Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_I19
         (1223 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    29   0.36 
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    25   5.9  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    25   5.9  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   7.9  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    24   7.9  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 28.7 bits (61), Expect = 0.36
 Identities = 13/34 (38%), Positives = 14/34 (41%)
 Frame = +2

Query: 848 GPGGGXGXXXXXXXXPPPPXGXXGXGFWGXXPXP 949
           G GGG G         PP  G  G G +G  P P
Sbjct: 126 GGGGGYGHQGSMMRAMPPELGMYGGGCYGSPPVP 159


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 24.6 bits (51), Expect = 5.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 288 RCFTCGKVIGNKWEAY 335
           RC +CGK + N+W  +
Sbjct: 528 RCRSCGKEVTNRWHHF 543


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 24.6 bits (51), Expect = 5.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 288 RCFTCGKVIGNKWEAY 335
           RC +CGK + N+W  +
Sbjct: 504 RCRSCGKEVTNRWHHF 519


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 7.9
 Identities = 13/39 (33%), Positives = 13/39 (33%), Gaps = 1/39 (2%)
 Frame = +3

Query: 894  PPPPXGXGGXXF-GGPXXXPXXXXPXXPXXXXXGXXXXP 1007
            PPPP G       GGP   P    P  P     G    P
Sbjct: 587  PPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPP 625


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 24.2 bits (50), Expect = 7.9
 Identities = 13/41 (31%), Positives = 15/41 (36%)
 Frame = -1

Query: 767 PPXSPXXPFFPXLXGGGXPXPPRXFFXXGPPXPPXRGXPXP 645
           PP +   P  P +  G    PP      GP  PP  G   P
Sbjct: 79  PPPTMNMPPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPP 119


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 953,260
Number of Sequences: 2352
Number of extensions: 17854
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 139382727
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)