP P G G PPPPPP
Sbjct: 323 GGPPP--PPPPGGLPPISGGPPPPPPPP 348
Score = 29.5 bits (63), Expect = 5.1
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 526 GGVXPXXKNPPPPGXXGXGFGXPPXSPP 609
GG+ P PPPP G PP PP
Sbjct: 332 GGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Score = 28.7 bits (61), Expect = 9.0
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +1
Query: 517 GGGGGVXPXXKNPPPPGXXGXGFGXPPXSPP 609
GG + P PPPP G PP PP
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPP 314
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.9 bits (69), Expect = 0.96
Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = -2
Query: 660 GGETXXXXXXPGXXGFXGGGXGGXPKTX--PPXPXGXGVFXXGXNPPPPPP 514
GG + G G+ GGG GG + G G PPPPPP
Sbjct: 257 GGSSGGGYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPP 307
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.9 bits (69), Expect = 0.96
Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = -2
Query: 660 GGETXXXXXXPGXXGFXGGGXGGXPKTX--PPXPXGXGVFXXGXNPPPPPP 514
GG + G G+ GGG GG + G G PPPPPP
Sbjct: 257 GGSSGGGYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPP 307
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 31.9 bits (69), Expect = 0.96
Identities = 20/66 (30%), Positives = 23/66 (34%)
Frame = +2
Query: 539 PXKKTPXPXGXGGXVLGXPPXPPPKXPXXPGXXXXXXVSPPPRGXXXXPXKPGETPXKXX 718
P P GG PP PPP+ P P SPPPR P P P +
Sbjct: 123 PPPPPPRKSRAGGS--SPPPPPPPRVPRTPPPR-----SPPPRRPPMTPPSPQRRPPRTP 175
Query: 719 XXKGPK 736
P+
Sbjct: 176 PSPEPR 181
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.5 bits (68), Expect = 1.3
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 588 PKTXPPXPXGXGVFXXGXNPPPPPP 514
P PP P G G PPPPPP
Sbjct: 631 PPPPPPPPMGLPAVGAGAPPPPPPP 655
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +2
Query: 539 PXKKTPXPXGXGGXVLGXPPXPPPKXPXXPGXXXXXXVSPPP 664
P P P G G PP PPP P G PP
Sbjct: 631 PPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLPP 672
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.5 bits (68), Expect = 1.3
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 588 PKTXPPXPXGXGVFXXGXNPPPPPP 514
P PP P G G PPPPPP
Sbjct: 457 PPPPPPPPMGLPAVGAGAPPPPPPP 481
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +2
Query: 539 PXKKTPXPXGXGGXVLGXPPXPPPKXPXXPGXXXXXXVSPPP 664
P P P G G PP PPP P G PP
Sbjct: 457 PPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLPP 498
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.1 bits (67), Expect = 1.7
Identities = 19/50 (38%), Positives = 19/50 (38%)
Frame = -2
Query: 663 GGGETXXXXXXPGXXGFXGGGXGGXPKTXPPXPXGXGVFXXGXNPPPPPP 514
GGG G G GGG GG G G G PPPPPP
Sbjct: 68 GGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGC-GGGCAPPPPPP 116
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 31.1 bits (67), Expect = 1.7
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -2
Query: 618 GFXGGGXGGXPKTXPPXPXGXGVFXXGXNPPPPPP 514
G+ G G G P P G G F PPPP P
Sbjct: 649 GWYGSGGGSSMPMPVPPPGGLGGFMPPPPPPPPMP 683
Score = 28.7 bits (61), Expect = 9.0
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +2
Query: 554 PXPXGXGGXVLGXPPXPPPKXPXXPGXXXXXXVSPPP 664
P P G GG + PP PPP P PPP
Sbjct: 664 PPPGGLGGFM--PPPPPPPPMPGDLSSLLAAAPPPPP 698
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 31.1 bits (67), Expect = 1.7
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -2
Query: 618 GFXGGGXGGXPKTXPPXPXGXGVFXXGXNPPPPPP 514
G+ G G G P P G G F PPPP P
Sbjct: 649 GWYGSGGGSSMPMPVPPPGGLGGFMPPPPPPPPMP 683
Score = 28.7 bits (61), Expect = 9.0
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +2
Query: 554 PXPXGXGGXVLGXPPXPPPKXPXXPGXXXXXXVSPPP 664
P P G GG + PP PPP P PPP
Sbjct: 664 PPPGGLGGFM--PPPPPPPPMPGDLSSLLAAAPPPPP 698
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 30.3 bits (65), Expect = 2.9
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = +1
Query: 517 GGGGGVXPXXK--NPPPPGXXGXGFGXPPXSPP 609
