Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_I16
(1219 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 233 5e-60
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 199 1e-49
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 166 9e-40
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 157 4e-37
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 151 3e-35
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 146 1e-33
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 142 2e-32
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 138 2e-31
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 120 6e-26
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 118 3e-25
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 108 2e-22
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 107 8e-22
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 106 1e-21
UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma j... 105 2e-21
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 102 2e-20
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 100 9e-20
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 97 1e-18
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 96 2e-18
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 96 2e-18
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 95 3e-18
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 94 6e-18
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 94 6e-18
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 94 8e-18
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 94 8e-18
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 93 1e-17
UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase... 93 2e-17
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 93 2e-17
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 92 2e-17
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 92 3e-17
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 91 4e-17
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 90 1e-16
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 89 2e-16
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 89 3e-16
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 89 3e-16
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 89 3e-16
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 88 4e-16
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 87 7e-16
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 87 1e-15
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 86 2e-15
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 86 2e-15
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 85 3e-15
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 85 3e-15
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 85 4e-15
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 85 4e-15
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 85 4e-15
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 85 4e-15
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 85 4e-15
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 85 5e-15
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 85 5e-15
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 84 6e-15
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 84 8e-15
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 84 8e-15
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 84 8e-15
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 83 1e-14
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 83 1e-14
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 83 1e-14
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 82 2e-14
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 82 3e-14
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 82 3e-14
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 81 4e-14
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 81 4e-14
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 81 4e-14
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 81 6e-14
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 81 6e-14
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 81 8e-14
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 81 8e-14
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 81 8e-14
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 81 8e-14
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 81 8e-14
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 80 1e-13
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 80 1e-13
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 80 1e-13
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 80 1e-13
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 80 1e-13
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 80 1e-13
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 80 1e-13
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 80 1e-13
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 80 1e-13
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 80 1e-13
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 79 2e-13
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 79 2e-13
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 79 2e-13
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 79 2e-13
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 79 2e-13
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 79 2e-13
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 79 2e-13
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 79 2e-13
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 79 3e-13
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 79 3e-13
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 79 3e-13
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 79 3e-13
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 79 3e-13
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 78 4e-13
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 78 4e-13
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 78 4e-13
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 78 4e-13
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 78 4e-13
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 78 5e-13
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 78 5e-13
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 78 5e-13
UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2; P... 78 5e-13
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 77 7e-13
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 77 7e-13
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 77 7e-13
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 77 7e-13
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 77 7e-13
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 77 9e-13
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 77 9e-13
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 77 1e-12
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 77 1e-12
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 77 1e-12
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 76 2e-12
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 76 2e-12
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 76 2e-12
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 76 2e-12
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 76 2e-12
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 76 2e-12
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 76 2e-12
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 76 2e-12
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 75 3e-12
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 75 3e-12
UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase... 75 3e-12
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 75 3e-12
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 75 4e-12
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 75 4e-12
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 75 5e-12
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 75 5e-12
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 75 5e-12
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 74 7e-12
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 74 7e-12
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 74 7e-12
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 74 7e-12
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 74 9e-12
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 74 9e-12
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 74 9e-12
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 73 1e-11
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 73 1e-11
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 73 1e-11
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 73 1e-11
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 73 2e-11
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 73 2e-11
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 73 2e-11
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 73 2e-11
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 73 2e-11
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 73 2e-11
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 73 2e-11
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 73 2e-11
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 73 2e-11
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 73 2e-11
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 73 2e-11
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 73 2e-11
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 73 2e-11
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 73 2e-11
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 73 2e-11
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 72 3e-11
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 72 3e-11
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 72 3e-11
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 72 3e-11
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 72 3e-11
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 72 3e-11
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 72 3e-11
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 72 3e-11
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 72 3e-11
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 72 3e-11
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 72 3e-11
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 71 5e-11
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 71 5e-11
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 71 5e-11
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 71 5e-11
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 71 5e-11
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 71 6e-11
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 71 6e-11
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 71 6e-11
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 71 6e-11
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 71 8e-11
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 71 8e-11
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 71 8e-11
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 71 8e-11
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 71 8e-11
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 71 8e-11
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 71 8e-11
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 71 8e-11
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 70 1e-10
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 70 1e-10
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 70 1e-10
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 70 1e-10
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 70 1e-10
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 70 1e-10
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 70 1e-10
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 70 1e-10
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 70 1e-10
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 69 2e-10
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 69 2e-10
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 69 2e-10
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 69 2e-10
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 69 2e-10
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 69 2e-10
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 69 2e-10
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 69 2e-10
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 69 2e-10
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 69 2e-10
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 69 2e-10
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 69 2e-10
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 69 2e-10
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 69 2e-10
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 69 3e-10
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 69 3e-10
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 69 3e-10
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 69 3e-10
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 68 4e-10
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 68 4e-10
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 68 4e-10
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 68 4e-10
UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1; Ent... 68 6e-10
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 68 6e-10
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 68 6e-10
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 68 6e-10
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 68 6e-10
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 67 8e-10
UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: R... 67 8e-10
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 67 8e-10
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 67 8e-10
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 67 8e-10
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 67 8e-10
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 67 8e-10
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 67 8e-10
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 67 8e-10
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 67 8e-10
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 67 1e-09
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 67 1e-09
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 67 1e-09
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 67 1e-09
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 66 1e-09
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 66 1e-09
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 66 1e-09
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 66 1e-09
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 66 1e-09
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 66 2e-09
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 66 2e-09
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 66 2e-09
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 66 2e-09
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 66 2e-09
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 66 2e-09
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 66 2e-09
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 66 2e-09
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 66 2e-09
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 66 2e-09
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 66 2e-09
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 66 2e-09
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 65 3e-09
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 65 3e-09
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 65 3e-09
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 65 3e-09
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 65 3e-09
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 65 3e-09
UniRef50_A7ETZ1 Cluster: Putative uncharacterized protein; n=1; ... 65 3e-09
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 65 3e-09
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 65 3e-09
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 65 4e-09
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 65 4e-09
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 65 4e-09
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 65 4e-09
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 65 4e-09
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 65 4e-09
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 65 4e-09
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 65 4e-09
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 64 5e-09
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 64 5e-09
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 64 5e-09
