Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_I19
(1223 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0592 + 4702327-4702416,4702510-4702568,4703900-4703994,470... 107 2e-23
12_01_0511 + 4049760-4049967,4050096-4050166,4051306-4051364,405... 60 3e-09
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 35 0.11
03_02_0222 + 6540095-6540099,6541215-6541339,6541440-6541766,654... 31 1.4
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 31 1.8
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 29 5.6
09_04_0112 - 14757947-14758972 29 7.4
07_01_0080 + 587674-588510 29 7.4
02_05_0686 - 30900748-30902167,30903442-30904742 29 7.4
01_03_0005 + 11568545-11569119,11569179-11569191 29 7.4
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 9.8
07_03_1136 + 24218601-24218734,24218769-24219906 29 9.8
03_01_0092 - 731069-731434,731569-733080 29 9.8
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 29 9.8
>11_01_0592 +
4702327-4702416,4702510-4702568,4703900-4703994,
4704348-4704352
Length = 82
Score = 107 bits (256), Expect = 2e-23
Identities = 55/81 (67%), Positives = 58/81 (71%), Gaps = 18/81 (22%)
Frame = +3
Query: 273 MIIPVRCFTCGKV------------------IGNKWEAYLGLLQADYTEGDALDVLGLKR 398
MIIPVRCFTCGKV IGNKW+ YL LLQADYTEGDALD LGL R
Sbjct: 1 MIIPVRCFTCGKVSLVSPSHASRLGDGRVLVIGNKWDLYLDLLQADYTEGDALDALGLVR 60
Query: 399 YCCRRMLLGHVDLIEKLLNYS 461
YCCRRML+ HVDLIEKLLNY+
Sbjct: 61 YCCRRMLMTHVDLIEKLLNYN 81
>12_01_0511 +
4049760-4049967,4050096-4050166,4051306-4051364,
4052424-4052549,4052943-4053037,4053263-4053312
Length = 202
Score = 60.1 bits (139), Expect = 3e-09
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +3
Query: 369 DALDVLGLKRYCCRRMLLGHVDLIEKLLNYS 461
DALD LGL RYCCRRML+ HVDLIEKLLNY+
Sbjct: 156 DALDALGLVRYCCRRMLMTHVDLIEKLLNYN 186
Score = 46.0 bits (104), Expect = 6e-05
Identities = 21/32 (65%), Positives = 24/32 (75%)
Frame = +3
Query: 306 KVIGNKWEAYLGLLQADYTEGDALDVLGLKRY 401
KVIGNKW+ YL LLQADYTEG + G +RY
Sbjct: 93 KVIGNKWDLYLDLLQADYTEGGSGRQRGEERY 124
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 35.1 bits (77), Expect = 0.11
Identities = 33/126 (26%), Positives = 33/126 (26%), Gaps = 4/126 (3%)
Frame = +3
Query: 657 PPXGGVXGPXXEKXPXGX-GXPPPXKXGKKXXXWGXXGXXXXXGX---PXXPXKNXXXXX 824
PP G P P G G PPP G G P P
Sbjct: 1101 PPSIGAGAPPPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGP 1160
Query: 825 XXXXFFXXAXGGGXGGXXXXXXXPPPPXGXGGXXFGGPXXXPXXXXPXXPXXXXXGXXXX 1004
GG PPPP G GGP P P P G
Sbjct: 1161 PAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGG---P 1217
Query: 1005 PPPXGG 1022
PPP GG
Sbjct: 1218 PPPPGG 1223
>03_02_0222 +
6540095-6540099,6541215-6541339,6541440-6541766,
6541815-6543215,6543268-6543357,6543800-6544515,
6545549-6545707,6545877-6546186,6546794-6546861,
6547354-6547896
Length = 1247
Score = 31.5 bits (68), Expect = 1.4
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Frame = +3
Query: 327 EAYLGLLQADYTEGDALDVLGLKRYCCRR-MLLGHV-DLIEKLLN 455
+AY+GLL A + GD VL ++ YC RR LLG + DL +++++
Sbjct: 841 DAYIGLLTAKFERGDEHGVL-IQEYCDRRDELLGSLYDLAKQIVD 884
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 934 PPKXXPPXPXGGGGXXXXXXXPPXPPP 854
PP+ PP GGGG PP PP
Sbjct: 14 PPQHPPPPQAGGGGGGEFYRGPPPQPP 40