GGGGG P PPPP G PP PP
Sbjct: 27 GGGGGCAPAAPACAPPPPPMCGCAPPPPPPPPP 59
Score = 28.7 bits (61), Expect = 9.0
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Frame = -2
Query: 609 GGGXGGX----PKTXPPXPXGXGVFXXGXNPPPPP 517
GGG GG P PP P G PPPPP
Sbjct: 26 GGGGGGCAPAAPACAPPPPPMCGCAPPPPPPPPPP 60
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.3 bits (65), Expect = 2.9
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 553 PPPPGXXGXGFGXPPXSPP 609
PPP G GFG PP PP
Sbjct: 321 PPPQGAPQQGFGAPPQGPP 339
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 3.9
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = -2
Query: 630 PGXXGFXGGGXGGXPKTXPPXPXGXGVFXXGXNPPPPPP 514
P F G GG P PP G+ G PPPPPP
Sbjct: 320 PPPSRFGPPGMGGMPPPPPP-----GMRYPGGMPPPPPP 353
Score = 29.1 bits (62), Expect = 6.8
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 630 PGXXGFXGGGXGGXPKTXPPXPXGXGVFXXGXNPPPPPP 514
P G G G PP P G G PPPPPP
Sbjct: 301 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 339
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 3.9
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = -2
Query: 630 PGXXGFXGGGXGGXPKTXPPXPXGXGVFXXGXNPPPPPP 514
P F G GG P PP G+ G PPPPPP
Sbjct: 330 PPPSRFGPPGMGGMPPPPPP-----GMRYPGGMPPPPPP 363
Score = 29.1 bits (62), Expect = 6.8
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 630 PGXXGFXGGGXGGXPKTXPPXPXGXGVFXXGXNPPPPPP 514
P G G G PP P G G PPPPPP
Sbjct: 311 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 349
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 29.5 bits (63), Expect = 5.1
Identities = 19/55 (34%), Positives = 21/55 (38%)
Frame = -2
Query: 702 VSPGFXGXXFXPLGGGETXXXXXXPGXXGFXGGGXGGXPKTXPPXPXGXGVFXXG 538
V+PG G F P GG PG G G G G P P G G + G
Sbjct: 277 VAPGMPGA-FPPGQGGPGMPGSFPPGAPGPGGPGMPGSFAPGAPGPGGPGGYPSG 330
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 29.5 bits (63), Expect = 5.1
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +2
Query: 593 PPXPPPKXPXXPGXXXXXXVSPPPRGXXXXPXKPG 697
PP PPP P PPP G P PG
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPPG 805
>AF067219-1|AAC17036.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.15 protein.
Length = 74
Score = 29.5 bits (63), Expect = 5.1
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 5/37 (13%)
Frame = -2
Query: 609 GGGXGGXPKTXPPXPXGXGVFXXGXNP-----PPPPP 514
GGG GG PP G G G P PPPPP
Sbjct: 22 GGGAGGAGGCCPPAQPGCGNPCQGAGPQYAAAPPPPP 58
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 29.5 bits (63), Expect = 5.1
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +2
Query: 593 PPXPPPKXPXXPGXXXXXXVSPPPRGXXXXPXKPG 697
PP PPP P PPP G P PG
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPPG 805
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 29.1 bits (62), Expect = 6.8
Identities = 23/64 (35%), Positives = 24/64 (37%), Gaps = 3/64 (4%)
Frame = -2
Query: 696 PGFXGXX-FXPLGGGETXXXXXXPGXXGFXG--GGXGGXPKTXPPXPXGXGVFXXGXNPP 526
PGF G LGG PG G G G G + PP P G G F G P
Sbjct: 316 PGFKGDRGLDGLGG-----IPGLPGQKGEAGYPGRDGPKGNSGPPGPPGGGTFNDGAPGP 370
Query: 525 PPPP 514
P P
Sbjct: 371 PGLP 374
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 29.1 bits (62), Expect = 6.8
Identities = 23/64 (35%), Positives = 24/64 (37%), Gaps = 3/64 (4%)
Frame = -2
Query: 696 PGFXGXX-FXPLGGGETXXXXXXPGXXGFXG--GGXGGXPKTXPPXPXGXGVFXXGXNPP 526
PGF G LGG PG G G G G + PP P G G F G P
Sbjct: 315 PGFKGDRGLDGLGG-----IPGLPGQKGEAGYPGRDGPKGNSGPPGPPGGGTFNDGAPGP 369
Query: 525 PPPP 514
P P
Sbjct: 370 PGLP 373
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 29.1 bits (62), Expect = 6.8
Identities = 23/64 (35%), Positives = 24/64 (37%), Gaps = 3/64 (4%)
Frame = -2
Query: 696 PGFXGXX-FXPLGGGETXXXXXXPGXXGFXG--GGXGGXPKTXPPXPXGXGVFXXGXNPP 526
PGF G LGG PG G G G G + PP P G G F G P
Sbjct: 315 PGFKGDRGLDGLGG-----IPGLPGQKGEAGYPGRDGPKGNSGPPGPPGGGTFNDGAPGP 369
Query: 525 PPPP 514
P P
Sbjct: 370 PGLP 373