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 64 5e-09
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 64 5e-09
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 64 5e-09
UniRef50_Q7R0K7 Cluster: GLP_154_39979_41331; n=1; Giardia lambl... 64 5e-09
UniRef50_A2DEZ7 Cluster: DEAD/DEAH box helicase family protein; ... 64 5e-09
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 64 5e-09
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 64 5e-09
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 64 7e-09
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 64 7e-09
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 64 7e-09
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 64 7e-09
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 64 7e-09
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 64 7e-09
UniRef50_Q6BZR4 Cluster: ATP-dependent RNA helicase DBP9; n=1; Y... 64 7e-09
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 64 9e-09
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 64 9e-09
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 64 9e-09
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 64 9e-09
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 64 9e-09
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 64 9e-09
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 64 9e-09
UniRef50_Q9C8S9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 64 9e-09
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 64 9e-09
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 64 9e-09
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 64 9e-09
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 63 1e-08
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 63 1e-08
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 63 1e-08
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 63 1e-08
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 63 1e-08
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 63 1e-08
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 63 1e-08
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 63 2e-08
UniRef50_A2YDM1 Cluster: Putative uncharacterized protein; n=2; ... 63 2e-08
UniRef50_Q55CP6 Cluster: Putative uncharacterized protein; n=1; ... 63 2e-08
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 63 2e-08
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 63 2e-08
UniRef50_Q8SSG7 Cluster: PUTATIVE ATP-DEPENDENT RNA HELICASE; n=... 63 2e-08
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 63 2e-08
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 63 2e-08
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 63 2e-08
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 62 2e-08
UniRef50_A6SDG8 Cluster: Putative uncharacterized protein; n=1; ... 62 2e-08
UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3; ... 62 2e-08
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 62 3e-08
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 62 3e-08
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 62 3e-08
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 62 3e-08
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 62 3e-08
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 62 3e-08
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 62 3e-08
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 62 3e-08
UniRef50_UPI0000D55FA1 Cluster: PREDICTED: similar to CG3561-PA;... 62 4e-08
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 62 4e-08
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 62 4e-08
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 62 4e-08
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 62 4e-08
UniRef50_Q2GWX0 Cluster: Putative uncharacterized protein; n=4; ... 62 4e-08
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 62 4e-08
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 61 5e-08
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 61 5e-08
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 61 5e-08
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 61 5e-08
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 61 5e-08
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 61 5e-08
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas... 61 5e-08
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 61 5e-08
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 61 7e-08
UniRef50_A7QKJ8 Cluster: Chromosome chr2 scaffold_112, whole gen... 61 7e-08
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 61 7e-08
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 61 7e-08
UniRef50_O13622 Cluster: ATP-dependent RNA helicase mss116, mito... 61 7e-08
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 60 9e-08
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 60 9e-08
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 60 9e-08
UniRef50_A2E773 Cluster: Helicase conserved C-terminal domain co... 60 9e-08
UniRef50_Q9FLB0 Cluster: DEAD-box ATP-dependent RNA helicase 18;... 60 9e-08
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 60 1e-07
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 60 1e-07
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 60 1e-07
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 60 1e-07
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 60 1e-07
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 60 1e-07
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 60 1e-07
UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2; ... 60 1e-07
UniRef50_Q4N7J8 Cluster: DEAD box RNA helicase, putative; n=2; T... 60 1e-07
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 60 1e-07
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 60 1e-07
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 60 1e-07
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 60 2e-07
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 60 2e-07
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 60 2e-07
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 60 2e-07
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 60 2e-07
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 60 2e-07
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 60 2e-07
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 60 2e-07
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 59 2e-07
UniRef50_Q6YQC2 Cluster: Superfamily II DNA and RNA helicase; n=... 59 2e-07
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 59 2e-07
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 59 2e-07
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 59 2e-07
UniRef50_Q1WSN6 Cluster: ATP-dependent RNA helicase; n=1; Lactob... 59 2e-07
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 59 2e-07
UniRef50_A7NW17 Cluster: Chromosome chr5 scaffold_2, whole genom... 59 2e-07
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 59 2e-07
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 59 2e-07
UniRef50_Q4Q552 Cluster: ATP-dependent RNA helicase, putative; n... 59 2e-07
UniRef50_A0DK92 Cluster: Chromosome undetermined scaffold_54, wh... 59 2e-07
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 59 2e-07
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 59 2e-07
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 59 2e-07
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 59 2e-07
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 59 3e-07
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 59 3e-07
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 59 3e-07
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 59 3e-07
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 59 3e-07
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 59 3e-07
UniRef50_A2SJY2 Cluster: Putative ATP-dependent RNA helicase; n=... 59 3e-07
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 59 3e-07
UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2; Lactob... 58 3e-07
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 58 3e-07
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 58 3e-07
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 58 3e-07
UniRef50_Q1LSH5 Cluster: DEAD/DEAH box helicase-like protein pre... 58 5e-07
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 58 5e-07
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 58 5e-07
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 58 5e-07
UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;... 58 5e-07
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 58 5e-07
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 58 6e-07
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 58 6e-07
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 58 6e-07
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 58 6e-07
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 58 6e-07
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 58 6e-07
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 58 6e-07
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 58 6e-07
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 58 6e-07
UniRef50_Q9FVV4 Cluster: Putative DEAD-box ATP-dependent RNA hel... 58 6e-07
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 58 6e-07
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 58 6e-07
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 57 8e-07
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 57 8e-07
UniRef50_Q03GJ4 Cluster: Superfamily II DNA and RNA helicase; n=... 57 8e-07
UniRef50_Q7QV50 Cluster: GLP_435_34658_36088; n=1; Giardia lambl... 57 8e-07
UniRef50_Q8X0H1 Cluster: Related to RNA helicase MSS116; n=2; Ne... 57 8e-07
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 57 8e-07
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 57 8e-07
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 57 8e-07
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 57 8e-07
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 57 1e-06
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 57 1e-06
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 57 1e-06
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 57 1e-06
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 57 1e-06
UniRef50_A7ARY5 Cluster: DEAD/DEAH box helicase protein family; ... 57 1e-06
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 57 1e-06
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 57 1e-06
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 57 1e-06
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 57 1e-06
UniRef50_Q06218 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 57 1e-06
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 56 1e-06
UniRef50_Q97PV7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 56 1e-06
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 56 1e-06
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 56 1e-06
UniRef50_Q5BXN2 Cluster: SJCHGC07723 protein; n=1; Schistosoma j... 56 1e-06
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 56 1e-06
UniRef50_A5K917 Cluster: DEAD/DEAH box helicase, putative; n=4; ... 56 1e-06
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 56 2e-06
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 56 2e-06
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 56 2e-06
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 56 2e-06
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 56 2e-06
UniRef50_A2E9Y0 Cluster: DEAD/DEAH box helicase family protein; ... 56 2e-06
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 56 2e-06
UniRef50_Q4P0P9 Cluster: Putative uncharacterized protein; n=1; ... 56 2e-06
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 56 2e-06
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 56 2e-06
UniRef50_Q015I7 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 56 2e-06
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 56 2e-06
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 56 2e-06
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 56 2e-06
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 56 2e-06
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 56 2e-06
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 56 2e-06
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 56 2e-06
UniRef50_Q9FFT9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 56 2e-06
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 55 3e-06
UniRef50_UPI0000498707 Cluster: DEAD/DEAH box helicase; n=1; Ent... 55 3e-06
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 55 3e-06
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 55 3e-06
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 55 3e-06
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 55 3e-06
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 55 3e-06
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 55 3e-06
UniRef50_Q9UTP9 Cluster: ATP-dependent RNA helicase dbp4; n=1; S... 55 3e-06
UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1; E... 55 3e-06
UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1; F... 55 3e-06
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 55 3e-06
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 55 4e-06
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 55 4e-06
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 55 4e-06
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 55 4e-06
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 55 4e-06
UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-... 55 4e-06
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 55 4e-06
UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. ... 55 4e-06
UniRef50_Q4QFH1 Cluster: ATP-dependent RNA helicase, putative; n... 55 4e-06
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 55 4e-06
UniRef50_A7AU89 Cluster: DEAD/DEAH box helicase family protein; ... 55 4e-06
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 55 4e-06
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 55 4e-06
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 55 4e-06
UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1; S... 55 4e-06
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 55 4e-06
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 54 6e-06
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 54 6e-06
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 54 6e-06
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume... 54 6e-06
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 54 6e-06
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 54 6e-06
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 54 6e-06
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w... 54 6e-06
UniRef50_Q1E273 Cluster: Putative uncharacterized protein; n=2; ... 54 6e-06
UniRef50_Q8NHQ9 Cluster: ATP-dependent RNA helicase DDX55; n=86;... 54 6e-06
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 54 6e-06
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 54 6e-06
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 54 7e-06
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 54 7e-06
>UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111;
Eumetazoa|Rep: ATP-dependent RNA helicase DDX25 - Homo
sapiens (Human)
Length = 483
Score = 233 bits (571), Expect = 5e-60
Identities = 117/222 (52%), Positives = 145/222 (65%)
Frame = +1
Query: 256 SLXMXXXRQGLVASQLALAIQRXAPXSPLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQ 435
SL Q LV S + + + P SPLYSVKTF L L LLKG+ A GF PSKIQ
Sbjct: 65 SLLNKLIHQSLVESSHRVEVLQKDPSSPLYSVKTFEELRLKEELLKGIYAMGFNRPSKIQ 124
Query: 436 XXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTG 615
Q AQSQSGTGKTAAFVLA LSRV++ + +PQ LCL+PTYELA+QTG
Sbjct: 125 EMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALELFPQCLCLAPTYELALQTG 184
Query: 616 EVAAKMAKFCPEIKLKYAVRGEELPRGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVF 795
V +M KFC ++++ YA+RG +PRG+ IT I+IGTPG + DW K + D+ KI+VF
Sbjct: 185 RVVEQMGKFCVDVQVMYAIRGNRIPRGTDITKQIIIGTPGTVLDWCFKLKLIDLTKIRVF 244
Query: 796 VLDEADVMINRQGHQXQCIRIHKCLXSTCQMMFFSATYGTAV 921
VLDEADVMI+ QG IRI + L S CQM+ FSAT+ +V
Sbjct: 245 VLDEADVMIDTQGFSDHSIRIQRALPSECQMLLFSATFEDSV 286
Score = 37.5 bits (83), Expect = 0.70
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Frame = +3
Query: 819 DQSTRASRXMH*NS*MLTINMSDDVFLCNIWYCSHAIAEIMVSNPIIIRLLREEESLDNI 998
D S R R + ML + + F ++W+ AE ++ +P +I+L +EE +L+NI
Sbjct: 260 DHSIRIQRALPSECQMLLFSAT---FEDSVWH----FAERIIPDPNVIKLRKEELTLNNI 312
Query: 999 KQYYVSAKCR-XKYXAXVXLW-CIKMGXQ-YFCXXKK 1100
+QYYV + R KY A ++ I +G FC ++
Sbjct: 313 RQYYVLCEHRKDKYQALCNIYGSITIGQAIIFCQTRR 349
>UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 457
Score = 199 bits (486), Expect = 1e-49
Identities = 100/203 (49%), Positives = 129/203 (63%)
Frame = +1
Query: 256 SLXMXXXRQGLVASQLALAIQRXAPXSPLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQ 435
SL R LV S + + + P SPLYSVK+F L L P LLKGV GF PS+IQ
Sbjct: 6 SLLNKLIRHSLVHSSNQVEVLQRDPSSPLYSVKSFEELRLKPELLKGVYQMGFNRPSRIQ 65
Query: 436 XXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTG 615
