Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_I18
         (1238 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ...   109   1e-22
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi...    53   2e-05
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ...    52   4e-05
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ...    44   0.008
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ...    41   0.076
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0...    35   5.0  

>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
           root|Rep: Putative uncharacterized protein - Salmonella
           typhimurium
          Length = 127

 Score =  109 bits (263), Expect = 1e-22
 Identities = 59/113 (52%), Positives = 63/113 (55%)
 Frame = +2

Query: 551 KGQEPXKGQNCWRXXIGSAPXTSIXQIDAQXTGGXXXQDYKXTXRFPLXAPXXXXLXRXX 730
           K Q     Q   R  IGSAP TSI +IDAQ  GG   QDYK T RFPL AP    L R  
Sbjct: 3   KKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPC 62

Query: 731 RLPXTXPPXSXXETXRFLIGXXCRYLTXGXKSXAPXWAGCTNPPXSPTXAPXP 889
           RLP T PP S  E  RFLI      ++   +S AP WA CTNPP SPT AP P
Sbjct: 63  RLPDTCPPFSLREAWRFLIAHAVG-ISVRCRSFAPSWAVCTNPPFSPTAAPYP 114


>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
           organisms|Rep: Predicted protein - Nematostella
           vectensis
          Length = 97

 Score = 52.8 bits (121), Expect = 2e-05
 Identities = 26/45 (57%), Positives = 29/45 (64%)
 Frame = +2

Query: 569 KGQNCWRXXIGSAPXTSIXQIDAQXTGGXXXQDYKXTXRFPLXAP 703
           +G    R  IGSAP TSI + DAQ +GG   QDYK T RFPL AP
Sbjct: 45  RGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAP 89


>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli
          Length = 147

 Score = 51.6 bits (118), Expect = 4e-05
 Identities = 27/51 (52%), Positives = 29/51 (56%)
 Frame = +2

Query: 587 RXXIGSAPXTSIXQIDAQXTGGXXXQDYKXTXRFPLXAPXXXXLXRXXRLP 739
           R  IGSAP TSI + DAQ +GG   QDYK   RFPL AP    L     LP
Sbjct: 83  RFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133


>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
           root|Rep: Putative uncharacterized protein - Escherichia
           coli
          Length = 61

 Score = 44.0 bits (99), Expect = 0.008
 Identities = 26/54 (48%), Positives = 28/54 (51%)
 Frame = -3

Query: 621 MLVXGAEPMXXRQQFWPXYGSWPFGGLLXXXXXXGYPLXLWITVFPPLSXVIPL 460
           MLV GAEPM  R + W      P    L       YPL LWITV PPLS + PL
Sbjct: 1   MLVRGAEPMEKRLRCWLL----PVLCFLLTCSFRLYPLILWITVLPPLSELTPL 50


>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
            cellular organisms|Rep: Uncharacterized 9.4 kDa protein -
            Escherichia coli
          Length = 84

 Score = 40.7 bits (91), Expect = 0.076
 Identities = 22/59 (37%), Positives = 23/59 (38%)
 Frame = +1

Query: 850  HEPPXQPDRXPXSG*XSXXTPTRXRHXXXPLETXXGXXTXKTRYXXRGXXXLKWGPTNG 1026
            HEPP QPDR   SG          RH   PL    G    + RY       LKW P  G
Sbjct: 2    HEPPVQPDRCALSG-NYRLESNPVRHDLSPLAAATGNRISRARYVGGATEFLKWWPNYG 59


>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
           CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
           BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
           Citrobacter koseri ATCC BAA-895
          Length = 125

 Score = 34.7 bits (76), Expect = 5.0
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = +2

Query: 821 KSXAPXWAGCTNPPXSPTXAPXP 889
           +S AP WA   NPP SPT AP P
Sbjct: 82  RSFAPSWAVSKNPPFSPTAAPYP 104


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,078,240
Number of Sequences: 1657284
Number of extensions: 6857365
Number of successful extensions: 10342
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10326
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 125125458531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)