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 29.5 bits (63), Expect = 5.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 931 PKXXPPXPXGGGGXXXXXXXPPXPPP 854
P PP P GGG PP PPP
Sbjct: 24 PCPLPPIPSCGGGGGGAGPTPPPPPP 49
>09_04_0112 - 14757947-14758972
Length = 341
Score = 29.1 bits (62), Expect = 7.4
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 743 FFPXLXGGGXPXPPRXFFXXGPPXPPXRGXPXP 645
F L G P PP PP PP RG P
Sbjct: 88 FHRRLPEGSPPPPPPPALLPAPPMPPHRGEETP 120
>07_01_0080 + 587674-588510
Length = 278
Score = 29.1 bits (62), Expect = 7.4
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -2
Query: 949 GXXXGPPKXXPPXPXGGGGXXXXXXXPPXPPP 854
G PP PP P G PP PPP
Sbjct: 86 GMFRRPPPPPPPPPSSGSPPPPPPPPPPPPPP 117
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.1 bits (62), Expect = 7.4
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 642 PGXGXPPXGGVXGPXXEKXPXGXGXPPPXKXGKK 743
P G PP GP P G PPP G K
Sbjct: 340 PPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGK 373
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +3
Query: 894 PPPPXGXGGXXFGGPXXXPXXXXPXXPXXXXXGXXXXPPPXGGXXXXPXXXG 1049
PPPP G P P P P G PPP GG P G
Sbjct: 344 PPPPPPAKGPPPPPPPKGP-SPPPPPPPGGKKGGPPPPPPKGGASRPPAAPG 394
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 29.1 bits (62), Expect = 7.4
Identities = 15/52 (28%), Positives = 16/52 (30%)
Frame = +2
Query: 770 PXXXXXPXXPXXKPXXXPXXXXFFXXGPGGGXGXXXXXXXXPPPPXGXXGXG 925
P P P P + G GGG G PPPP G G
Sbjct: 52 PSYYPPPPPPVVTPTPQCPPPPSYPSGGGGGGGGGTVMYTSPPPPYSGGGGG 103
Score = 28.7 bits (61), Expect = 9.8
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = +3
Query: 855 GGGXGGXXXXXXXPPPP--XGXGGXXFGG 935
GGG GG PPPP G GG GG
Sbjct: 80 GGGGGGGTVMYTSPPPPYSGGGGGSSTGG 108
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 934 PPKXXPPXPXGGGGXXXXXXXPPXPPP 854
PP PP P G PP PPP
Sbjct: 544 PPPPPPPPPPPSGNKPAFSPPPPPPPP 570
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 934 PPKXXPPXPXGGGGXXXXXXXPPXPPP 854
PP PP P G PP PPP
Sbjct: 545 PPPPPPPPPPSGNKPAFSPPPPPPPPP 571
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 28.7 bits (61), Expect = 9.8
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -2
Query: 1021 PPXGGGXXXXPXXXXXGXXGXXXXGXXXGPPKXXPPXPXGGGG 893
PP GGG P G G GPP PP GGGG
Sbjct: 91 PPGGGGA---PGPLGGGGARPPGGGGGGGPPS-LPPGAGGGGG 129
>03_01_0092 - 731069-731434,731569-733080
Length = 625
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 849 AXGGGXGGXXXXXXXPPPPXGXGGXXF 929
A GGG GG PPPP G F
Sbjct: 594 ASGGGGGGAPTTPAGPPPPAATSGTSF 620
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 28.7 bits (61), Expect = 9.8
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +1
Query: 667 GGXGGPXXKKXLGGXGXPPPXRXGKXGXXGEXGG 768
GG GG GG G PPP G G G GG
Sbjct: 380 GGYGGRPMPGG-GGPGAPPPYHGGGGGGGGGGGG 412
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,074,232
Number of Sequences: 37544
Number of extensions: 635713
Number of successful extensions: 1617
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1395
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3759607596
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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