Q AQSQSGTGKTAAF LA L V+ +PQ LC++PTYELA+Q G
Sbjct: 66 ENALPLMMAQPAQNLIAQSQSGTGKTAAFCLAMLGIVNPADKWPQCLCIAPTYELALQIG 125
Query: 616 EVAAKMAKFCPEIKLKYAVRGEELPRGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVF 795
+V +M +FC +++L YAVRG + RG+K+ + I++GTPG ++DW K + D KI +F
Sbjct: 126 QVLEQMGRFCADVRLVYAVRGNRIVRGTKVQEQIVVGTPGTVYDWCAKQKVLDPKKITMF 185
Query: 796 VLDEADVMINRQGHQXQCIRIHK 864
VLDEADVMI+ QGH+ Q IRI +
Sbjct: 186 VLDEADVMISMQGHRDQSIRIQR 208
Score = 39.1 bits (87), Expect = 0.23
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Frame = +3
Query: 930 AEIMVSNPIIIRLLREEESLDNIKQYYVSAKCR-XKYXAXVXLW-CIKMGXQ-YFCXXKK 1100
AE ++ P IRL REEE+LDNI+Q+Y+ + K+ A L+ C+ + FC ++
Sbjct: 254 AERIIPEPNYIRLKREEETLDNIRQFYIMCGSKEEKFSALCNLYGCLTIAQTIVFCQTRR 313
>UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1022
Score = 166 bits (404), Expect = 9e-40
Identities = 92/209 (44%), Positives = 118/209 (56%), Gaps = 5/209 (2%)
Frame = +1
Query: 313 IQRXAPXSPLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQS 492
+QR P SPLYS+ +F L L P +LK + F P++IQ AQ+
Sbjct: 605 VQRQDPKSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQA 664
Query: 493 QSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAV 672
QSGTGKTAAFVL L R+D N PQ +CL+PT ELA Q GEV KM KF +K+ YA+
Sbjct: 665 QSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAI 724
Query: 673 RGEELP--RGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQ 846
+G + RG K+T+ I+IGTPG D+ K+ D KI+ VLDEADVMI QG
Sbjct: 725 KGGNMAAMRGRKLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDI 784
Query: 847 CIRIHKCL---XSTCQMMFFSATYGTAVM 924
I+ + + Q M FSATY V+
Sbjct: 785 STTIYNMVEDASDSVQSMLFSATYDEPVI 813
Score = 44.0 bits (99), Expect = 0.008
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +3
Query: 939 MVSNPIIIRLLREEESLDNIKQYYVSAKCR-XKYXAXVXLW 1058
++ N I++ L REE++L NIKQ+YV CR KY A V L+
Sbjct: 819 IIKNAIVVMLKREEQALPNIKQFYVQCACRDSKYAAIVNLY 859
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 157 bits (382), Expect = 4e-37
Identities = 90/210 (42%), Positives = 124/210 (59%)
Frame = +1
Query: 298 QLALAIQRXAPXSPLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQX 477
++ LA + P SPLYS K+F L L P LLKG+ A F PSKIQ +
Sbjct: 74 KVKLADIQADPNSPLYSAKSFDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRN 133
Query: 478 XXAQSQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIK 657
AQSQSGTGKTAAF L L+RV+ PQ +CL+P+ ELA QT EV +M KF +I
Sbjct: 134 MIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTLEVVQEMGKF-TKIT 192
Query: 658 LKYAVRGEELPRGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGH 837
+ V + + +I +++GTPG + D ++ + + KIK+FVLDEAD M+++QG
Sbjct: 193 SQLIV-PDSFEKNKQINAQVIVGTPGTVLDL-MRRKLMQLQKIKIFVLDEADNMLDQQGL 250
Query: 838 QXQCIRIHKCLXSTCQMMFFSATYGTAVMQ 927
QCIR+ + L Q++ FSAT+ AV Q
Sbjct: 251 GDQCIRVKRFLPKDTQLVLFSATFADAVRQ 280
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 151 bits (367), Expect = 3e-35
Identities = 91/219 (41%), Positives = 127/219 (57%)
Frame = +1
Query: 280 QGLVASQLALAIQRXAPXSPLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXX 459
+GL + L IQ+ P SPLYSVKTF L L P LLKGV A G+ PSKIQ
Sbjct: 46 EGLDEFGIQLDIQQSDPNSPLYSVKTFEELGLKPELLKGVYAMGYNKPSKIQEAALPIII 105
Query: 460 XXXXQXXXAQSQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAK 639
AQSQSGTGKTAAF L L+ VD + PQ +C+SPT ELA+QT EV +K+ +
Sbjct: 106 QSPNNLI-AQSQSGTGKTAAFTLGMLNCVDPSINAPQAICISPTKELALQTFEVISKIGQ 164
Query: 640 FCPEIKLKYAVRGEELPRGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVM 819
F IK + E+P+ +T+ ++IGTPGK+ + +K + +K+ VLDEAD +
Sbjct: 165 F-SNIKPLLYISEIEVPK--NVTNQVIIGTPGKILENVIK-KQLSVKFLKMVVLDEADFI 220
Query: 820 INRQGHQXQCIRIHKCLXSTCQMMFFSATYGTAVMQLLR 936
+ + Q I++ L S ++ FSAT+ V +L++
Sbjct: 221 VKMKNVPNQIAMINRLLPSNVKVCLFSATFSMGVEELIK 259
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 146 bits (353), Expect = 1e-33
Identities = 84/200 (42%), Positives = 112/200 (56%), Gaps = 4/200 (2%)
Frame = +1
Query: 337 PLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTA 516
PLYSVK+F L L LL G+ + GF PS IQ + AQSQSGTGKTA
Sbjct: 43 PLYSVKSFEDLQLKSELLNGISSMGFRKPSSIQERALPMLLENQPKNLIAQSQSGTGKTA 102
Query: 517 AFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG--EELP 690
F+L LS++D N + Q LC++PT EL Q EVA M+KF +K+ A++G ++
Sbjct: 103 TFLLTMLSKIDVNDPFCQCLCMAPTRELVNQIAEVAIIMSKFMNNVKITCAIKGLSPDIL 162
Query: 691 RGSKITDHILIGTPGKMFDWGVKFG--MFDMGKIKVFVLDEADVMINRQGHQXQCIRIHK 864
G +I I+IGTPG + W F+ K+KVFVLDEAD++I RI
Sbjct: 163 EG-QINSQIIIGTPGTLKFWTTDNSSLYFNPKKLKVFVLDEADILIETPEFLNIAKRIKS 221
Query: 865 CLXSTCQMMFFSATYGTAVM 924
+ + CQ++ FSATY VM
Sbjct: 222 KVTNNCQILLFSATYDERVM 241
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 142 bits (344), Expect = 2e-32
Identities = 87/211 (41%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Frame = +1
Query: 298 QLALAIQRXAPXSPLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQX 477
++ LA + P SPLYSV++F L+L +L+KG+ A GF PSKIQ +
Sbjct: 130 EVKLADLQGDPNSPLYSVQSFKELNLHEDLMKGIIAAGFQKPSKIQEKALPLLLSNPPRN 189
Query: 478 XXAQSQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIK 657
QSQSGTGKTAAF L LSRVD PQ +C++P+ ELA Q EV ++ +F ++
Sbjct: 190 LIGQSQSGTGKTAAFTLNMLSRVDPTIPTPQAICIAPSRELARQIQEVIDQIGQF-TQVG 248
Query: 658 LKYAVRGEELPRGSKITDHILIGTPGKMFDWGVKFG-MFDMGKIKVFVLDEADVMINRQG 834
A+ G R S+I ILIGTPG + D ++ + D I+V VLDEAD +I +QG
Sbjct: 249 TFLAIPG-SWSRNSRIDKQILIGTPGTLVDMLMRGSRILDPRMIRVLVLDEADELIAQQG 307
Query: 835 HQXQCIRIHKCLXSTCQMMFFSATYGTAVMQ 927
Q RI + L Q + FSAT+ V +
Sbjct: 308 LGEQTFRIKQLLPPNVQNVLFSATFNDDVQE 338
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 138 bits (335), Expect = 2e-31
Identities = 80/212 (37%), Positives = 119/212 (56%), Gaps = 3/212 (1%)
Frame = +1
Query: 283 GLVASQLALAIQRXAPX--SPLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXX 456
GL S + +Q P SPL S+ +F L L ++ G+ A F PSKIQ
Sbjct: 71 GLQESNYDVEVQLGDPDTDSPLSSISSFSELGLPQGIIDGLLAMNFKKPSKIQARALPLM 130
Query: 457 XXXXXQXXXAQSQSGTGKTAAFVLAXLSRVDSNK-XYPQVLCLSPTYELAIQTGEVAAKM 633
+ AQSQSGTGKT AFV+ LSRVD N+ PQ L L+P+ ELA Q V +
Sbjct: 131 LSNPPRNMIAQSQSGTGKTGAFVVTILSRVDFNQPNQPQALALAPSRELARQIQSVIQSI 190
Query: 634 AKFCPEIKLKYAVRGEELPRGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEAD 813
+FC + + A+ G + R + + ++++GTPG + D ++ FD+ ++K+ V+DEAD
Sbjct: 191 GQFCTGLVVDAAIPG-AISRETGVKANVVVGTPGTVMDL-IRRRQFDVSQLKLLVVDEAD 248
Query: 814 VMINRQGHQXQCIRIHKCLXSTCQMMFFSATY 909
M+++QG QC+R+ L T Q + FSAT+
Sbjct: 249 NMLDQQGLGEQCVRVKNMLPKTIQTLLFSATF 280
>UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2;
Cryptosporidium|Rep: DEAD-box RNA helicase -
Cryptosporidium hominis
Length = 518
Score = 120 bits (290), Expect = 6e-26
Identities = 77/208 (37%), Positives = 111/208 (53%), Gaps = 1/208 (0%)
Frame = +1
Query: 289 VASQLALAIQRXAPXSPLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXX 468
V + ++++Q P + LYS K + L+L P+LLKG+ GF PSKIQ
Sbjct: 91 VQNNSSISVQTVDPKAQLYSAKDWSDLNLSPDLLKGIYNKGFNRPSKIQAAALPLILNSP 150
Query: 469 XQXXXAQSQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCP 648
AQ+ +G+GKTA F LA L +VD+ +PQ +CL PT ELA Q +V ++ KF
Sbjct: 151 MNLI-AQAHNGSGKTATFALAMLGKVDTRIIHPQCMCLCPTRELARQNQDVVNELGKFTG 209
Query: 649 EIKLKYAVRGEELPRGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMI-N 825
+G++ + I I+I TPGKM D+ +K F +K+ V+DEAD MI +
Sbjct: 210 ITTWLVVAQGDKYDK--TIGSQIIICTPGKMQDF-LKKRSFPTEFMKLMVIDEADEMIDH 266
Query: 826 RQGHQXQCIRIHKCLXSTCQMMFFSATY 909
R Q +I K Q++ FSATY
Sbjct: 267 RNMMASQVGQIRKFFRQNLQILLFSATY 294
>UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; core eudicotyledons|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Arabidopsis thaliana (Mouse-ear cress)
Length = 496
Score = 118 bits (284), Expect = 3e-25
Identities = 74/204 (36%), Positives = 104/204 (50%), Gaps = 8/204 (3%)
Frame = +1
Query: 334 SPLYSVKTFXALHLXPNLLKGVXAX-GFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGK 510
+P S F L+L P L+KG+ F PSKIQ + AQ+ +G+GK
Sbjct: 85 TPYTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPHKHLIAQAHNGSGK 144
Query: 511 TAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKF---CPEIKLKYAVRG- 678
T FVL LSRVD PQ LC+ PT ELA Q EV KM KF E+ + + RG
Sbjct: 145 TTCFVLGMLSRVDPTLREPQALCICPTRELANQNMEVLQKMGKFTGITAELAVPDSTRGA 204
Query: 679 EELPRGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRI 858
RG+ ++ H++IGTPG + W + F + +K+ V DEAD M+ G + ++I
Sbjct: 205 PAATRGAPVSAHVVIGTPGTLKKW-MAFKRLGLNHLKILVFDEADHMLATDGFRDDSLKI 263
Query: 859 HKCL---XSTCQMMFFSATYGTAV 921
K + Q++ FSAT+ V
Sbjct: 264 MKDIGRVNPNFQVLLFSATFNETV 287
>UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Oryza sativa subsp. japonica (Rice)
Length = 505
Score = 108 bits (260), Expect = 2e-22
Identities = 75/213 (35%), Positives = 102/213 (47%), Gaps = 10/213 (4%)
Frame = +1
Query: 313 IQRXAPXSPLY-SVKTFXALHLXPNLLKGVX-AXGFXAPSKIQXXXXXXXXXXXXQXXXA 486
IQ +Y S F L L P LLKG+ GF PSKIQ + A
Sbjct: 86 IQAVTSGGTVYESAAAFEDLKLTPELLKGLHDEMGFSRPSKIQAVTLPMILTPPYKDLIA 145
Query: 487 QSQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKY 666
Q+ +G+GKT FVL LSRVD N+ Q +C+ PT ELA Q V +M KF I
Sbjct: 146 QAHNGSGKTTCFVLGMLSRVDPNRKVTQAICICPTRELAQQNKSVLMRMGKF-TGITCAC 204
Query: 667 AVRGEE-----LPRGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQ 831
A+ + + + KITD ++IGT G + W + IK+ V DEAD M+
Sbjct: 205 AIPPAQKDYVPIAKMPKITDQVVIGTSGTLMKW-INHKKILTNDIKILVFDEADHMLAED 263
Query: 832 GHQXQCIRIHKCLXST---CQMMFFSATYGTAV 921
G + RI + + + CQ++ FSAT+ V
Sbjct: 264 GFRSDSERIMRDIQRSAGGCQVLLFSATFNERV 296
>UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2;
Ostreococcus|Rep: RNA helicase-like protein -
Ostreococcus tauri
Length = 492
Score = 107 bits (256), Expect = 8e-22
Identities = 70/202 (34%), Positives = 97/202 (48%), Gaps = 4/202 (1%)
Frame = +1
Query: 328 PXSPLYSVKTFXALHLXPNLLKGVXAX-GFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGT 504
P +P S KTF L L LL+G+ F PSKIQ + AQ+ +G+
Sbjct: 79 PSTPYSSAKTFEDLGLSAELLRGLYGEMKFEKPSKIQAETLPLILMPPHRNLIAQAHNGS 138
Query: 505 GKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEE 684
GKT F L LSR+D PQ L + PT EL +Q V +M K+ A +
Sbjct: 139 GKTTCFTLGMLSRIDPAVKTPQGLMICPTRELVVQNVSVMERMGKYTGITIASTADPKWD 198
Query: 685 LPRGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHK 864
+KI D +IGTPGK+ W ++ +K+ V DEAD M+ GH+ +I K
Sbjct: 199 NTNRNKIVDQAVIGTPGKILRW-MRERQLACNNMKILVFDEADHMMATDGHRVDSTKILK 257
Query: 865 CLXSTC---QMMFFSATYGTAV 921
L + Q++ FSAT+ AV
Sbjct: 258 HLSMSAKAWQVLLFSATFNEAV 279
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 106 bits (255), Expect = 1e-21
Identities = 70/187 (37%), Positives = 101/187 (54%), Gaps = 2/187 (1%)
Frame = +1
Query: 367 LHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXLSRV 546
L L P+LLKG+ GF PSKIQ AQ+++G+GKTA F LA LS+V
Sbjct: 104 LPLSPDLLKGIQNMGFAKPSKIQQCALPLILGSCTNII-AQAKNGSGKTATFALAMLSKV 162
Query: 547 DSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD-HILI 723
+ N Q LC+ PT ELA Q +V K+ +F +IK V + PR H+ +
Sbjct: 163 NVNVPLVQALCICPTRELATQNVQVIQKLGQF-TQIKCFLGV--PQCPRYEDNDQYHLYV 219
Query: 724 GTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQ-XQCIRIHKCLXSTCQMMFFS 900
GTPGK D+ +K + ++ + + VLDEAD +IN+Q + Q ++I Q++ FS
Sbjct: 220 GTPGKTMDF-LKKRIMNVTNVVMLVLDEADELINQQNNMGPQVLQIRNFFRGPVQIVLFS 278
Query: 901 ATYGTAV 921
AT+ V
Sbjct: 279 ATFSDNV 285
>UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08663 protein - Schistosoma
japonicum (Blood fluke)
Length = 193
Score = 105 bits (253), Expect = 2e-21
Identities = 57/125 (45%), Positives = 73/125 (58%)
Frame = +1
Query: 301 LALAIQRXAPXSPLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXX 480
L + R P PL+SV+TF L+L LLKG+ A GF PS IQ Q
Sbjct: 59 LDFEVLRSDPDHPLHSVRTFQELNLKEPLLKGIAAMGFYKPSTIQERALSSLISDNPQNM 118
Query: 481 XAQSQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKL 660
AQSQSGTGKTA F+LA LSR+ ++ Y Q LC++PT ELA+Q V +MA+F ++
Sbjct: 119 IAQSQSGTGKTATFLLAMLSRIRTDVHYCQCLCMAPTRELALQIESVGRQMAQFMTDVSF 178
Query: 661 KYAVR 675
AVR
Sbjct: 179 ATAVR 183
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 102 bits (245), Expect = 2e-20
Identities = 72/194 (37%), Positives = 93/194 (47%), Gaps = 3/194 (1%)
Frame = +1
Query: 334 SPLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKT 513
S S +F L L P +L+ V A G+ PS IQ AQ+ GTGKT
Sbjct: 18 STFMSELSFAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQT--GTGKT 75
Query: 514 AAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP- 690
AAF L LSR+D+N PQ+L L+PT ELAIQ E A + G++
Sbjct: 76 AAFALPLLSRIDANVAEPQILVLAPTRELAIQVAEAFTTYASKFRNFHVLPIYGGQDFSP 135
Query: 691 --RGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHK 864
RG K +++GTPG+M D ++ G + +K VLDEAD M+ R G I
Sbjct: 136 QIRGLKRGAQVIVGTPGRMLD-HLRKGTLKLDGLKALVLDEADEML-RMGFIDDVEAILA 193
Query: 865 CLXSTCQMMFFSAT 906
TCQ FSAT
Sbjct: 194 KTPDTCQRALFSAT 207
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 100 bits (239), Expect = 9e-20
Identities = 67/200 (33%), Positives = 101/200 (50%), Gaps = 3/200 (1%)
Frame = +1
Query: 346 SVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFV 525
SV++F L L LLK + GF PS IQ + Q+Q+GTGKTAAF
Sbjct: 3 SVESFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEG--RDVIGQAQTGTGKTAAFG 60
Query: 526 LAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL-PRGSK 702
L L R+D+ Q L L PT ELA+Q +AK +++ G+ + P+ S
Sbjct: 61 LPLLQRIDAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPIEPQASA 120
Query: 703 IT--DHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXS 876
+ +++GTPG++ D + G +G +++ VLDEAD M++ G + RI +
Sbjct: 121 LRRGAQVVVGTPGRILD-HINRGTLQLGVVRMTVLDEADEMLD-MGFREDIERILSEMPE 178
Query: 877 TCQMMFFSATYGTAVMQLLR 936
Q FFSAT +++L R
Sbjct: 179 WVQSAFFSATMPDGILELAR 198
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 96.7 bits (230), Expect = 1e-18
Identities = 66/197 (33%), Positives = 101/197 (51%), Gaps = 3/197 (1%)
Frame = +1
Query: 349 VKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVL 528
V+TF L L +LL+G+ + GF PS IQ + AQ+QSGTGKT F +
Sbjct: 55 VETFEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILG--KDVLAQAQSGTGKTGTFTI 112
Query: 529 AXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG---EELPRGS 699
L R+D N+ QV+ L+P ELA Q +V + ++ I+ + G +E
Sbjct: 113 GALQRIDPNQRKTQVIILAPVRELAKQIYDVVKGIGQYL-NIEAFCCIGGTSTQETREKC 171
Query: 700 KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXST 879
K HI+I TPG++ D +K D +++ V+DEAD M++ QG I K +
Sbjct: 172 KQGVHIIIATPGRLIDM-MKNKYLDATFMRLLVVDEADQMLD-QGFSDNFAEILKMVPGD 229
Query: 880 CQMMFFSATYGTAVMQL 930
Q+ FSAT+ +++L
Sbjct: 230 IQIALFSATFPQEIIEL 246
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 95.9 bits (228), Expect = 2e-18
Identities = 66/200 (33%), Positives = 102/200 (51%), Gaps = 5/200 (2%)
Frame = +1
Query: 346 SVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFV 525
S F L L LL+ + G+ +PS IQ + Q+Q+GTGKTA+F
Sbjct: 5 SFPLFADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNN--RDVLGQAQTGTGKTASFA 62
Query: 526 LAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKI 705
L L+R+D + PQ L L+PT ELAIQ E + A + P + G+ G+++
Sbjct: 63 LPILARIDIKQTTPQALVLAPTRELAIQVAEAFQRYATYIPGFHVLPIYGGQSY--GAQL 120
Query: 706 TD-----HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCL 870
+ H+++GTPG++ D ++ G D+ +IK VLDEAD M+ R G I +
Sbjct: 121 SALRRGVHVVVGTPGRVID-HLEKGSLDLSRIKTMVLDEADEML-RMGFIDDVETILQKT 178
Query: 871 XSTCQMMFFSATYGTAVMQL 930
+ Q FSAT +A+ ++
Sbjct: 179 PESRQTALFSATMPSAIKRI 198
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 95.9 bits (228), Expect = 2e-18
Identities = 63/198 (31%), Positives = 99/198 (50%), Gaps = 3/198 (1%)
Frame = +1
Query: 352 KTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLA 531
KTF + LL+ + GF P+ IQ + Q+Q+GTGKTAAF +
Sbjct: 5 KTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDG--KDVTGQAQTGTGKTAAFGIP 62
Query: 532 XLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP---RGSK 702
+ R+D + Q L LSPT ELAIQT E +++ K+ + + G+ + R K
Sbjct: 63 IIERLDPDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPIERQLRALK 122
Query: 703 ITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTC 882
T ++IGTPG++ D +K G + + +F+LDEAD M++ G + I +
Sbjct: 123 GTVQVVIGTPGRVID-HIKRGTLHLDSVTMFILDEADQMLD-MGFREDIEDIFRDTPKDR 180
Query: 883 QMMFFSATYGTAVMQLLR 936
Q + FSAT ++ + R
Sbjct: 181 QTILFSATMPQPILDITR 198
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 95.1 bits (226), Expect = 3e-18
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 7/206 (3%)
Frame = +1
Query: 334 SPLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKT 513
SP S TF L + P +L+ + G+ +P+ IQ AQ+ GTGKT
Sbjct: 7 SPAASAATFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQT--GTGKT 64
Query: 514 AAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKL-------KYAV 672
AAF + LS++D PQ L L PT ELA+Q E + + ++ + YAV
Sbjct: 65 AAFAIPMLSKIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAV 124
Query: 673 RGEELPRGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCI 852
+ L RG++ +++GTPG+M D ++ D+ ++ VLDEAD M+ G
Sbjct: 125 QLAGLRRGAQ----VVVGTPGRMID-HLERATLDLSRVDFLVLDEADEMLT-MGFADDVE 178
Query: 853 RIHKCLXSTCQMMFFSATYGTAVMQL 930
RI Q+ FSAT A+ +L
Sbjct: 179 RILSETPEYKQVALFSATMPPAIRKL 204
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 94.3 bits (224), Expect = 6e-18
Identities = 65/199 (32%), Positives = 97/199 (48%), Gaps = 4/199 (2%)