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 29.1 bits (62), Expect = 6.8
Identities = 23/64 (35%), Positives = 24/64 (37%), Gaps = 3/64 (4%)
Frame = -2
Query: 696 PGFXGXX-FXPLGGGETXXXXXXPGXXGFXG--GGXGGXPKTXPPXPXGXGVFXXGXNPP 526
PGF G LGG PG G G G G + PP P G G F G P
Sbjct: 316 PGFKGDRGLDGLGG-----IPGLPGQKGEAGYPGRDGPKGNSGPPGPPGGGTFNDGAPGP 370
Query: 525 PPPP 514
P P
Sbjct: 371 PGLP 374
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 29.1 bits (62), Expect = 6.8
Identities = 23/64 (35%), Positives = 24/64 (37%), Gaps = 3/64 (4%)
Frame = -2
Query: 696 PGFXGXX-FXPLGGGETXXXXXXPGXXGFXG--GGXGGXPKTXPPXPXGXGVFXXGXNPP 526
PGF G LGG PG G G G G + PP P G G F G P
Sbjct: 352 PGFKGDRGLDGLGG-----IPGLPGQKGEAGYPGRDGPKGNSGPPGPPGGGTFNDGAPGP 406
Query: 525 PPPP 514
P P
Sbjct: 407 PGLP 410
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.1 bits (62), Expect = 6.8
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = +1
Query: 526 GGVXPXXKN--PPPPGXXGXGFGXPPXSPP 609
GG+ P + PPPP G G PP PP
Sbjct: 223 GGIAPVNAHGAPPPPPLPPVGAGAPPPPPP 252
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.1 bits (62), Expect = 6.8
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = +1
Query: 526 GGVXPXXKN--PPPPGXXGXGFGXPPXSPP 609
GG+ P + PPPP G G PP PP
Sbjct: 209 GGIAPVNAHGAPPPPPLPPVGAGAPPPPPP 238
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.1 bits (62), Expect = 6.8
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = +1
Query: 526 GGVXPXXKN--PPPPGXXGXGFGXPPXSPP 609
GG+ P + PPPP G G PP PP
Sbjct: 209 GGIAPVNAHGAPPPPPLPPVGAGAPPPPPP 238
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.7 bits (61), Expect = 9.0
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 514 RGGGGGVXPXXKNPPPPGXXGXGFGXPPXSP 606
RGG G P PPP G G PP P
Sbjct: 784 RGGPGAPPPPGMRPPPGAPGGGGGMYPPLIP 814
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.7 bits (61), Expect = 9.0
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 514 RGGGGGVXPXXKNPPPPGXXGXGFGXPPXSP 606
RGG G P PPP G G PP P
Sbjct: 784 RGGPGAPPPPGMRPPPGAPGGGGGMYPPLIP 814
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.7 bits (61), Expect = 9.0
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 553 PPPPGXXGXGFGXPPXSPP 609
PPPP G G+ PP PP
Sbjct: 41 PPPPPPCGGGYEAPPPPPP 59
>U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 13 protein.
Length = 302
Score = 28.7 bits (61), Expect = 9.0
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = +2
Query: 554 PXPXGXGGXVLGXPPXPPPKXPXXPGXXXXXXVSPPPRGXXXXPXKPGE 700
P P G G G P P PK P P +P G P PGE
Sbjct: 233 PGPSGQPGND-GTPGQPGPKGPPGPDGKPGADGNPGQPGPVGPPGTPGE 280
>M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein (
C.elegans collagen (dpy-13) gene, complete cds. ).
Length = 302
Score = 28.7 bits (61), Expect = 9.0
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = +2
Query: 554 PXPXGXGGXVLGXPPXPPPKXPXXPGXXXXXXVSPPPRGXXXXPXKPGE 700
P P G G G P P PK P P +P G P PGE
Sbjct: 233 PGPSGQPGND-GTPGQPGPKGPPGPDGKPGADGNPGQPGPVGPPGTPGE 280
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.7 bits (61), Expect = 9.0
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 514 RGGGGGVXPXXKNPPPPGXXGXGFGXPPXSP 606
RGG G P PPP G G PP P
Sbjct: 784 RGGPGAPPPPGMRPPPGAPGGGGGMYPPLIP 814
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.7 bits (61), Expect = 9.0
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 514 RGGGGGVXPXXKNPPPPGXXGXGFGXPPXSP 606
RGG G P PPP G G PP P
Sbjct: 784 RGGPGAPPPPGMRPPPGAPGGGGGMYPPLIP 814
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.151 0.519
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,091,550
Number of Sequences: 27780
Number of extensions: 212902
Number of successful extensions: 1866
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1497
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3432936682
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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