Frame = +1
Query: 349 VKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVL 528
V F + L P LL+GV + GF APS+IQ + AQ+QSGTGKT AF +
Sbjct: 90 VDDFDQMDLPPALLQGVYSYGFRAPSEIQAIAIGAIRDPSNRHVIAQAQSGTGKTGAFSI 149
Query: 529 AXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKIT 708
LS++D ++ Q L L+PT ELA Q V ++ P + + + G + ++
Sbjct: 150 GVLSKIDVSQKTTQALVLAPTRELATQIFNVFKEIGSRIPGLDIAIFIGGAQRVVDAQAR 209
Query: 709 ----DHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXS 876
HI I TPG+ D V G + K+ VLDEAD M++ Q I +
Sbjct: 210 AASHPHICICTPGRALDLIVS-GHLRVQNFKMAVLDEADQMLS-DNFIEQVNDIMEYFPE 267
Query: 877 TCQMMFFSATYGTAVMQLL 933
Q++ FSAT ++ ++
Sbjct: 268 DVQILLFSATISQSIFHIM 286
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 94.3 bits (224), Expect = 6e-18
Identities = 68/200 (34%), Positives = 103/200 (51%), Gaps = 4/200 (2%)
Frame = +1
Query: 349 VKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVL 528
V F ++L +LL+G+ A GF PS IQ AQ+QSGTGKTA F +
Sbjct: 32 VDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYD--VIAQAQSGTGKTATFAI 89
Query: 529 AXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKF----CPEIKLKYAVRGEELPRG 696
+ L +++ Q L L+PT ELA Q +V + + C VR E+ +
Sbjct: 90 SILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVR-NEMQKL 148
Query: 697 SKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXS 876
HI++GTPG++FD + IK+FVLDEAD M++R G + Q I + L +
Sbjct: 149 QAEAPHIVVGTPGRVFDM-LNRRYLSPKWIKMFVLDEADEMLSR-GFKDQIYEIFQKLNT 206
Query: 877 TCQMMFFSATYGTAVMQLLR 936
+ Q++ SAT T V+++ +
Sbjct: 207 SIQVVLLSATMPTDVLEVTK 226
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 93.9 bits (223), Expect = 8e-18
Identities = 64/194 (32%), Positives = 94/194 (48%), Gaps = 3/194 (1%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L++ P + K V GF S IQ + Q+Q+GTGKTAAF + L
Sbjct: 6 FKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAH--KDVTGQAQTGTGKTAAFGIPLL 63
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD-- 711
+DS Q + L PT ELAIQ E K++ + P+I + G+ + R K
Sbjct: 64 ENIDSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQIKALQKG 123
Query: 712 -HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQM 888
I+IGTPG++ D + G + IK +LDEAD M++ G + I + + Q
Sbjct: 124 VQIIIGTPGRVMD-HIDRGTLSLNNIKTVILDEADEMLD-MGFREDIEYILEDIPYERQF 181
Query: 889 MFFSATYGTAVMQL 930
+ FSAT ++QL
Sbjct: 182 LLFSATLPQEILQL 195
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 93.9 bits (223), Expect = 8e-18
Identities = 62/195 (31%), Positives = 99/195 (50%), Gaps = 3/195 (1%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF + L +LL+G+ A GF PS IQ + AQSQSGTGKTA F ++
Sbjct: 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKG--RDVIAQSQSGTGKTATFSISV 96
Query: 535 LSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD- 711
L +D Q L L+PT ELA+Q + + + ++ + G + + D
Sbjct: 97 LQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDY 155
Query: 712 --HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQ 885
H++ GTPG++FD ++ IK+ VLDEAD M+N+ G + Q +++ L Q
Sbjct: 156 GQHVVAGTPGRVFDM-IRRRSLRTRAIKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQ 213
Query: 886 MMFFSATYGTAVMQL 930
++ SAT ++++
Sbjct: 214 VVLISATLPHEILEM 228
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 93.5 bits (222), Expect = 1e-17
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 2/209 (0%)
Frame = +1
Query: 289 VASQLALAIQRXAPXSPLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXX 468
+A LA +R + +P VKTF L L NLL G+ F P+KIQ
Sbjct: 5 IAHSLAGGEERSSDVAP-GQVKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAK- 62
Query: 469 XQXXXAQSQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCP 648
QS+SGTGKT +V+A + + N P + + PT ELAIQ + + K
Sbjct: 63 -MDLIIQSKSGTGKTLIYVIAVVQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFR 121
Query: 649 EIKLKYAVRGEELPRGSKITD--HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMI 822
+ K + G ++ + K + ++IGTPG++ + +FD+ K+++ VLDEAD +
Sbjct: 122 DFKCSAFIGGTDVAKDRKRMNESRVIIGTPGRLLHL-YENRVFDVSKLRLLVLDEADQLY 180
Query: 823 NRQGHQXQCIRIHKCLXSTCQMMFFSATY 909
+ Q ++ + + Q++ SATY
Sbjct: 181 QTKSLQHTVSKLIEAMPKNRQIIACSATY 209
>UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase -
Plasmodium falciparum
Length = 576
Score = 92.7 bits (220), Expect = 2e-17
Identities = 67/195 (34%), Positives = 101/195 (51%), Gaps = 2/195 (1%)
Frame = +1
Query: 343 YSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAF 522
+S T+ L + L++ + F PSKIQ + AQSQ+G+GKT F
Sbjct: 157 HSKNTWEELKIDNELIQILTYLKFLGPSKIQAYALPIILSSN-KNLIAQSQNGSGKTLTF 215
Query: 523 VLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSK 702
V+A L +++ Q +C+ PT EL+ Q +V K+ +K+ AV E R +K
Sbjct: 216 VIAMLCKINRTLSSLQAVCICPTRELSQQNYDVVCNFTKYL-NVKVFLAVPLCE--RYNK 272
Query: 703 ITDH-ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMIN-RQGHQXQCIRIHKCLXS 876
+ I +GTPGK D+ +K D IK+FVLDEAD +I+ + Q I + L
Sbjct: 273 SGGYQIYVGTPGKTLDF-LKRKFIDTKNIKLFVLDEADDLIDIKNNMSSQVETIKRFLPR 331
Query: 877 TCQMMFFSATYGTAV 921
+CQ++ FSATY +V
Sbjct: 332 SCQILLFSATYNDSV 346
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 92.7 bits (220), Expect = 2e-17
Identities = 62/193 (32%), Positives = 97/193 (50%), Gaps = 3/193 (1%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L LL G+ GF PS IQ + A++++GTGKTA+F++ L
Sbjct: 38 FEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTG--RDILARAKNGTGKTASFIIPTL 95
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRG---SKIT 708
+R++++ + Q L L PT ELA+QT +V + P +++ G L +
Sbjct: 96 NRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGTTLRDDILRLQQP 155
Query: 709 DHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQM 888
HIL+GTPG++ D G K G+ + K VFV+DEAD +++ + C Q+
Sbjct: 156 VHILVGTPGRILDLGSK-GIASLNKCGVFVMDEADKLLSEDFMPVIEQTLALC-PQERQV 213
Query: 889 MFFSATYGTAVMQ 927
M FSAT+ V +
Sbjct: 214 MLFSATFPWTVKE 226
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 92.3 bits (219), Expect = 2e-17
Identities = 63/186 (33%), Positives = 94/186 (50%), Gaps = 3/186 (1%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L L +++ V G+ PS IQ + Q+Q+GTGKTAAF L L
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAG--RDVLGQAQTGTGKTAAFALPLL 74
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPR---GSKIT 708
+R N+ PQVL L+PT ELAIQ E + A ++ G+ + K
Sbjct: 75 TRTVLNQVKPQVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSYGQQLAALKRG 134
Query: 709 DHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQM 888
H+++GTPG++ D ++ G D+ ++K VLDEAD M+ R G + + L ++ Q+
Sbjct: 135 VHVIVGTPGRVID-HLERGTLDLSELKTLVLDEADEML-RMGFIEDVEEVLRKLPASRQV 192
Query: 889 MFFSAT 906
FSAT
Sbjct: 193 ALFSAT 198
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 91.9 bits (218), Expect = 3e-17
Identities = 65/196 (33%), Positives = 95/196 (48%), Gaps = 3/196 (1%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF +L LL G+ GF PS IQ + A++++GTGKTAAFV+
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITG--RDILARAKNGTGKTAAFVIPT 104
Query: 535 LSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRG---SKI 705
L +V Q L + PT ELA+QT +V + K C I G L
Sbjct: 105 LEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGTNLRDDILRLNE 163
Query: 706 TDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQ 885
T HIL+GTPG++ D + + D+ +F++DEAD M++R + +I L T Q
Sbjct: 164 TVHILVGTPGRVLDLASR-KVADLSDCSLFIMDEADKMLSRD-FKTIIEQILSFLPPTHQ 221
Query: 886 MMFFSATYGTAVMQLL 933
+ FSAT+ V + +
Sbjct: 222 SLLFSATFPLTVKEFM 237
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 91.5 bits (217), Expect = 4e-17
Identities = 67/187 (35%), Positives = 89/187 (47%), Gaps = 3/187 (1%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF L L P LLK + + G+ P+ IQ AQ+ GTGKTAAF L
Sbjct: 6 TFADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQT--GTGKTAAFSLPL 63
Query: 535 LSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP---RGSKI 705
LSR+D+ K PQ L L PT ELAIQ E A+ + G ++ R K
Sbjct: 64 LSRIDTTKNKPQALVLCPTRELAIQVAEAFQTYARGVDNFHVLPIYGGADMRNQLRALKQ 123
Query: 706 TDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQ 885
+++GTPG++ D ++ G D+ +K VLDEAD M+ R G I + Q
Sbjct: 124 NPQVIVGTPGRVMD-HLRRGTLDLSDLKHLVLDEADEML-RMGFIEDIDWILEHTPKDKQ 181
Query: 886 MMFFSAT 906
FSAT
Sbjct: 182 TALFSAT 188
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 89.8 bits (213), Expect = 1e-16
Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 3/197 (1%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF L L +LK V GF PS IQ +Q+G+GKTAAF L
Sbjct: 6 TFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNG--NDVLGMAQTGSGKTAAFALPL 63
Query: 535 LSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP---RGSKI 705
L+++D ++ +PQ+L ++PT ELAIQ + K+ ++ G+ R K
Sbjct: 64 LAQIDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRALKQ 123
Query: 706 TDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQ 885
+++GTPG++ D ++ G ++ +++ VLDEAD M+ R G + L Q
Sbjct: 124 GAQVVVGTPGRILD-HIRRGTLNLSELRFIVLDEADEML-RMGFIDDVETVMAELPENHQ 181
Query: 886 MMFFSATYGTAVMQLLR 936
FSAT + ++ +
Sbjct: 182 TALFSATMPEPIRRITK 198
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 89.4 bits (212), Expect = 2e-16
Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 7/198 (3%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F +L L NLL V + GF + + IQ + ++Q+GTGKTAAF L L
Sbjct: 17 FASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAG--KDVLGEAQTGTGKTAAFGLPAL 74
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKL-------KYAVRGEELPRG 696
+++D++ PQ++ L+PT ELA+Q E K +++ Y + ++L RG
Sbjct: 75 AKIDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSYGPQFQQLERG 134
Query: 697 SKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXS 876
++ +++GTPG++ D ++ + +++V VLDEAD M+N G I +
Sbjct: 135 AQ----VVVGTPGRLMD-HLRRKSLKLDELRVCVLDEADEMLN-MGFLEDIQWILDHIPK 188
Query: 877 TCQMMFFSATYGTAVMQL 930
T QM FSAT A+ ++
Sbjct: 189 TAQMCLFSATMPPAIRKI 206
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 88.6 bits (210), Expect = 3e-16
Identities = 68/195 (34%), Positives = 94/195 (48%), Gaps = 4/195 (2%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L LLK + F +P+K+Q + +SQ+G+GKTAAF +
Sbjct: 6 FSDYQLSDELLKSISMLNFESPTKVQQQVIPAILEH--KDIIVKSQTGSGKTAAFAIPIC 63
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGE----ELPRGSKI 705
VD ++ PQ L L PT ELAIQ E + +F +K+ AV G+ + K
Sbjct: 64 QLVDWDENKPQALVLVPTRELAIQVKEDMFNIGRF-KRLKVA-AVYGKAPFYHQEKELKQ 121
Query: 706 TDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQ 885
H+++GTPG++ D K G FD +IK V+DEAD M N G Q I K L
Sbjct: 122 KTHVVVGTPGRIIDHMEK-GTFDTSQIKYLVIDEADEMFN-MGFVDQIETIIKDLSKKRV 179
Query: 886 MMFFSATYGTAVMQL 930
M SAT +A+ L
Sbjct: 180 TMLLSATMPSAIETL 194
>UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila
pseudoobscura|Rep: GA19670-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1007
Score = 88.6 bits (210), Expect = 3e-16
Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 2/212 (0%)
Frame = +1
Query: 280 QGLVASQLALAIQRXAPXSPLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXX 459
+G +A LA R + +K F ALHL +++G+ A F P+KIQ
Sbjct: 2 EGAIAHNLANGQNRTSDVEA-GQMKHFSALHLRRQVMRGLAAENFRTPTKIQAAAIPIAL 60
Query: 460 XXXXQXXXAQSQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAK 639
QS+SGTGKT +V+ L + +P+VL + PT ELA+Q ++ + +
Sbjct: 61 TG--MDLLVQSKSGTGKTLIYVVTALQMCSLSTQHPEVLVILPTRELALQVHDIFRFLGE 118
Query: 640 FCPEIKLKYAVRGEELPRG-SKITD-HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEAD 813
K+ + G ++ R K+ + H+ IGTPG++ K G+ +M +K+ VLDEAD
Sbjct: 119 KLRSFKVSSFMGGTDVTRDREKLRNCHVAIGTPGRLLQLHEK-GVLNMSMVKLLVLDEAD 177
Query: 814 VMINRQGHQXQCIRIHKCLXSTCQMMFFSATY 909
+ Q + L Q++ SAT+
Sbjct: 178 QLYVTASLQKTVNALIAVLPLQRQVIACSATF 209
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 88.6 bits (210), Expect = 3e-16
Identities = 64/187 (34%), Positives = 95/187 (50%), Gaps = 3/187 (1%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF L L +LL+ V + GF + IQ + Q+Q+GTGKTAAF L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQG--KDIIGQAQTGTGKTAAFGLPL 60
Query: 535 LSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP---RGSKI 705
L +VD++K Q + ++PT ELAIQ GE K+ K +++ G+++ R K
Sbjct: 61 LDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKH-KRVRILPIYGGQDINRQIRALKK 119
Query: 706 TDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQ 885
HI++GTPG++ D + + ++ VLDEAD M+N G I + T Q
Sbjct: 120 HPHIIVGTPGRILD-HINRKTLRLQNVETVVLDEADEMLN-MGFIEDIEAILTDVPETHQ 177
Query: 886 MMFFSAT 906
+ FSAT
Sbjct: 178 TLLFSAT 184
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 88.2 bits (209), Expect = 4e-16
Identities = 64/201 (31%), Positives = 98/201 (48%), Gaps = 5/201 (2%)
Frame = +1
Query: 349 VKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVL 528
+ TF L + + +K + G P+ IQ +Q+GTGKTAAF L
Sbjct: 1 MSTFAGLGIRKDYIKSIKEIGITKPTDIQEKAIPVLLKSPTDFIGL-AQTGTGKTAAFGL 59
Query: 529 AXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPE-IKLKYAVRGEELPR---G 696
L +D+N + Q L LSPT EL Q + K K+ + I L+ GE++ R
Sbjct: 60 PVLHHIDANSDHIQALILSPTRELVQQIKKQLFKFTKYVDDRIFLEAVFGGEKIDRQMNN 119
Query: 697 SKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHK-CLX 873
K T HI+I TPG++ D ++ G D+ +K +LDEAD M++ G + RI K
Sbjct: 120 LKRTTHIVIATPGRLIDL-IERGAVDISHVKTVILDEADEMLS-MGFKQDLNRILKFTTK 177
Query: 874 STCQMMFFSATYGTAVMQLLR 936
S + FSAT + ++++
Sbjct: 178 SDRKTWLFSATMPDEIKRIVK 198
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 87.4 bits (207), Expect = 7e-16
Identities = 63/199 (31%), Positives = 95/199 (47%), Gaps = 5/199 (2%)
Frame = +1
Query: 352 KTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLA 531
K F L L +++ V G+ P+ IQ + Q+Q+GTGKTAAF L
Sbjct: 7 KDFSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSG--RDVLGQAQTGTGKTAAFALP 64
Query: 532 XLSRVD--SNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP---RG 696
++ +D S PQVL L+PT ELAIQ E AK P + + G+E R
Sbjct: 65 LINNMDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGGQEYGSQIRA 124
Query: 697 SKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXS 876
K +++GT G++ D ++ G + ++ VLDEAD M+ R G + +
Sbjct: 125 LKQGVKVVVGTTGRVMD-HIEKGTLQLDNLRALVLDEADEML-RMGFIDDVKFVLSHVSD 182
Query: 877 TCQMMFFSATYGTAVMQLL 933
CQ + FSAT T + ++
Sbjct: 183 ECQRLLFSATIPTDIADII 201
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 86.6 bits (205), Expect = 1e-15
Identities = 62/197 (31%), Positives = 91/197 (46%), Gaps = 3/197 (1%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF L L +L+ + G+ PS IQ + +Q+G+GKTAAF L
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNG--RDVLGMAQTGSGKTAAFSLPL 64
Query: 535 LSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP---RGSKI 705
L +D PQ+L L+PT ELA+Q E +K + + G+ R +
Sbjct: 65 LQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQ 124
Query: 706 TDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQ 885
I++GTPG++ D +K G D+ K+ VLDEAD M+ R G I + Q
Sbjct: 125 GPQIVVGTPGRLLD-HLKRGTLDLSKLSGLVLDEADEML-RMGFIEDVETIMAQIPEGHQ 182
Query: 886 MMFFSATYGTAVMQLLR 936
FSAT A+ ++ R
Sbjct: 183 TALFSATMPEAIRRITR 199
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 86.2 bits (204), Expect = 2e-15
Identities = 65/203 (32%), Positives = 97/203 (47%), Gaps = 4/203 (1%)
Frame = +1
Query: 334 SPLYS-VKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGK 510
+P+ S +++F L L LL + G+ PS IQ ++Q+GTGK
Sbjct: 37 NPMTSPIESFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAG--HDLLGEAQTGTGK 94
Query: 511 TAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP 690
TAAF L L R+D PQVL L+PT ELAIQ E + AK P + G+ +
Sbjct: 95 TAAFALPLLDRLDLAVKNPQVLVLAPTRELAIQVAEAFQRYAKNLPGFHVLPVYGGQSMV 154
Query: 691 ---RGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIH 861
R H+++GTPG++ D ++ ++ + VLDEAD M+ R G I
Sbjct: 155 VQLRQLARGAHVIVGTPGRVMD-HIERKSLNLDSLTTLVLDEADEML-RMGFIDDVEWIL 212
Query: 862 KCLXSTCQMMFFSATYGTAVMQL 930
+ + Q FSAT A+ ++
Sbjct: 213 QHTPAERQTALFSATMPDAIRRV 235
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 86.2 bits (204), Expect = 2e-15
Identities = 61/196 (31%), Positives = 92/196 (46%), Gaps = 3/196 (1%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF L L +L + G+ PS IQ + Q+Q+GTGKTAAF L
Sbjct: 10 TFAELSLPSTILSTLETLGYETPSLIQAKTIPALLEG--RDVLGQAQTGTGKTAAFALPL 67
Query: 535 LSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPR---GSKI 705
LSR+D + PQVL L+PT ELA Q + + +++ G+E G +
Sbjct: 68 LSRLDLQRREPQVLVLAPTRELAQQVAASFVQYGRGVKGLEVLSLCGGQEYREQLSGLRR 127
Query: 706 TDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQ 885
+++GTPG++ D + G + + VLDEAD M+ R G R+ Q
Sbjct: 128 GAQVIVGTPGRVID-HLDRGSLKLDGLNALVLDEADEML-RMGFIDDVKRVVSDTPKDAQ 185
Query: 886 MMFFSATYGTAVMQLL 933
+FFSAT + +++
Sbjct: 186 RVFFSATLPDEISRIV 201
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 85.4 bits (202), Expect = 3e-15
Identities = 59/152 (38%), Positives = 84/152 (55%), Gaps = 3/152 (1%)
Frame = +1
Query: 484 AQSQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLK 663
AQ+Q+GTGKT AF+L L RV+ K Q L ++PT ELAIQ K+A+ I +
Sbjct: 45 AQAQTGTGKTLAFILPILERVNVEKPTIQALIITPTRELAIQITAETKKLAE-VKGINIL 103
Query: 664 YAVRGEELP---RGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQG 834
A G+++ R K + HI+IGTPG++ D ++ ++GK+ + VLDEAD M++ G
Sbjct: 104 AAYGGQDVEQQLRKLKGSIHIIIGTPGRLLD-HLRRKTINLGKLSMLVLDEADQMLH-MG 161
Query: 835 HQXQCIRIHKCLXSTCQMMFFSATYGTAVMQL 930
I + Q MFFSAT V L
Sbjct: 162 FLRDVEDIMTHIPKRRQNMFFSATMPNQVRTL 193
>UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=34; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX59 - Homo sapiens (Human)
Length = 619
Score = 85.4 bits (202), Expect = 3e-15
Identities = 53/152 (34%), Positives = 84/152 (55%), Gaps = 3/152 (1%)
Frame = +1
Query: 484 AQSQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLK 663
A + +G+GKTAAF+L + R P L L+PT ELAIQ A ++ P +K
Sbjct: 245 ASADTGSGKTAAFLLPVIMRALFESKTPSALILTPTRELAIQIERQAKELMSGLPRMKTV 304
Query: 664 YAVRGEEL-PRGSKITDH--ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQG 834
V G L P+ ++ H ++I TPG++ D +K ++ +K+ V+DEAD M+ + G
Sbjct: 305 LLVGGLPLPPQLYRLQQHVKVIIATPGRLLDI-IKQSSVELCGVKIVVVDEADTML-KMG 362
Query: 835 HQXQCIRIHKCLXSTCQMMFFSATYGTAVMQL 930
Q Q + I + + + CQ + SAT T++ QL
Sbjct: 363 FQQQVLDILENIPNDCQTILVSATIPTSIEQL 394
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 85.0 bits (201), Expect = 4e-15
Identities = 63/203 (31%), Positives = 96/203 (47%), Gaps = 6/203 (2%)
Frame = +1
Query: 346 SVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFV 525
++ F AL L P L G+ A G+ + +Q AQ+ +G+GKTAAF
Sbjct: 24 AMNEFSALPLSPALAPGIDALGYTVLTPVQAQSLPPILRGLD--VIAQAPTGSGKTAAFG 81
Query: 526 LAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKI 705
L L ++D Q L L PT ELA Q G+ K+A P +KL G +P G ++
Sbjct: 82 LGLLQKLDPALTRAQALVLCPTRELADQVGKQLRKLATGIPNMKLVVLTGG--MPLGPQL 139
Query: 706 TD------HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKC 867
H+++GTPG++ + K + +G ++ VLDEAD M++ G + I
Sbjct: 140 ASLEAHDPHVVVGTPGRIQELARKRAL-HLGGVRTLVLDEADRMLD-MGFEEPIREIASR 197
Query: 868 LXSTCQMMFFSATYGTAVMQLLR 936
Q + FSAT+ + L R
Sbjct: 198 CDKHRQSLLFSATFPDIIRTLAR 220
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 85.0 bits (201), Expect = 4e-15
Identities = 61/199 (30%), Positives = 98/199 (49%), Gaps = 3/199 (1%)
Frame = +1
Query: 349 VKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVL 528
++ F L L LLK V GF P+ IQ Q+ +GTGKTAA++L
Sbjct: 1 MEEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEG--HNLVGQAPTGTGKTAAYLL 58
Query: 529 AXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP---RGS 699
L R+ K QVL ++PT ELA+Q + AK+ K+ +++ G+ + RG
Sbjct: 59 PVLQRIQRGKK-AQVLIVTPTRELALQVADEVAKLGKYL-KVRALAVYGGQAIERQIRGL 116
Query: 700 KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXST 879
+ +++GTPG++ D + F +IK+ +LDEAD M++ G I L +
Sbjct: 117 RQGVEVIVGTPGRILD-HIGRKTFPAAEIKIVILDEADEMLD-MGFIDDIEAILNTLTNR 174
Query: 880 CQMMFFSATYGTAVMQLLR 936
Q + FSAT + +++
Sbjct: 175 QQTLLFSATLPAPIKTIIK 193
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 85.0 bits (201), Expect = 4e-15
Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 3/207 (1%)
Frame = +1
Query: 325 APXSPLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGT 504
A S S +F L L + + + G+ P+ +Q + +S++GT
Sbjct: 11 AAPSDYVSQASFDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDG--KDVIVRSKTGT 68
Query: 505 GKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCP-EIKLKY--AVR 675
GKTAAF + L R+ + P L + PT ELAIQ + +AK + Y A
Sbjct: 69 GKTAAFAIPILERIADGRRRPSALVMCPTRELAIQVAQEFTALAKHRDLSVVAVYGGASM 128
Query: 676 GEELPRGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIR 855
GE+L + + I++GTPG+++D ++ + + V LDEAD M+N G + R
Sbjct: 129 GEQLQK-LEAGAEIIVGTPGRIYD-HIRRRTLKLDETMVCCLDEADEMLN-MGFFEEVTR 185
Query: 856 IHKCLXSTCQMMFFSATYGTAVMQLLR 936
I L CQ + FSAT + Q++R
Sbjct: 186 ILDNLPKDCQQLLFSATVPADIEQIIR 212
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 85.0 bits (201), Expect = 4e-15
Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 6/200 (3%)
Frame = +1
Query: 352 KTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLA 531
+ F +L L +LKG+ + G+ PS IQ + A + +G+GKTAAF++
Sbjct: 231 ENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLG--KDIIAGAVTGSGKTAAFMIP 288
Query: 532 XLSRV---DSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGS- 699
+ R+ + +V+ L PT ELAIQ +V ++A+F I AV G L +
Sbjct: 289 IIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQEQ 348
Query: 700 --KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLX 873
K I+I TPG+ D F++ +++ V+DEAD M+ +G Q + I L
Sbjct: 349 MLKSRPDIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRML-EEGFQDELNEIMGLLP 407
Query: 874 STCQMMFFSATYGTAVMQLL 933
S Q + FSAT + + L+
Sbjct: 408 SNRQNLLFSATMNSKIKSLV 427
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 85.0 bits (201), Expect = 4e-15
Identities = 55/192 (28%), Positives = 89/192 (46%), Gaps = 4/192 (2%)
Frame = +1
Query: 373 LXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXLSRVDS 552
L P LL+ + GF PS++Q Q++SG GKTA FVLA L +++
Sbjct: 51 LKPELLRAIVDCGFEHPSEVQHECIPQAILG--MDVLCQAKSGMGKTAVFVLATLQQIEP 108
Query: 553 NKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKI----TDHIL 720
VL + T ELA Q + + +K+ P +K+ G + + ++ H++
Sbjct: 109 VNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVV 168
Query: 721 IGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQMMFFS 900
+GTPG++ V+ F + +K FVLDE D M+ + + I + Q M FS
Sbjct: 169 VGTPGRILAL-VRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFS 227
Query: 901 ATYGTAVMQLLR 936
AT + + R
Sbjct: 228 ATLSKDIRPVCR 239
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 84.6 bits (200), Expect = 5e-15
Identities = 65/198 (32%), Positives = 95/198 (47%), Gaps = 5/198 (2%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L L +LLK + GF PS+IQ Q+Q+GTGKTAAF A +
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEG--HDIIGQAQTGTGKTAAFGCAII 63
Query: 538 SRVD--SNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD 711
+ D K P+ L L+PT ELAIQ E ++ K ++ + G+ + R +
Sbjct: 64 NNADFSGKKKSPKALILAPTRELAIQVNEELVRLGKH-EKLSVLPIYGGQPIDRQIRALK 122
Query: 712 H---ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTC 882
+ I++GTPG++ D ++ + I VLDEAD M+N G I K L +
Sbjct: 123 NGVDIVVGTPGRVLDL-IRRKSLPLNDIGFLVLDEADEMLN-MGFIDDLEEIVKSLKTDR 180
Query: 883 QMMFFSATYGTAVMQLLR 936
Q + FSAT + +L R
Sbjct: 181 QTLLFSATMPPQIKKLAR 198
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 84.6 bits (200), Expect = 5e-15
Identities = 66/198 (33%), Positives = 99/198 (50%), Gaps = 4/198 (2%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
+F + L +L+ + A F P+ IQ Q ++Q+GTGKTAAF L
Sbjct: 9 SFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEG--QDVLGEAQTGTGKTAAFGLPA 66
Query: 535 LSRVDSNKXYPQVLCLSPTYELAIQTGEV----AAKMAKFCPEIKLKYAVRGEELPRGSK 702
L+++D++ QVL ++PT ELAIQ E AAKM A G ++ + K
Sbjct: 67 LAKIDASVKQTQVLVVTPTRELAIQVAEALEGFAAKMRGVGVATVYGGAPFGPQV-KALK 125
Query: 703 ITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTC 882
I++GTPG++ D + + + +KV VLDEAD M+N G I K + +T
Sbjct: 126 QGTAIVVGTPGRLIDL-LNKNVLQLDGLKVGVLDEADEMLN-MGFIEDIETILKAVPNTA 183
Query: 883 QMMFFSATYGTAVMQLLR 936
Q FSAT A+ +L +
Sbjct: 184 QRALFSATMPNAIRKLAK 201
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 84.2 bits (199), Expect = 6e-15
Identities = 62/194 (31%), Positives = 93/194 (47%), Gaps = 3/194 (1%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F AL + P +L + A G+ PS IQ Q+Q+GTGKTAAF L L
Sbjct: 25 FAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAGHDMI--GQAQTGTGKTAAFALPML 82
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL-PRGSKITD- 711
SR+D + PQ+L L+PT ELA+Q A P + + G + P+ +
Sbjct: 83 SRIDPARREPQLLILAPTRELALQVATAFETYASQLPGVGVVAVYGGAPMGPQLKALRQG 142
Query: 712 -HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQM 888
IL+ TPG++ D ++ + +K VLDEAD M+ + G I L + Q
Sbjct: 143 AQILVATPGRLCD-HLRRDEQLLSTVKHLVLDEADEML-KLGFMEDLEVIFAALPESRQT 200
Query: 889 MFFSATYGTAVMQL 930
+ FSAT ++ ++
Sbjct: 201 VLFSATLPHSIREI 214
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 83.8 bits (198), Expect = 8e-15
Identities = 62/204 (30%), Positives = 96/204 (47%), Gaps = 2/204 (0%)
Frame = +1
Query: 325 APXSPLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGT 504
AP +P+ +F +L +L+ + GF P+ IQ Q+Q+GT
Sbjct: 46 APVAPVAPAVSFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAG--SDLIGQAQTGT 103
Query: 505 GKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGE-VAAKMAKFCPEIKLKYAVRGE 681
GKTAAF L L+ +D +K Q L L+PT ELA Q G+ +A + + Y
Sbjct: 104 GKTAAFGLPLLNNIDFSKKCVQALVLAPTRELAQQVGDALATYSGDDGRNVLVVYGGSSY 163
Query: 682 ELPRGS-KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRI 858
+ G + +++GTPG++ D ++ G + ++K VLDEAD M++ G I
Sbjct: 164 QAQVGGLRRGARVVVGTPGRLLDL-IRQGSLKLDQLKTLVLDEADEMLS-MGFIDDIETI 221
Query: 859 HKCLXSTCQMMFFSATYGTAVMQL 930
Q M FSAT + VM +
Sbjct: 222 LSQTPKDRQTMLFSATLSSRVMSI 245
>UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1;
Idiomarina loihiensis|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 474
Score = 83.8 bits (198), Expect = 8e-15
Identities = 60/187 (32%), Positives = 88/187 (47%), Gaps = 3/187 (1%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L+L P LL + G+ + +Q A + G+GKT AF L L
Sbjct: 23 FNQLNLPPALLTRLDEIGYQQMTPVQSLSLPVILNNTDAVVRADT--GSGKTTAFALTLL 80
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD-- 711
+++++ PQ L L PT ELA Q + K+AK IK+ GE + +
Sbjct: 81 AKLEAKSFSPQALVLCPTRELAHQVADEVRKLAKSMLNIKILTLCGGEPSRIQTNSLEHG 140
Query: 712 -HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQM 888
H+L+GTPG++ D ++ D+ + VLDEAD M+ G Q I K + T Q
Sbjct: 141 AHVLVGTPGRVLD-HLEQRNVDLSMLTTLVLDEADRML-EMGFQDSLNAIVKHIPKTRQT 198
Query: 889 MFFSATY 909
+ FSATY
Sbjct: 199 LLFSATY 205
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 83.8 bits (198), Expect = 8e-15
Identities = 62/200 (31%), Positives = 94/200 (47%), Gaps = 3/200 (1%)
Frame = +1
Query: 346 SVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFV 525
S F L L +L + + G+ PS IQ + Q+Q+GTGKTAAFV
Sbjct: 10 SPSKFERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNN--KDIIGQAQTGTGKTAAFV 67
Query: 526 LAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP---RG 696
L L +++ N PQ+L L+PT ELAIQ E A+ + G+ R
Sbjct: 68 LPLLDKINLNINAPQLLILAPTRELAIQVSEAVQTYARGMKGFHVLPIYGGQSYDIQLRP 127
Query: 697 SKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXS 876
K H ++GTPG++ D ++ + +K FVLDEAD M+ + G I + +
Sbjct: 128 LKRGVHAIVGTPGRVMD-HIEKKTLKLDNLKSFVLDEADEML-KMGFIDDIKWIMQRIPE 185
Query: 877 TCQMMFFSATYGTAVMQLLR 936
Q+ FSAT + ++ +
Sbjct: 186 QRQIALFSATMPNVIKKIAK 205
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 83.4 bits (197), Expect = 1e-14
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 3/196 (1%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F +L P +LK + F PS+IQ Q A SQ+G+GKTA +
Sbjct: 17 FITFNLDPLILKALDKMNFKEPSRIQTEAIPLIQKK--QDLIALSQTGSGKTATCAIPIC 74
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP-RGSKITD- 711
+RV++ Q L + PT ELA+Q K+ K+ +K GE+ + SK+
Sbjct: 75 NRVNTELTDIQALIIVPTRELALQYATETQKIGKY-KGVKAFAIFGGEDSALQQSKLKHG 133
Query: 712 -HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQM 888
+L+ TPG++ D+ + D+ ++ +LDEAD M++ G + I +CL + Q
Sbjct: 134 VQVLVATPGRLIDF-IYSRQIDLSHVETLILDEADEMLS-MGFYDDLVFIIQCLNHSHQT 191
Query: 889 MFFSATYGTAVMQLLR 936
+ FSAT A+ +L +
Sbjct: 192 LLFSATMPAAIQRLAK 207
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 83.0 bits (196), Expect = 1e-14
Identities = 63/191 (32%), Positives = 94/191 (49%), Gaps = 3/191 (1%)
Frame = +1
Query: 346 SVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFV 525
S K F +L L +L+K V + G+ ++IQ + AQ+++GTGKTAAF
Sbjct: 2 SSKDFASLPLSEDLIKNVASLGYEEMTEIQELSLPAILDG--KDLIAQAKTGTGKTAAFG 59
Query: 526 LAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL-PRGSK 702
L LS++ + QVL L PT EL Q + +A+ P IKL G P+
Sbjct: 60 LGVLSKLVLDDYRIQVLILCPTRELCEQVSKAIRDLARMMPNIKLLSLGGGMPFRPQMKS 119
Query: 703 ITD--HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXS 876
+ HI++GTPG++ K + + ++ VLDEAD M++ G Q + I
Sbjct: 120 VAHGAHIVVGTPGRILKHLNKSSL-SLDHVRTLVLDEADRMLD-MGFQDEIDAIIDQTNK 177
Query: 877 TCQMMFFSATY 909
Q + FSATY
Sbjct: 178 QRQTLLFSATY 188
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 83.0 bits (196), Expect = 1e-14
Identities = 51/155 (32%), Positives = 85/155 (54%), Gaps = 5/155 (3%)
Frame = +1
Query: 487 QSQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKY 666
++Q+GTGKTAAF + L +++ + PQ L + PT EL +Q E ++ K+ ++K+
Sbjct: 47 EAQTGTGKTAAFAIPVLENLEAER-VPQALIICPTRELCLQVSEEIKRIGKYM-KVKVLA 104
Query: 667 AVRGEELPRGSKITD-----HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQ 831
G+ + G++I H+++ TPG++ D ++ G D+G I VLDEAD M+N
Sbjct: 105 VYGGQSI--GNQIAQLRRGVHVIVATPGRLID-HIERGTVDLGGISTVVLDEADEMLN-M 160
Query: 832 GHQXQCIRIHKCLXSTCQMMFFSATYGTAVMQLLR 936
G RI + Q M FSAT ++++ R
Sbjct: 161 GFIDDIERILSHVPERRQTMLFSATVSKPILRIAR 195
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 82.2 bits (194), Expect = 2e-14
Identities = 60/189 (31%), Positives = 93/189 (49%), Gaps = 4/189 (2%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
+F +L L ++ +G+ GF PS IQ +S+SGTGKT F
Sbjct: 25 SFASLLLPDDIKQGLSVSGFKKPSPIQFKAIPLGRCGFD--LIVKSKSGTGKTLVFSTIA 82
Query: 535 LSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG----EELPRGSK 702
L V++ K + QVL L PT E+A+Q +V + +K++ + G ++L + SK
Sbjct: 83 LETVNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVNGLKIESFIGGRPLEDDLKKSSK 142
Query: 703 ITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTC 882
HI +G PG++ +K G +K+FVLDEAD ++ + Q I+ L
Sbjct: 143 C--HIAVGAPGRVKHL-LKMGALTTNLVKLFVLDEADKLM-EESFQSDINEIYNSLPPRK 198
Query: 883 QMMFFSATY 909
QM+ SATY
Sbjct: 199 QMIVSSATY 207
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 81.8 bits (193), Expect = 3e-14
Identities = 63/187 (33%), Positives = 93/187 (49%), Gaps = 5/187 (2%)
Frame = +1
Query: 385 LLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXLSRVDSNKXY 564
LLK + G+ PS IQ + Q+Q+GTGKTAAF L L R++S +
Sbjct: 82 LLKTLADKGYSDPSPIQKAAFPELMLG--RDLVGQAQTGTGKTAAFALPLLERLESGQKT 139
Query: 565 PQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD-----HILIGT 729
PQVL L+PT ELA+Q + A P +K+ G + S+I+ +++GT
Sbjct: 140 PQVLVLAPTRELAMQVADSFKAYAAGHPHLKVLAVYGGTDF--RSQISTLRRGVDVVVGT 197
Query: 730 PGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQMMFFSATY 909
PG++ D ++ G D + VLDEAD M+ R G I + L Q++ FSAT
Sbjct: 198 PGRVMD-HMRQGTLDTSGLTSLVLDEADEML-RMGFIDDVEWILEQLPKERQVVLFSATM 255
Query: 910 GTAVMQL 930
+ +L
Sbjct: 256 PPEIRRL 262
>UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp10 -
Emericella nidulans (Aspergillus nidulans)
Length = 936
Score = 81.8 bits (193), Expect = 3e-14
Identities = 64/198 (32%), Positives = 97/198 (48%), Gaps = 5/198 (2%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F A+ L NLLK + GF P+ IQ Q +++G+GKTAAFV+ +
Sbjct: 93 FQAMGLNANLLKAIARKGFSVPTPIQRKTIPVIMED--QDVVGMARTGSGKTAAFVIPMI 150
Query: 538 SRVDSN--KXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKI-- 705
++ S+ K + L LSP+ ELA+QT +V ++ K ++K V G+ L +
Sbjct: 151 EKLKSHSTKFGARGLILSPSRELALQTLKVVKELGK-GTDLKSVLLVGGDSLEEQFGMMA 209
Query: 706 -TDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTC 882
I+I TPG+ V+ + D+ IK V DEAD + G Q I L ST
Sbjct: 210 GNPDIVIATPGRFLHLKVEMNL-DLSSIKYVVFDEADRLF-EMGFAAQLTEILHGLPSTR 267
Query: 883 QMMFFSATYGTAVMQLLR 936
Q + FSAT ++++ R
Sbjct: 268 QTLLFSATLPKSLVEFAR 285
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 81.4 bits (192), Expect = 4e-14
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 3/200 (1%)
Frame = +1
Query: 346 SVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFV 525
S F L L P LL V GF + IQ + Q+++G+GKTAAF
Sbjct: 45 SQNEFSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAG--KDIIGQAKTGSGKTAAFS 102
Query: 526 LAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKI 705
L L++++ ++ Q L L PT ELA Q K+ + P +K+ G+ +
Sbjct: 103 LPILNKINLDQPLLQALILCPTRELASQVVTEIRKLGRRLPGLKVLAMTGGQSGREQADA 162
Query: 706 TDH---ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXS 876
++ I++GTPG++ D+ V D+ +K VLDEAD M++ G + + + L
Sbjct: 163 LENGVQIVVGTPGRLADF-VGRNRIDLSAVKTVVLDEADKMLD-MGFADEIKTVMRDLPG 220
Query: 877 TCQMMFFSATYGTAVMQLLR 936
+ Q + FSAT+ ++ L R
Sbjct: 221 SRQTVLFSATFPESIEHLSR 240
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 81.4 bits (192), Expect = 4e-14
Identities = 67/199 (33%), Positives = 97/199 (48%), Gaps = 6/199 (3%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF L L ++LK + G+ PS IQ AQ+ GTGKT AF
Sbjct: 2 TFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQT--GTGKTCAFAAPI 59
Query: 535 LSRV--DSNKXYP-QVLCLSPTYELAIQTGEVAAKMAKFCP-EIKLKYAVRGEELPRGSK 702
L R+ D P + L L+PT ELA+Q E K P + + G++ P+ K
Sbjct: 60 LQRLGGDIPAGRPIRSLILTPTRELALQIQESFEAYGKHLPLRSAVIFGGVGQQ-PQVDK 118
Query: 703 ITD--HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXS 876
+ IL+ TPG++ D + G D+ ++++FVLDEAD M++ G R+ K L +
Sbjct: 119 LKKGVDILVATPGRLLDLQGQ-GFVDLSRLEIFVLDEADRMLD-MGFLHDVRRVLKLLPA 176
Query: 877 TCQMMFFSATYGTAVMQLL 933
Q +FFSAT VM L+
Sbjct: 177 VKQTLFFSATMPPEVMDLV 195
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 81.4 bits (192), Expect = 4e-14
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 4/192 (2%)
Frame = +1
Query: 373 LXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXLSRVDS 552
L P LL+ + GF PS++Q Q++SG GKTA FVLA L +++
Sbjct: 52 LKPELLRAIVDCGFEHPSEVQHECIPQAILG--MDVLCQAKSGMGKTAVFVLATLQQLEP 109
Query: 553 NKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKI----TDHIL 720
VL + T ELA Q + + +K+ P +K+ G + + ++ HI+
Sbjct: 110 VTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIV 169
Query: 721 IGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQMMFFS 900
+GTPG++ + ++ IK F+LDE D M+ + + I + Q+M FS
Sbjct: 170 VGTPGRILAL-ARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFS 228
Query: 901 ATYGTAVMQLLR 936
AT + + R
Sbjct: 229 ATLSKEIRPVCR 240
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 81.0 bits (191), Expect = 6e-14
Identities = 55/193 (28%), Positives = 93/193 (48%), Gaps = 2/193 (1%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L+L P L + + G+ ++IQ Q +S +GTGKT AF++ L
Sbjct: 3 FNTLNLYPALQRMIAKMGYTNLTEIQEKAIPVALNS--QDIIGKSHTGTGKTVAFIVPIL 60
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRG--SKITD 711
++++ PQ + L PT+ELA Q E K A + + G + R +
Sbjct: 61 QNLNTHLKQPQAIILCPTHELASQIIEQVRKFATYLEGVNATLICGGSHIQRQIYALRKS 120
Query: 712 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQMM 891
+I++GTPG++ D + + KIK VLDEAD M+ + G + ++ + + Q +
Sbjct: 121 NIIVGTPGRIAD-HINRKTLRLDKIKTIVLDEADEML-KMGFKTDLDKVFQNAPNKYQTL 178
Query: 892 FFSATYGTAVMQL 930
FSAT V+++
Sbjct: 179 LFSATMPKQVLEI 191
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 81.0 bits (191), Expect = 6e-14
Identities = 67/202 (33%), Positives = 99/202 (49%), Gaps = 6/202 (2%)
Frame = +1
Query: 349 VKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVL 528
+ +F + L +L+G+ + GF P+ IQ A + G+GKTAAFV+
Sbjct: 275 LSSFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVT--GSGKTAAFVV 332
Query: 529 AXLSRVDSN-KXYP--QVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP--R 693
L R+ K P +V+ L+PT ELAIQ VA K+A +IK AV G L
Sbjct: 333 PILERLLYRPKKVPTTRVVVLTPTRELAIQCHSVATKLASHT-DIKFCLAVGGLSLKVQE 391
Query: 694 GS-KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCL 870
G ++ ++I TPG+ D F + +++ VLDEAD M+ G + I L
Sbjct: 392 GELRLRPDVVIATPGRFIDHMRNSASFAVETVEILVLDEADRML-EDGFADELNEILTTL 450
Query: 871 XSTCQMMFFSATYGTAVMQLLR 936
+ Q M FSAT + V +L+R
Sbjct: 451 PKSRQTMLFSATMTSTVDKLIR 472
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 80.6 bits (190), Expect = 8e-14
Identities = 59/196 (30%), Positives = 92/196 (46%), Gaps = 3/196 (1%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L+L + + GF S IQ + +Q+GTGKTAAF + +
Sbjct: 11 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKG--KDIIGHAQTGTGKTAAFAIPTI 68
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP---RGSKIT 708
++ + Q L L PT EL IQ E K+ K+ ++ G+E+ R +
Sbjct: 69 ELLEVESKHLQALILCPTRELVIQVSEQFRKLIKYKGNFEVVPIYGGQEIERQLRALRKN 128
Query: 709 DHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQM 888
I+I TPG+M D ++ G + +IK+ VLDEAD M++ G + I K + Q
Sbjct: 129 PQIVIATPGRMMD-HMRRGSIHLDEIKIVVLDEADEMLD-MGFREDMEFILKDTPADRQT 186
Query: 889 MFFSATYGTAVMQLLR 936
+ FSAT V+ L++
Sbjct: 187 IMFSATMTDDVLTLMK 202
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 80.6 bits (190), Expect = 8e-14
Identities = 60/186 (32%), Positives = 92/186 (49%), Gaps = 3/186 (1%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L +LKG+ GF PS +Q + AQ+Q+GTGKTAAF + L
Sbjct: 47 FDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQG--KDLIAQAQTGTGKTAAFAIPIL 104
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD-- 711
+ ++ NK + L ++PT ELA+Q E K+ +F IK G+ + R + +
Sbjct: 105 NTLNRNKDI-EALIITPTRELAMQISEEILKLGRF-GRIKTICMYGGQSIKRQCDLLEKK 162
Query: 712 -HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQM 888
+I TPG++ D ++ G ++ VLDE+D M++ G I K L +T Q
Sbjct: 163 PKAMIATPGRLLD-HLQNGRIAHFSPQIVVLDESDEMLD-MGFLDDIEEIFKFLPNTRQT 220
Query: 889 MFFSAT 906
+ FSAT
Sbjct: 221 LLFSAT 226
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 80.6 bits (190), Expect = 8e-14
Identities = 55/194 (28%), Positives = 90/194 (46%), Gaps = 5/194 (2%)
Frame = +1
Query: 343 YSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAF 522
Y+V F L LL+ V GF P+++Q + Q+++GTGKTA F
Sbjct: 70 YNVSQFKNFGLKEELLRAVKEAGFEHPTRVQAESLTNALLG--EQLICQAKAGTGKTAVF 127
Query: 523 VLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEE-----L 687
VL L+ +++ + L ++ T ELA Q + ++ KF +K++ G E +
Sbjct: 128 VLTVLNTINTESNKVECLVITHTRELAQQARDEFLRLGKFMKSVKVECFYGGGEPVSVNI 187
Query: 688 PRGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKC 867
+ I++GTPG++ D + + ++K F+LDEAD MI + I
Sbjct: 188 QTIETVKPQIVVGTPGRLKDLICERKALKVDRLKYFILDEADTMIEDLNMRKDIQDIFLK 247
Query: 868 LXSTCQMMFFSATY 909
Q M FSAT+
Sbjct: 248 SPQEKQFMAFSATF 261
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 80.6 bits (190), Expect = 8e-14
Identities = 63/186 (33%), Positives = 93/186 (50%), Gaps = 7/186 (3%)
Frame = +1
Query: 373 LXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXLSRVDS 552
L +LLKG+ + GF PS IQ + AQ+QSGTGKT AF +A L D
Sbjct: 45 LKEDLLKGIYSIGFETPSFIQKAAIQPIIDG--RDIRAQAQSGTGKTGAFAVAALQICDM 102
Query: 553 NKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP-RGSKIT----DHI 717
++ Q+L L+ T E+A Q AA+ + + A+ P K+ HI
Sbjct: 103 SQDVTQILVLASTREIAAQN---AARFEDLGCFMGARVALLSGGSPIAADKVALEKKPHI 159
Query: 718 LIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXS--TCQMM 891
++GTPG++ + + M IK+FV+DEAD M+ + G Q Q I + + + Q+
Sbjct: 160 VVGTPGRV-EHMININELSMDNIKLFVIDEADEML-KAGFQEQVKSIFRRITNKDEVQIA 217
Query: 892 FFSATY 909
FSATY
Sbjct: 218 MFSATY 223
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 80.6 bits (190), Expect = 8e-14
Identities = 67/202 (33%), Positives = 99/202 (49%), Gaps = 6/202 (2%)
Frame = +1
Query: 349 VKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVL 528
+ +F + L +L+G+ + GF P+ IQ A + G+GKTAAFV+
Sbjct: 292 MSSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVT--GSGKTAAFVV 349
Query: 529 AXLSRVDSN-KXYP--QVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGS 699
L R+ K P +V+ L+PT ELAIQ VA K+A +IK AV G L
Sbjct: 350 PILERLLYRPKKVPTTRVVILTPTRELAIQCHAVAVKLASHT-DIKFCLAVGGLSLKVQE 408
Query: 700 ---KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCL 870
++ ++I TPG+ D F + I++ VLDEAD M+ G + I L
Sbjct: 409 AELRLRPDVVIATPGRFIDHMRNSASFAVDTIEILVLDEADRML-EDGFADELNEILTTL 467
Query: 871 XSTCQMMFFSATYGTAVMQLLR 936
+ Q M FSAT ++V +L+R
Sbjct: 468 PKSRQTMLFSATMTSSVDRLIR 489
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 80.2 bits (189), Expect = 1e-13
Identities = 60/193 (31%), Positives = 94/193 (48%), Gaps = 2/193 (1%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F +++ +LK + GF P+KIQ + Q+Q+GTGKTAAF + L
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEG--KDIIGQAQTGTGKTAAFAIPIL 60
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKF-CPEIKLKY-AVRGEELPRGSKITD 711
S +D + Q L ++PT ELA Q + + K+ C +I L V E+
Sbjct: 61 SNLDCSINRIQHLVIAPTRELANQIYDQLNILGKYTCSKIALILGGVSYEKQKAALNSGV 120
Query: 712 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQMM 891
+I++ TPG++ D + D+ IK F LDEAD ++ + G + I+I L Q
Sbjct: 121 NIVVATPGRLEDL-LAQNKIDLSHIKTFTLDEADELL-KIGFYNEIIKIMNKLPKKRQNF 178
Query: 892 FFSATYGTAVMQL 930
FF+AT+ +L
Sbjct: 179 FFTATFDEKTKKL 191
>UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=20; Bacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 436
Score = 80.2 bits (189), Expect = 1e-13
Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 6/191 (3%)
Frame = +1
Query: 352 KTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLA 531
+TF P L+ V F P+ IQ QSQ+G+GKT A++L
Sbjct: 4 QTFTQYDFKPFLIDAVRELRFTEPTGIQQKIFPVVKKGVS--VIGQSQTGSGKTHAYLLP 61
Query: 532 XLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPE---IKLKYAVRGEELPRG-- 696
L+R++ + Q++ +PT ELA Q E K+ KFC E I + + G + R
Sbjct: 62 TLNRINPGREEVQLVITAPTRELAQQIYEEIVKLTKFCAEDQMITARCLIGGTDKQRSIE 121
Query: 697 -SKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLX 873
K HI++GTPG++ D + +F + K ++DEAD+M++ G +I +
Sbjct: 122 KLKKQPHIVVGTPGRIKDLVEEQALF-VHKANTIIVDEADLMLD-MGFIHDVDKIAARMP 179
Query: 874 STCQMMFFSAT 906
QM+ FSAT
Sbjct: 180 KNLQMLVFSAT 190
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 80.2 bits (189), Expect = 1e-13
Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 3/143 (2%)
Frame = +1
Query: 487 QSQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKY 666
Q+Q+GTGKT AF + + +++ Q L L PT EL +Q E K+ +F EI++
Sbjct: 46 QAQTGTGKTFAFGIPIIEKIEPKIQKTQSLILCPTRELTLQVYEELKKLLRFYQEIRIAV 105
Query: 667 AVRGEELP---RGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGH 837
GE R + H++I TPG+ D ++ G D+ +K+ LDEAD M+ + G
Sbjct: 106 VYGGESYTKQFRALEAKPHLIIATPGRAID-HLERGKIDLSALKILTLDEADEML-KMGF 163
Query: 838 QXQCIRIHKCLXSTCQMMFFSAT 906
Q I K + Q + FSAT
Sbjct: 164 QEALETILKKIPEERQTVLFSAT 186
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 80.2 bits (189), Expect = 1e-13
Identities = 61/197 (30%), Positives = 88/197 (44%), Gaps = 3/197 (1%)
Frame = +1
Query: 349 VKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVL 528
+ F + L K + F PS IQ + A +Q+GTGKTAAF L
Sbjct: 5 ISNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQG--RDAIALAQTGTGKTAAFAL 62
Query: 529 AXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSK-- 702
L + Q L L+PT ELAIQ E ++K+ + + G+E R K
Sbjct: 63 PILQNLSPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLKQL 122
Query: 703 -ITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXST 879
+++GTPG++ D + G + +K F+LDEAD M+ R G I + L
Sbjct: 123 RSGAQVVVGTPGRILD-HIDKGTLLLNNLKTFILDEADEML-RMGFIEDVETILEKLPEK 180
Query: 880 CQMMFFSATYGTAVMQL 930
QM FSAT + Q+
Sbjct: 181 KQMALFSATMPYRIRQI 197
>UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS; n=1; Encephalitozoon
cuniculi|Rep: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS - Encephalitozoon cuniculi
Length = 425
Score = 80.2 bits (189), Expect = 1e-13
Identities = 61/192 (31%), Positives = 95/192 (49%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F + L LLK + GF PS IQ QS+SGTGKT A+ L
Sbjct: 53 FSDMGLSDELLKAIYNQGFEKPSLIQKSAIPHILRG--HNVVVQSKSGTGKTIAYTCGVL 110
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITDHI 717
+ QV+ ++PT EL+ Q EV + +A IK+ A++ + I + +
Sbjct: 111 GNTKIGER-TQVMVVTPTRELSTQVTEVISGLAGPLG-IKVFSALKNKIT---DSIGEEV 165
Query: 718 LIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQMMFF 897
++G+PG + ++ G + +K+ VLDEAD+++++ Q RI K L S QM+FF
Sbjct: 166 VVGSPGTILKL-MELGKLNYKGVKMIVLDEADILLDKDMMGTQTFRILK-LISGAQMIFF 223
Query: 898 SATYGTAVMQLL 933
SAT+ V Q +
Sbjct: 224 SATFSEQVKQTI 235
>UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqfR;
n=12; Bacillaceae|Rep: Probable ATP-dependent RNA
helicase yqfR - Bacillus subtilis
Length = 438
Score = 80.2 bits (189), Expect = 1e-13
Identities = 59/188 (31%), Positives = 93/188 (49%), Gaps = 5/188 (2%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L P ++ V GF P+ IQ + QSQ+GTGKT A++L L
Sbjct: 6 FELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKK--ESVIGQSQTGTGKTHAYLLPLL 63
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKM--AKFCPEIKLKYAVRGEELPRG---SK 702
+++D K QV+ +PT ELA Q + A K+ + +I+ K + G + + K
Sbjct: 64 NKIDPAKDVVQVVITAPTRELANQIYQEALKITQGEEGSQIRSKCFIGGTDKQKSIDKLK 123
Query: 703 ITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTC 882
I H+++GTPG++ D +K + K + V+DEAD+M++ G I +
Sbjct: 124 IQPHLVVGTPGRIADL-IKEQALSVHKAESLVIDEADLMLD-MGFLADVDYIGSRMPEDL 181
Query: 883 QMMFFSAT 906
QM+ FSAT
Sbjct: 182 QMLVFSAT 189
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 80.2 bits (189), Expect = 1e-13
Identities = 66/198 (33%), Positives = 90/198 (45%), Gaps = 6/198 (3%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
+F ++L LLK + A GF P+ IQ + A + +GTGKTAAF L
Sbjct: 219 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLG--KDICACAATGTGKTAAFALPV 276
Query: 535 LSRV---DSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGS-- 699
L R+ +VL L PT EL IQ V ++A+FC I AV G ++
Sbjct: 277 LERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFC-NITTCLAVGGLDVKSQEAA 335
Query: 700 -KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXS 876
+ ILI TPG++ D F + I+V +LDEAD M++ + I C
Sbjct: 336 LRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHH 395
Query: 877 TCQMMFFSATYGTAVMQL 930
Q M FSAT V L
Sbjct: 396 R-QTMLFSATMTDEVKDL 412
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 79.8 bits (188), Expect = 1e-13
Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 3/196 (1%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L L P +++ + + G+ + IQ + Q+Q+GTGKTAAF + +
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTG--KDLTGQAQTGTGKTAAFGIPAI 60
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP---RGSKIT 708
VD + Q L L PT ELA+Q K++KF +++ GE + R K
Sbjct: 61 EHVDISINQTQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESIERQIRDLKAG 120
Query: 709 DHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQM 888
HI++GTPG++ D + + + +LDEAD M+N G + I L Q
Sbjct: 121 AHIVVGTPGRIID-HLDRRTLNASHLSQIILDEADEMLN-MGFREDIELILTRLPEERQT 178
Query: 889 MFFSATYGTAVMQLLR 936
+ FSAT ++ L +
Sbjct: 179 VLFSATLAPPILALAK 194
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 79.8 bits (188), Expect = 1e-13
Identities = 57/191 (29%), Positives = 91/191 (47%), Gaps = 3/191 (1%)
Frame = +1
Query: 346 SVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFV 525
+V+T L + P + K + + G S IQ + Q+Q+G+GKT FV
Sbjct: 2 TVETVKQLDINPAITKALDSQGIHQLSPIQAQSLPDALQG--KDVIGQAQTGSGKTLCFV 59
Query: 526 LAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP---RG 696
+ L +++ N Q + L PT ELA Q + AK IK+ G+ + +
Sbjct: 60 IPALEKIEVNDFSTQAIMLCPTRELAEQVAQQCRSAAKDIGNIKVTTLCGGQPMGPQIQS 119
Query: 697 SKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXS 876
K + HI++GTPG++ D V+ D+ +K+ VLDEAD M++ G + I
Sbjct: 120 LKHSPHIIVGTPGRVMD-HVEKRRIDLRNVKLRVLDEADRMLD-MGFEDDLRIIFGQTPK 177
Query: 877 TCQMMFFSATY 909
Q + FSAT+
Sbjct: 178 QVQTLLFSATF 188
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 79.8 bits (188), Expect = 1e-13
Identities = 59/199 (29%), Positives = 95/199 (47%), Gaps = 3/199 (1%)
Frame = +1
Query: 349 VKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVL 528
+++F L L +L+ + GF P+ IQ + Q+Q+GTGKTAAF +
Sbjct: 1 MESFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGK-RDIVGQAQTGTGKTAAFGI 59
Query: 529 AXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKIT 708
L +D + Q L L+PT ELAIQ E + K + + G+ + R +
Sbjct: 60 PILETIDESSRNTQALILAPTRELAIQVAEEIDSI-KGSKRLNVFPVYGGQSIDRQIREL 118
Query: 709 D---HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXST 879
I++GTPG++ D + + + VLDEAD M+N G I K + +
Sbjct: 119 RRGVQIVVGTPGRILD-HISRRTIKLENVSYVVLDEADEMLN-MGFIDDVEEILKSVSTE 176
Query: 880 CQMMFFSATYGTAVMQLLR 936
+M+ FSAT ++M+L +
Sbjct: 177 KRMLLFSATLPDSIMKLAK 195
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 79.4 bits (187), Expect = 2e-13
Identities = 64/198 (32%), Positives = 96/198 (48%), Gaps = 5/198 (2%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
+F L + ++ + GF AP+ IQ + QSQ+GTGKTAAF L
Sbjct: 4 SFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSG--RDVVGQSQTGTGKTAAFSLPI 61
Query: 535 LSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAV--RGEELPRGS--- 699
L R+D + Q + L+PT ELAIQ + MA+F L+ G+ + R
Sbjct: 62 LERLDPQQKAVQAIVLTPTRELAIQVHDA---MAQFVGNSGLRTLAIYGGQSIDRQMLQL 118
Query: 700 KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXST 879
K HI++GTPG++ D ++ G + ++K FVLDEAD M++ G +I
Sbjct: 119 KRGVHIVVGTPGRVIDL-LERGNLKLDQVKWFVLDEADEMLS-MGFIDDVEKILSQAPQD 176
Query: 880 CQMMFFSATYGTAVMQLL 933
Q FSAT ++ L+
Sbjct: 177 RQTALFSATMPPSIRMLV 194
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 79.4 bits (187), Expect = 2e-13
Identities = 60/199 (30%), Positives = 96/199 (48%), Gaps = 8/199 (4%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L+L +L G+ A F + +Q + A +Q+GTGKTAA++L L
Sbjct: 3 FDELNLGDEVLDGLDAMNFIETTPVQAATIPPILEG--RDVIACAQTGTGKTAAYLLPIL 60
Query: 538 SRVDSNKXYPQV---LCLSPTYELAIQTGEVAAKMAKFCPEIKLKY-----AVRGEELPR 693
R+ + + V + ++PT ELA Q + + F P + V E+ R
Sbjct: 61 DRLSAGEFASDVVNAVIMAPTRELAQQIDQQVEGFSYFMPVSAVAIYGGTDGVAWEQQRR 120
Query: 694 GSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLX 873
G + I+I TPG++ + G D+ + FVLDEAD M++ G ++I+K L
Sbjct: 121 GMAMGADIVIATPGRLIS-HLNLGSADLSHVSYFVLDEADRMLD-MGFFDDIMQIYKQLP 178
Query: 874 STCQMMFFSATYGTAVMQL 930
S+CQ + FSAT + +L
Sbjct: 179 SSCQTVMFSATMPPKIRKL 197
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 79.4 bits (187), Expect = 2e-13
Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 3/197 (1%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF L L LL+ + +PS+IQ +Q+GTGKTAAF L
Sbjct: 2 TFSDLGLNAALLQSLSENNISSPSEIQQKAIPVILNSTKNVVGV-AQTGTGKTAAFGLPV 60
Query: 535 LSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD- 711
L +++ + QVL L PT EL Q + +++ I + G+++ K +
Sbjct: 61 LQQINPSLQQTQVLVLVPTRELGQQVAKDLFVFSRYIVRIHTEAVYGGKKIEEQIKKLET 120
Query: 712 --HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQ 885
HIL+ TPG++ D + + ++ +K +LDEAD M+N G +I K T +
Sbjct: 121 PKHILVATPGRLLDLIARKAV-NLSNLKYLILDEADEMLN-MGFLPDIDKIMKIAKPTAR 178
Query: 886 MMFFSATYGTAVMQLLR 936
+ F++T G+ + ++R
Sbjct: 179 KLLFTSTLGSELKLIIR 195
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 79.4 bits (187), Expect = 2e-13
Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 5/197 (2%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F +L L +L+G+ A GF PS IQ Q++SGTGKT F L
Sbjct: 28 FSSLLLSKPVLEGLSASGFQRPSPIQLKAIPLGRCGLD--LIVQAKSGTGKTCVFTTIAL 85
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD-- 711
+ QVL L+PT E+A+Q V + ++ + G + + +
Sbjct: 86 DSLILENATTQVLVLAPTREIAVQIHAVVMAIGSAMEGLECHVFIGGRPISQDKQHLKKC 145
Query: 712 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMI---NRQGHQXQCIRIHKCLXSTC 882
HI IG+PG++ ++ G + I++FVLDEAD ++ + Q Q I+ L +
Sbjct: 146 HIAIGSPGRIKQL-IEMGALMVSSIRLFVLDEADKLLEDDSSSSFQEQINWIYSSLPANK 204
Query: 883 QMMFFSATYGTAVMQLL 933
QM+ SATY ++ Q L
Sbjct: 205 QMLALSATYPESLAQQL 221
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 79.0 bits (186), Expect = 2e-13
Identities = 59/187 (31%), Positives = 89/187 (47%), Gaps = 2/187 (1%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF + L +L G+ GF PS IQ +++SGTGKTA F +
Sbjct: 25 TFSQMGLSQQVLNGLLNCGFHKPSPIQHKSIPLGRCGFD--LIVRAKSGTGKTAVFGIIA 82
Query: 535 LSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG--EELPRGSKIT 708
L +D QV+ L+PT E+AIQ EV A + +K++ + G ++ R
Sbjct: 83 LEMIDIKISSVQVIILAPTREIAIQIKEVIASLGCEIKGLKVESFIGGVAMDIDRKKLSN 142
Query: 709 DHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQM 888
HI IG PG++ + G M +++FVLDEAD ++ + Q I+ L Q+
Sbjct: 143 CHIAIGAPGRVKHL-IDKGYLKMDHVRLFVLDEADKLM-EESFQKDINYIYAKLPPNRQV 200
Query: 889 MFFSATY 909
+ SATY
Sbjct: 201 ISSSATY 207
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 79.0 bits (186), Expect = 2e-13
Identities = 60/195 (30%), Positives = 94/195 (48%), Gaps = 3/195 (1%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF L L +LK + GF PS IQ + Q+Q+GTGKTAAF +
Sbjct: 7 TFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQG--KDVIGQAQTGTGKTAAFGVPI 64
Query: 535 LSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP---RGSKI 705
+ R+ + Q L L+PT ELAIQ E K+ + +K G+ + R +
Sbjct: 65 VERLVPGQRAVQALVLTPTRELAIQVAEEITKIGRHA-RVKTIAIYGGQSIERQIRSLRF 123
Query: 706 TDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQ 885
++IGTPG++ D + D+ ++++ VLDEAD M++ G +I + + Q
Sbjct: 124 GVDVVIGTPGRILD-HLGRSTLDLSQVRMVVLDEADEMLD-MGFIEDIEKILQNTPAERQ 181
Query: 886 MMFFSATYGTAVMQL 930
+ FSAT + +L
Sbjct: 182 TLLFSATMPPEIRRL 196
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 79.0 bits (186), Expect = 2e-13
Identities = 61/186 (32%), Positives = 85/186 (45%), Gaps = 3/186 (1%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F +L L NLL+ + G+ PS IQ AQ+ GTGKTAAF L L
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQT--GTGKTAAFTLPLL 65
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP---RGSKIT 708
+R + PQVL L+PT ELA Q +K +K+ G + R K
Sbjct: 66 ARTQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQFRALKQG 125
Query: 709 DHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQM 888
++GTPG++ D ++ G + I+ VLDEAD M+ R G + + Q+
Sbjct: 126 PQWVVGTPGRVMD-HIRRGTLKLEGIRAVVLDEADEML-RMGFIDDVDWVLDQVPEKRQI 183
Query: 889 MFFSAT 906
FSAT
Sbjct: 184 ALFSAT 189
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 79.0 bits (186), Expect = 2e-13
Identities = 62/199 (31%), Positives = 92/199 (46%), Gaps = 5/199 (2%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF +L L +L V GF P+ IQ AQ+ GTGKTAAF L
Sbjct: 46 TFASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGIAQT--GTGKTAAFGLPL 103
Query: 535 LSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKI--- 705
L+ VD+++ Q L L+PT ELA+Q+ + A + + G P G +I
Sbjct: 104 LAIVDADERNVQALVLAPTRELAMQSAQAIEDFAARTARLDVVPVYGGS--PYGPQIGAL 161
Query: 706 --TDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXST 879
+++GTPG++ D ++ G D+ +++ VLDEAD M+ R G I
Sbjct: 162 KRGAQVVVGTPGRVIDL-IEKGALDLSHVRMLVLDEADEML-RMGFAEDVETIASSAPDD 219
Query: 880 CQMMFFSATYGTAVMQLLR 936
FSAT A+ ++ R
Sbjct: 220 RLTALFSATMPAAIEKVAR 238
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 78.6 bits (185), Expect = 3e-13
Identities = 52/152 (34%), Positives = 81/152 (53%), Gaps = 3/152 (1%)
Frame = +1
Query: 487 QSQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKY 666
+S++GTGKTAAF L L ++ +++ + L L PT ELA+Q + +AK +K+
Sbjct: 72 RSKTGTGKTAAFGLPLLEKIPADERRVRALILCPTRELALQVADELKMLAKH-KGLKIAA 130
Query: 667 AVRGEELPRGSKITDH---ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGH 837
G + + + I++GTPG++FD + G + VLDEAD M+N QG
Sbjct: 131 IYGGASMKQQEDALEEGTPIIVGTPGRVFD-HINRGNLKLDACDHAVLDEADEMLN-QGF 188
Query: 838 QXQCIRIHKCLXSTCQMMFFSATYGTAVMQLL 933
+ RI L T Q++ FSAT T + L+
Sbjct: 189 YEEVTRILDRLPKTRQVLLFSATVPTDIQNLI 220
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 78.6 bits (185), Expect = 3e-13
Identities = 58/194 (29%), Positives = 86/194 (44%), Gaps = 3/194 (1%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L L +LL+ + GF P+++Q A +Q+GTGKTAAF +
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLLEKDIDLV-ALAQTGTGKTAAFGFPVI 62
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG---EELPRGSKIT 708
++D+N Q L LSPT EL +Q +K+ I + G E R K
Sbjct: 63 QKIDANNRNTQALILSPTRELCLQITNELKNYSKYEKGINVVAVYGGASITEQARDIKRG 122
Query: 709 DHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQM 888
I++ TPG+M D + + D+ +I +LDEAD M+N G + I
Sbjct: 123 AQIIVATPGRMQDM-INRRLVDISQINYCILDEADEMLN-MGFYEDIVNILSTTPDEKNT 180
Query: 889 MFFSATYGTAVMQL 930
FSAT V ++
Sbjct: 181 WLFSATMPAEVARI 194
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 78.6 bits (185), Expect = 3e-13
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 5/183 (2%)
Frame = +1
Query: 373 LXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXLSRVD- 549
L P +L+ + GF PS++Q Q++SG GKTA FVLA L +++
Sbjct: 48 LKPEILRAIVDCGFEHPSEVQHECIPQAVLG--MDILCQAKSGMGKTAVFVLATLQQLEP 105
Query: 550 SNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKI----TDHI 717
S+ VL + T ELA Q + + +K+ P +K+ G + + + T HI
Sbjct: 106 SDNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGTPHI 165
Query: 718 LIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQMMFF 897
++GTPG++ ++ ++ +K FVLDE D M+ + + I + Q+M F
Sbjct: 166 VVGTPGRILAL-IRNKKLNLKLLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMF 224
Query: 898 SAT 906
SAT
Sbjct: 225 SAT 227
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 78.6 bits (185), Expect = 3e-13
Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 2/195 (1%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L+L N+L + GF P+ IQ AQ+++G+GKTA+F + +
Sbjct: 8 FNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEYNIV-AQARTGSGKTASFAIPLI 66
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL-PRGSKITD- 711
V+ N + + L+PT ELAIQ + + K +K+ G+ + P+ + +
Sbjct: 67 ELVNENNGI-EAIILTPTRELAIQVADEIESL-KGNKNLKIAKIYGGKAIYPQIKALKNA 124
Query: 712 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQMM 891
+I++GTPG++ D + G ++ +K F+LDEAD M+N G +I +++
Sbjct: 125 NIVVGTPGRILD-HINRGTLNLKNVKYFILDEADEMLN-MGFIKDVEKILNACNKDKRIL 182
Query: 892 FFSATYGTAVMQLLR 936
FSAT ++ L +
Sbjct: 183 LFSATMPREILNLAK 197
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 78.6 bits (185), Expect = 3e-13
Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 6/199 (3%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAF--VLA 531
F + ++L+ + G+ P+K+Q + +SQ+G+GKTA+F L
Sbjct: 4 FKNYQISHDILRALEGLGYTEPTKVQQSVIPAALER--KDLVVKSQTGSGKTASFGIPLC 61
Query: 532 XLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG----EELPRGS 699
L+ D NK PQ L L+PT ELA+Q E + +F IK AV G ++
Sbjct: 62 ELANWDENK--PQALILTPTRELAVQVKEDITNIGRF-KRIKAT-AVFGKSSFDKQKAEL 117
Query: 700 KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXST 879
K HI++GTPG++ D ++ G + ++ V+DEAD M+N G Q I K L +
Sbjct: 118 KQKSHIVVGTPGRVLD-HIEKGTLPLDRLSYLVIDEADEMLN-MGFIEQVEAIIKHLPTE 175
Query: 880 CQMMFFSATYGTAVMQLLR 936
M FSAT + +L R
Sbjct: 176 RTTMLFSATLPQDIEKLSR 194
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 78.2 bits (184), Expect = 4e-13
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 2/186 (1%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F +L L +L+G+ A GF PS +Q Q++SGTGKT F L
Sbjct: 65 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLD--LIVQAKSGTGKTCVFSTIAL 122
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD-- 711
+ Q+L L+PT E+A+Q V + ++ + G L +
Sbjct: 123 DSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKKC 182
Query: 712 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQMM 891
HI +G+PG++ ++ + G I++F+LDEAD ++ Q Q I+ L ++ QM+
Sbjct: 183 HIAVGSPGRIKQL-IELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQML 241
Query: 892 FFSATY 909
SATY
Sbjct: 242 AVSATY 247
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 78.2 bits (184), Expect = 4e-13
Identities = 61/189 (32%), Positives = 94/189 (49%), Gaps = 5/189 (2%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF L + +LK + GF P+++Q + S++G+GKTA F ++
Sbjct: 4 TFNELGISAPILKAIDDMGFKTPTEVQSKAIPHILNN--EDLIVMSKTGSGKTAVFGVSI 61
Query: 535 LSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLK-YAVRGE-ELPRGSKIT 708
L + + PQ L L+P ELA+Q KMAK+ +K K A+ G+ + ++I
Sbjct: 62 LQLTNPEEAGPQGLILTPARELAVQVDNDIRKMAKY---LKHKTTAIYGQHNINLETQIL 118
Query: 709 D---HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXST 879
+ I+ GTPG++FD + G I+ VLDEAD M++ G Q +RI K L
Sbjct: 119 NKGVSIVTGTPGRVFD-HISHGTLSTKNIRFLVLDEADRMLD-MGFLDQVVRIVKTLPKE 176
Query: 880 CQMMFFSAT 906
+ FSAT
Sbjct: 177 RITLLFSAT 185
>UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4;
Ascomycota|Rep: 2-isopropylmalate synthase - Ajellomyces
capsulatus NAm1
Length = 1466
Score = 78.2 bits (184), Expect = 4e-13
Identities = 65/213 (30%), Positives = 97/213 (45%), Gaps = 6/213 (2%)
Frame = +1
Query: 316 QRXAPXSPLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQ 495
++ + L S K+F A L +L+G+ + GF P+ IQ A +
Sbjct: 293 EKPSANGDLKSAKSFQAFSLSRPILRGLTSVGFTTPTPIQRKTIPVALLGKDVVGGAVT- 351
Query: 496 SGTGKTAAFVLAXLSRVDSN-KXYP--QVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKY 666
G+GKT AF++ L R+ + P +V L PT ELA+Q VA K+A F +I
Sbjct: 352 -GSGKTGAFIIPILERLLYRPRKVPTSRVAILMPTRELAVQCYNVATKLATFT-DITFCQ 409
Query: 667 AVRGEELPRGSKITDH---ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGH 837
V G L I ++I TPG+ D F + +++ VLDEAD M+ G
Sbjct: 410 LVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRML-EDGF 468
Query: 838 QXQCIRIHKCLXSTCQMMFFSATYGTAVMQLLR 936
+ I + + Q M FSAT V +L+R
Sbjct: 469 ADELNEILTTIPKSRQTMLFSATMTNNVDKLIR 501
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 78.2 bits (184), Expect = 4e-13
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 2/186 (1%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F +L L +L+G+ A GF PS +Q Q++SGTGKT F L
Sbjct: 64 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLD--LIVQAKSGTGKTCVFSTIAL 121
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD-- 711
+ Q+L L+PT E+A+Q V + ++ + G L +
Sbjct: 122 DSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKKC 181
Query: 712 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQMM 891
HI +G+PG++ ++ + G I++F+LDEAD ++ Q Q I+ L ++ QM+
Sbjct: 182 HIAVGSPGRIKQL-IELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQML 240
Query: 892 FFSATY 909
SATY
Sbjct: 241 AVSATY 246
>UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2;
Sordariomycetes|Rep: ATP-dependent RNA helicase DBP10 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 914
Score = 78.2 bits (184), Expect = 4e-13
Identities = 66/226 (29%), Positives = 108/226 (47%), Gaps = 7/226 (3%)
Frame = +1
Query: 280 QGLVASQLALAIQRXAPXSPLYSVKT--FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXX 453
+ L+A Q A + ++ K+ F A+ L P+LL+ + GF P+ IQ
Sbjct: 64 EALIALQQAASFRKTTNLKGKTGKKSGGFQAMGLNPSLLQAITRKGFAVPTPIQRKSIPL 123
Query: 454 XXXXXXQXXXAQSQSGTGKTAAFVLAXLSRV--DSNKXYPQVLCLSPTYELAIQTGEVAA 627
+ +++G+GKTAAFV+ + R+ S + + L +SP+ ELA+QT +V
Sbjct: 124 ILDR--RDVVGMARTGSGKTAAFVIPMIERLRAHSARVGARALIMSPSRELALQTLKVVK 181
Query: 628 KMAKFCPEIKLKYAVRGEELPR--GSKITD-HILIGTPGKMFDWGVKFGMFDMGKIKVFV 798
+ K ++K V G+ L G T+ I+I TPG+ V+ + D+ IK V
Sbjct: 182 EFGK-GTDLKTVLLVGGDSLEDQFGFMTTNPDIIIATPGRFLHLKVEMSL-DLSSIKYVV 239
Query: 799 LDEADVMINRQGHQXQCIRIHKCLXSTCQMMFFSATYGTAVMQLLR 936
DEAD + G Q I L + Q + FSAT ++++ R
Sbjct: 240 FDEADRLF-EMGFATQLTEILHSLPPSRQTLLFSATLPRSLVEFAR 284
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 77.8 bits (183), Expect = 5e-13
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 4/201 (1%)
Frame = +1
Query: 346 SVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFV 525
S K+F L + + + G+ P+++Q + +SQ+G+GKTA+F
Sbjct: 2 SKKSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQK--KDLVVKSQTGSGKTASFG 59
Query: 526 LAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKI 705
+ V+ + PQ L L+PT ELA+Q E + +F IK A+ G+ K+
Sbjct: 60 IPLCEMVEWEENKPQALVLTPTRELAVQVKEDITNIGRF-KRIKAA-AIYGKSPFARQKL 117
Query: 706 ----TDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLX 873
HI++GTPG++ D ++ G + ++K V+DEAD M+N G Q I L
Sbjct: 118 ELKQKTHIVVGTPGRVLD-HIEKGTLSLERLKYLVIDEADEMLN-MGFIDQVEAIIDELP 175
Query: 874 STCQMMFFSATYGTAVMQLLR 936
+ M FSAT V +L R
Sbjct: 176 TKRMTMLFSATLPEDVERLSR 196
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 77.8 bits (183), Expect = 5e-13
Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 6/197 (3%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAF---VL 528
F L L +L + G+ +++Q + A +Q+GTGKTA+F VL
Sbjct: 24 FDTLGLSSPILNAIAECGYLQLTQVQQQVIPLALEG--KDIMACAQTGTGKTASFALPVL 81
Query: 529 AXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL---PRGS 699
LS+ ++K + L ++PT ELAIQ K ++F P +K G + +G
Sbjct: 82 EQLSKQPNDKPLLRALVMTPTRELAIQVCANIQKYSQFLP-LKTLAVYGGANMNPQRKGV 140
Query: 700 KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXST 879
+ IL+ TPG++FD +F + D+ + V+DEAD M++ G ++ + + +
Sbjct: 141 EQGVDILVATPGRLFDIIGQFHL-DLSSVTTLVIDEADRMLD-LGFVRDIEKVKRLIATE 198
Query: 880 CQMMFFSATYGTAVMQL 930
Q M FSATY AV QL
Sbjct: 199 HQTMLFSATYSDAVKQL 215
>UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep:
RNA helicase - Guillardia theta (Cryptomonas phi)
Length = 381
Score = 77.8 bits (183), Expect = 5e-13
Identities = 56/185 (30%), Positives = 94/185 (50%), Gaps = 1/185 (0%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L L +LL G+ G+ PS IQ + A+S++GTGKT +F++ L
Sbjct: 17 FKDLKLKNDLLLGLNDLGYEHPSLIQEKIIPLAINN--KDILARSKNGTGKTLSFLIPIL 74
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITDHI 717
+ S + + L PT ELA+Q + K++K+ I L+ ++ + + I +I
Sbjct: 75 QNIYSESYGIESIILVPTRELALQISSLLRKLSKYMKNINLQVTGVDSKIDK-NNIDFNI 133
Query: 718 LIGTPGKMFDWGVKFGMFDMGK-IKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQMMF 894
L+GTPGK++D K ++ K K VLDEAD +++ + + ++ Q+M
Sbjct: 134 LLGTPGKIYDCLCK---NEVNKTCKTLVLDEADKLLSGEVYDTTLKILNHYKNKISQIML 190
Query: 895 FSATY 909
FSAT+
Sbjct: 191 FSATF 195
>UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2;
Plasmodium chabaudi|Rep: DEAD-box RNA helicase, putative
- Plasmodium chabaudi
Length = 374
Score = 77.8 bits (183), Expect = 5e-13
Identities = 53/157 (33%), Positives = 78/157 (49%)
Frame = +1
Query: 343 YSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAF 522
+S ++ L + L++ + F PSKIQ + AQSQ+G+GKT F
Sbjct: 221 HSKNSWEELKIDNELIQILTYLKFFGPSKIQAYALPIILDSN-RNLIAQSQNGSGKTLTF 279
Query: 523 VLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSK 702
V+A LS+++ Q +C+ PT ELA Q +V K K+ E+ + +
Sbjct: 280 VIAMLSKINRALYSLQAVCICPTRELAQQNYDVVGKFTKYLNVRTFLAVPLCEKYNKSNG 339
Query: 703 ITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEAD 813
I I +GTPGK D+ +K D IK+FVLDEAD
Sbjct: 340 I--QIYVGTPGKTLDF-LKRKYIDTNNIKIFVLDEAD 373
>UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 540
Score = 77.4 bits (182), Expect = 7e-13
Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 4/195 (2%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L + P LL + G+ + IQ + +Q+GTGKT AF++ +
Sbjct: 3 FEELSIHPKLLSAIQEIGYTELTPIQEKSIPHGLEG--KDITGLAQTGTGKTVAFLIPVI 60
Query: 538 SRVDSNKXYP-QVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITDH 714
+ + L L+PT EL +Q E A K+ K I+ + G + +K +
Sbjct: 61 HNILTKGIQGIAALVLAPTRELTMQIAEEAKKLLKHSEGIRSVPIIGGTDYKSQNKDLEG 120
Query: 715 ---ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQ 885
I++ TPG++ D +K G D+ ++ FVLDEAD M++ Q +HKC + Q
Sbjct: 121 LNGIIVATPGRLIDM-IKSGSIDISNVEFFVLDEADRMLDMGFIQDIRWLLHKC-KNRKQ 178
Query: 886 MMFFSATYGTAVMQL 930
+ +SAT VM+L
Sbjct: 179 TLLYSATLSVEVMRL 193
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 77.4 bits (182), Expect = 7e-13
Identities = 65/199 (32%), Positives = 96/199 (48%), Gaps = 7/199 (3%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
+F L + LL + G+ P+ IQ A +Q+GTGKTAAF L
Sbjct: 2 SFEKLGVIKPLLSAIKDLGYEKPTTIQTRAIPLILAK--SDVFATAQTGTGKTAAFGLGM 59
Query: 535 LSRV----DSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSK 702
L R+ D + + L ++PT EL+IQ E AK I + V G++L K
Sbjct: 60 LQRLRKTSDDKQRALRGLVIAPTRELSIQIYEDLQSYAKNM-GINIAVLVGGKDLESQQK 118
Query: 703 ITDH---ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLX 873
I I+I TPG++ + V G+ + +++FVLDEAD M++ G + RIH L
Sbjct: 119 ILKEGVDIVIATPGRVLE-HVDKGL-SLSHVEIFVLDEADRMLD-MGFMKEIRRIHPILP 175
Query: 874 STCQMMFFSATYGTAVMQL 930
Q + FSAT+ V +L
Sbjct: 176 KRHQTLLFSATFSDKVRKL 194
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 77.4 bits (182), Expect = 7e-13
Identities = 62/198 (31%), Positives = 96/198 (48%), Gaps = 7/198 (3%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F + L P + K + GF P+ IQ + A +Q+GTGKTAAFV+ L
Sbjct: 3 FESYDLAPGIKKSLAEAGFNRPTDIQFKSIPPILAG--EDVLAIAQTGTGKTAAFVIPVL 60
Query: 538 SRVDSNK--XYPQVLCL--SPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKI 705
+ + + K + + CL +PT ELA+Q EV K+ + ++ G E
Sbjct: 61 NTLINVKKSEHTDISCLVMAPTRELAVQISEVFKKIGAY-TRLRTVCITGGVEQEAQIAA 119
Query: 706 TDH---ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXS 876
D+ IL+ TPG+MFD + + ++K+ VLDEAD M++ G + K L +
Sbjct: 120 ADYGIDILVATPGRMFDL-IYQKHIKITRVKILVLDEADHMLD-LGFIKDIQDVKKFLPA 177
Query: 877 TCQMMFFSATYGTAVMQL 930
Q +FFSAT + +L
Sbjct: 178 RHQTLFFSATINEEIKKL 195
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 77.4 bits (182), Expect = 7e-13
Identities = 61/195 (31%), Positives = 91/195 (46%), Gaps = 2/195 (1%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F + L N+L + G+ AP+ IQ Q+Q+GTGKTAAF + +
Sbjct: 4 FQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVI-GQAQTGTGKTAAFGIPLI 62
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQT-GEV-AAKMAKFCPEIKLKYAVRGEELPRGSKITD 711
R+D Q L L+PT ELA+Q E+ + K K + + V R K
Sbjct: 63 ERLDEKANDVQALVLTPTRELALQVCNEIDSLKGNKRLNLLPVYGGVSIGNQIRALKRRV 122
Query: 712 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQMM 891
+++GTPG++ D + G D+ KIK V+DEAD M++ G I Q++
Sbjct: 123 DLVVGTPGRIID-HLNRGTLDITKIKYLVIDEADEMLD-MGFIEDVEMILSKTNKEKQIL 180
Query: 892 FFSATYGTAVMQLLR 936
FSAT ++ L R
Sbjct: 181 MFSATMPQRIVTLAR 195
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 77.4 bits (182), Expect = 7e-13
Identities = 63/202 (31%), Positives = 102/202 (50%), Gaps = 10/202 (4%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF L+L +++ + + P+ IQ A++ G+GKTA+F++
Sbjct: 86 TFEELNLPQEIMEVIKENNWTNPTPIQSLSIPIGLKGNDMVGIAKT--GSGKTASFLIPA 143
Query: 535 LSRVDSNKXY-----PQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYA--VRGEELPR 693
L + + + P VL LSPT ELA+QT EVA A+FC ++ K+ GE+ R
Sbjct: 144 LMHISAQRKISENDGPIVLVLSPTRELALQTDEVA---AQFCVKMGYKHVCIYGGEDRHR 200
Query: 694 G-SKITDH--ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHK 864
+K+ H I+ TPG++ D+ ++ G+F+ + VLDEAD M++ G + Q I
Sbjct: 201 QINKLRFHPEIVTATPGRLIDF-LQSGVFNPNRANFLVLDEADRMLD-MGFEPQIRAIIA 258
Query: 865 CLXSTCQMMFFSATYGTAVMQL 930
L + FSAT+ + QL
Sbjct: 259 SLTKDRETFMFSATWPKEIRQL 280
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 77.0 bits (181), Expect = 9e-13
Identities = 66/192 (34%), Positives = 93/192 (48%), Gaps = 8/192 (4%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAF---V 525
TF L+L +LK + G+ +P+ IQ AQ+ GTGKTAAF +
Sbjct: 2 TFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQT--GTGKTAAFSIPI 59
Query: 526 LAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAV---RGEELPRG 696
L L + D K + L L+PT ELAIQ GE ++ LK+AV + P+
Sbjct: 60 LQKLYKTDHRKGI-KALVLTPTRELAIQIGESFEAYGRY---TGLKHAVIFGGVGQKPQT 115
Query: 697 SKITD--HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCL 870
+ IL+ TPG++ D + G + + FVLDEAD M++ G RI K L
Sbjct: 116 DALRSGIQILVATPGRLLDL-ISQGFISLSSLDFFVLDEADRMLD-MGFIHDIKRILKLL 173
Query: 871 XSTCQMMFFSAT 906
+ Q +FFSAT
Sbjct: 174 PARRQTLFFSAT 185
>UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-independent RNA helicase
DbpA - Sulfurovum sp. (strain NBC37-1)
Length = 453
Score = 77.0 bits (181), Expect = 9e-13
Identities = 52/154 (33%), Positives = 78/154 (50%), Gaps = 3/154 (1%)
Frame = +1
Query: 484 AQSQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLK 663
AQS++G+GKT AF + + D PQ + ++PT ELA Q K+A + +K+
Sbjct: 45 AQSKTGSGKTLAFGIPAVMGTDVKSNKPQTIVITPTRELAEQVAMELRKIAAYKANLKIL 104
Query: 664 YAVRGEEL-PRGSKITD--HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQG 834
G L + + HILIGTPG++ D K G + IK VLDEAD M++ G
Sbjct: 105 TLYGGVPLRAQADSLAKGAHILIGTPGRIQDHLAK-GTLTLESIKTLVLDEADRMLD-MG 162
Query: 835 HQXQCIRIHKCLXSTCQMMFFSATYGTAVMQLLR 936
+ I+I + Q + FSAT+ + L +
Sbjct: 163 FYEEIIKIGSNMPKQKQTLLFSATFPPKIESLAK 196
>UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helicase
protein; n=1; Methylophilales bacterium HTCC2181|Rep:
putative ATP-dependent RNA helicase protein -
Methylophilales bacterium HTCC2181
Length = 427
Score = 76.6 bits (180), Expect = 1e-12
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 6/198 (3%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
+F +L ++LK + G+ P+ IQ + A +Q+GTGKTAAFVL
Sbjct: 2 SFQTFNLDASILKAIQEAGYDQPTPIQTKSIPEIMLN--KHVLASAQTGTGKTAAFVLPI 59
Query: 535 LSRVDSNKXY---PQVLCLSPTYELAIQTGEVAAKMAKF--CPEIKLKYAVR-GEELPRG 696
L ++ N+ P+VL +SPT ELA Q + K +++ I + + G +
Sbjct: 60 LDKLTKNRSEGRGPRVLIVSPTRELATQITDSIKKYSRYLRINSITITGGISYGLQNRMF 119
Query: 697 SKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXS 876
SK D IL+ TPG++ D + + ++V +LDEAD M++ G +I+
Sbjct: 120 SKPID-ILVATPGRLLDL-YQQKKINFKGLEVMILDEADRMLD-MGFVPDIRKIYNATSK 176
Query: 877 TCQMMFFSATYGTAVMQL 930
QM+ FSAT+ + ++
Sbjct: 177 KQQMLMFSATFDPPIQKI 194
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 76.6 bits (180), Expect = 1e-12
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 3/195 (1%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L L +L + GF +P+ IQ + ++Q+GTGKTAAF L L
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEG--RDALGKAQTGTGKTAAFSLPLL 85
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL---PRGSKIT 708
++++ ++ PQ + ++PT ELAIQ + + +K+ G + R K
Sbjct: 86 NKLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSG 145
Query: 709 DHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQM 888
HI++GTPG++ D + + + F+LDEAD M+ + G I + + Q
Sbjct: 146 AHIVVGTPGRVKDL-ITRDRLHLDECHTFILDEADEML-KMGFVDDVTWIMEQAPESAQR 203
Query: 889 MFFSATYGTAVMQLL 933
+ FSAT V +++
Sbjct: 204 VLFSATMPPMVKEIV 218
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 76.6 bits (180), Expect = 1e-12
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 2/197 (1%)
Frame = +1
Query: 346 SVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFV 525
S + F ++ L +LL+ + GF P+ IQ Q+Q+GTGKTA+F
Sbjct: 2 SFENFYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLD--LMGQAQTGTGKTASFG 59
Query: 526 LAXLSRVDSNKXYPQVLCLSPTYELAIQ-TGEVAAKMAKFCPEIKLKYAVRGEELP-RGS 699
+ L+RV + Q L L PT ELA+Q T E+++ + ++ Y + EL R
Sbjct: 60 IPILNRVIKGEGL-QALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIELQLRSL 118
Query: 700 KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXST 879
+ I++GTPG++ D + G + +K VLDEAD M++ G +I
Sbjct: 119 RRNPEIIVGTPGRLMD-HMNRGTISLSPLKYVVLDEADEMLD-MGFLPDIQKILSQCPRE 176
Query: 880 CQMMFFSATYGTAVMQL 930
Q FSAT V +L
Sbjct: 177 RQTFLFSATLPDEVREL 193
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 76.2 bits (179), Expect = 2e-12
Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 3/148 (2%)
Frame = +1
Query: 373 LXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXLSRVDS 552
L LL G+ G+ PS IQ + A++++GTGK+ A+++ L R+D
Sbjct: 96 LKRELLMGIFEMGWEKPSPIQEESIPIALSG--RDILARAKNGTGKSGAYLIPMLERIDL 153
Query: 553 NKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD---HILI 723
K + Q L L PT ELA+Q +++ ++AK +K+ G L D H++I
Sbjct: 154 KKDHIQALVLVPTRELALQVSQISIQIAKHLGGVKVMATTGGTNLRDDIMRLDETVHVVI 213
Query: 724 GTPGKMFDWGVKFGMFDMGKIKVFVLDE 807
TPG++ D +K G+ + K+++ V+DE
Sbjct: 214 ATPGRILDL-MKKGVAKVDKVQIMVMDE 240
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 76.2 bits (179), Expect = 2e-12
Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 5/199 (2%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF LHL LLK V GF P+ IQ + A + +G+GKTAAF+L
Sbjct: 191 TFEELHLSRPLLKAVQKLGFSQPTPIQ--AKAIPLALNGKDILASASTGSGKTAAFLLPV 248
Query: 535 LSRV---DSNKXYPQVLCLSPTYELAIQTGEVAAKMAKF--CPEIKLKYAVRGEELPRGS 699
L R+ DS +VL L PT ELA+Q V +A+F + + +
Sbjct: 249 LERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSNKAQEVEL 308
Query: 700 KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXST 879
+ + ++I TPG++ D + + +++ +LDEAD +++ G + + +I + +
Sbjct: 309 RKSPDVVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLD-MGFKDEINKIVESCPTN 367
Query: 880 CQMMFFSATYGTAVMQLLR 936
Q M FSAT V L +
Sbjct: 368 RQTMLFSATLNDEVKTLAK 386
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 75.8 bits (178), Expect = 2e-12
Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 5/154 (3%)
Frame = +1
Query: 484 AQSQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLK 663
A++++G+GKTAAF + L R+ + Q L L PT ELA Q + ++A+F IK+
Sbjct: 46 AKAKTGSGKTAAFGIGLLDRIVVSDFTTQALVLCPTRELADQVSKELRRLARFAQNIKIL 105
Query: 664 YAVRGEELPRGSKI-----TDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINR 828
G+ P G ++ HI++GTPG++ D ++ + +KV VLDEAD M++
Sbjct: 106 TLCGGQ--PMGQQLDSLVHAPHIVVGTPGRIQD-HLRKQSLALDSLKVLVLDEADRMLD- 161
Query: 829 QGHQXQCIRIHKCLXSTCQMMFFSATYGTAVMQL 930
G + S Q + FSATY + Q+
Sbjct: 162 MGFTDAIDDVISYTPSDRQTLLFSATYPQEIEQI 195
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 75.8 bits (178), Expect = 2e-12
Identities = 57/185 (30%), Positives = 84/185 (45%), Gaps = 2/185 (1%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F AL L P + + + A GF PS IQ Q+Q+GTGKTAAF L +
Sbjct: 4 FTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDII-GQAQTGTGKTAAFGLPIV 62
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAK--FCPEIKLKYAVRGEELPRGSKITD 711
+++ PQ L L PT ELAIQ E K + L + R K
Sbjct: 63 QKIEPGLKKPQALILCPTRELAIQVNEEIKSFCKGRGITTVTLYGGAPIMDQKRALKKGV 122
Query: 712 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQMM 891
+++ TPG+ + ++ G ++ ++ VLDEAD M+N G ++ K ++
Sbjct: 123 DLVVATPGRCIHF-IEDGKLELDSLEYLVLDEADEMLN-MGFVEDVEKVLKASPDDRTVL 180
Query: 892 FFSAT 906
FSAT
Sbjct: 181 MFSAT 185
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 75.8 bits (178), Expect = 2e-12
Identities = 54/160 (33%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF L L LL+ + GF PSKIQ + A +Q+GTGKTAAF
Sbjct: 2 TFDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAED-RDMVALAQTGTGKTAAFGFPL 60
Query: 535 LSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG---EELPRGSKI 705
L +D++ Q L ++PT EL +Q AK +++ G +E R
Sbjct: 61 LQNIDASSKTTQGLIIAPTRELCLQITNEMKLYAKHIKGVRVVAVYGGSNIQEQAREISR 120
Query: 706 TDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMIN 825
I++ TPG+M D ++ M D+ K+ VLDEAD M+N
Sbjct: 121 GAQIVVATPGRMQDM-MRRRMVDITKLSYCVLDEADEMLN 159
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 75.8 bits (178), Expect = 2e-12
Identities = 61/196 (31%), Positives = 96/196 (48%), Gaps = 3/196 (1%)
Frame = +1
Query: 349 VKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVL 528
VK+F L L ++ KGV SKIQ + QS SGTGKT +++
Sbjct: 9 VKSFFDLKLKNSIKKGVFINAMYYCSKIQSITLIPLLKG--RDIIYQSPSGTGKTTCYII 66
Query: 529 AXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCP-EIKLKYAVR--GEELPRGS 699
+++ + PQ L L PT EL+IQ V + + I + R GE+L +
Sbjct: 67 GTSNQLCQSINSPQCLILVPTRELSIQIRNVFNVLNIYTKNSITSCHGGRWLGEDL-KNL 125
Query: 700 KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXST 879
K H ++GTPG++ ++ G + KI+ FVLDEAD+++N+ + I++ L S
Sbjct: 126 KKNFHGIVGTPGRVLHL-LQIGSLAITKIRTFVLDEADILMNK-NFKIDIFNIYRYLNSK 183
Query: 880 CQMMFFSATYGTAVMQ 927
Q++ SAT +Q
Sbjct: 184 VQIIICSATIPLYTLQ 199
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 75.8 bits (178), Expect = 2e-12
Identities = 56/187 (29%), Positives = 88/187 (47%), Gaps = 3/187 (1%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF L L ++K + GF + IQ + Q+Q+GTGKTAAF +
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQN--KDVIGQAQTGTGKTAAFGIPI 60
Query: 535 LSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP---RGSKI 705
+ +V+ Q L ++PT ELAIQ E K+ +++ G+++ R K
Sbjct: 61 VEKVNVKNSAVQALVVAPTRELAIQVSEELYKIGA-VKRVRVLPIYGGQDIERQIRALKK 119
Query: 706 TDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQ 885
H+++GTPG++ D + G + + VLDEAD M+N G I + + Q
Sbjct: 120 HPHVIVGTPGRIID-HINRGTLRLEHVHTVVLDEADEMLN-MGFIEDIEAILSHVPAERQ 177
Query: 886 MMFFSAT 906
+ FSAT
Sbjct: 178 TLLFSAT 184
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 75.8 bits (178), Expect = 2e-12
Identities = 47/148 (31%), Positives = 80/148 (54%), Gaps = 3/148 (2%)
Frame = +1
Query: 487 QSQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKY 666
Q+++G+GKTAAF L L ++D++ Q L L PT ELA Q ++A+F P K+
Sbjct: 46 QAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILT 105
Query: 667 AVRGEE--LPRGS-KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGH 837
G+ + R S + HI++ TPG++ D ++ G + + V+DEAD M++ G
Sbjct: 106 LCGGQPFGMQRDSLQHAPHIIVATPGRLLD-HLQKGTVSLDALNTLVMDEADRMLD-MGF 163
Query: 838 QXQCIRIHKCLXSTCQMMFFSATYGTAV 921
+ + ++ Q + FSAT+ A+
Sbjct: 164 SDAIDDVIRFAPASRQTLLFSATWPEAI 191
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 75.4 bits (177), Expect = 3e-12
Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 3/197 (1%)
Frame = +1
Query: 349 VKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVL 528
+KTF L + P + K + G+ P +Q A +Q+GTGKTAAF L
Sbjct: 1 MKTFEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGENNDVV-ALAQTGTGKTAAFGL 59
Query: 529 AXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP---RGS 699
L ++D PQ L L PT EL +Q +K+ +K+ G + R
Sbjct: 60 PLLQQIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYIDGLKVLPVYGGSSIDSQIRSL 119
Query: 700 KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXST 879
K HI++ TPG++ D ++ + + V+DEAD M+N G I +
Sbjct: 120 KRGVHIIVATPGRLLDL-MERKTVSLSTVHNIVMDEADEMLN-MGFTDSINAILADVPKE 177
Query: 880 CQMMFFSATYGTAVMQL 930
+ FSAT + ++
Sbjct: 178 RNTLLFSATMSPEIARI 194
>UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducible
ATP-independent RNA helicase; n=2;
Enterobacteriaceae|Rep: Cold-shock DEAD-box protein A,
inducible ATP-independent RNA helicase - Blochmannia
floridanus
Length = 487
Score = 75.4 bits (177), Expect = 3e-12
Identities = 62/201 (30%), Positives = 93/201 (46%), Gaps = 4/201 (1%)
Frame = +1
Query: 340 LYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAA 519
L S +F L L ++ + G+ AP IQ A + G+GKTAA
Sbjct: 2 LDSENSFVDLGLNTYIVDMLSNIGYQAPLPIQTQCIPLLLKGCDLLGMAHT--GSGKTAA 59
Query: 520 FVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVA---AKMAKFCPEIKLKYAVRGEELP 690
F+L L +D + + Q L + PT ELAIQ G V K I + Y + +
Sbjct: 60 FLLPLLQNIDIKQRFVQGLIIVPTRELAIQIGHVCMYFIKSLSHIINIAVLYGGQNYRIQ 119
Query: 691 -RGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKC 867
K HI+IGTPG++ D + G+ D+ K+K ++DEAD M+ R G I +
Sbjct: 120 FNDLKKNPHIIIGTPGRLLD-HLSRGL-DISKLKTLIIDEADEML-RMGFIEDIEHIIRY 176
Query: 868 LXSTCQMMFFSATYGTAVMQL 930
+ + Q FSAT ++ +L
Sbjct: 177 VPTHRQTALFSATLPVSIRKL 197
>UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase;
n=3; Cryptosporidium|Rep: Drs1p, eIF4a-1-family RNA SFII
helicase - Cryptosporidium parvum Iowa II
Length = 573
Score = 75.4 bits (177), Expect = 3e-12
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 19/213 (8%)
Frame = +1
Query: 349 VKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVL 528
+K + +L L LLK + F + IQ + A++++G+GKTAAF+L
Sbjct: 29 IKMWSSLELSRPLLKALSDLNFVEATLIQKEVIPLALSG--RDIMAEAETGSGKTAAFLL 86
Query: 529 AXL-----------SRVDS-----NKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKL 660
L SRV S +VL L P+ ELA+Q V + K+CP I
Sbjct: 87 PALERLLRSPYVRNSRVSSLGRVGGAVGTKVLVLLPSRELAMQCFGVLESLTKYCPVITR 146
Query: 661 KYAVRGEELPRGSKITD---HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQ 831
G + + +I HI+I TPG++ D + + +++ +LDEAD +++
Sbjct: 147 AVVTGGMNIQQQERILKCQPHIVIATPGRILDMLLNTLSIQLELLEIIILDEADRLLD-M 205
Query: 832 GHQXQCIRIHKCLXSTCQMMFFSATYGTAVMQL 930
G + +C+ I K T Q M FSAT +V L
Sbjct: 206 GFRQECLEILKYSSRTRQTMLFSATLSRSVTDL 238
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 75.4 bits (177), Expect = 3e-12
Identities = 63/200 (31%), Positives = 97/200 (48%), Gaps = 6/200 (3%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
+F +++L +LKG+ GF P++IQ + + +G+GKTAAF++
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLG--KDIVGAAVTGSGKTAAFIVPI 317
Query: 535 LSRVDSN-KXYP--QVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP---RG 696
L R+ K P +VL L PT ELA+Q VA K+A F +I + + G L +
Sbjct: 318 LERLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASFT-DIMVCLCIGGLSLKLQEQE 376
Query: 697 SKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXS 876
+ I+I TPG+ D F + I++ V+DEAD M+ G + I +
Sbjct: 377 LRKRPDIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRML-EDGFADELNEIIQACPK 435
Query: 877 TCQMMFFSATYGTAVMQLLR 936
+ Q M FSAT V L+R
Sbjct: 436 SRQTMLFSATMTDKVDDLIR 455
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 74.9 bits (176), Expect = 4e-12
Identities = 61/200 (30%), Positives = 94/200 (47%), Gaps = 3/200 (1%)
Frame = +1
Query: 346 SVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFV 525
S +F LHL P L + GF P+ IQ + + +GTGKTAAF+
Sbjct: 2 STTSFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAG--KDVIGTAATGTGKTAAFL 59
Query: 526 LAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKI 705
L + R+ + K + L L+PT ELA+Q GE + ++ + G + + ++
Sbjct: 60 LPLIDRL-AGKPGTRALVLAPTRELALQIGEELERFG-HARRVRGAVIIGGVGMAQQAEA 117
Query: 706 ---TDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXS 876
I+I TPG++ D ++ G + I+ VLDEAD M++ G + Q RI + L
Sbjct: 118 LRQKREIVIATPGRLVD-HLEQGNARLDGIEALVLDEADRMLD-MGFKPQLDRILRRLPK 175
Query: 877 TCQMMFFSATYGTAVMQLLR 936
Q + FSAT V R
Sbjct: 176 QRQTLLFSATMAGEVADFAR 195
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 74.9 bits (176), Expect = 4e-12
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Frame = +1
Query: 349 VKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVL 528
+ TF L L + K + + P+ IQ AQ+ GTGKTAA L
Sbjct: 1 MNTFQELKLIAPVQKALVEENYKIPTPIQAQTIPAALEGRDVLGCAQT--GTGKTAALAL 58
Query: 529 AXLSRVDSNK-----XYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPR 693
L+++ N +P L L+PT ELAIQ G+ + +KL+ + + +
Sbjct: 59 PILNQLGKNSRKSIPHHPLALVLAPTRELAIQIGD---SFDAYGRHLKLRSVLIYGGVGQ 115
Query: 694 GSKIT-----DHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRI 858
G+++ HIL+ TPG++ D + G + +++VFVLDEAD M++ G RI
Sbjct: 116 GNQVKALKRGAHILVATPGRLLDL-MNQGHIKLNQLEVFVLDEADRMLD-MGFLPDLKRI 173
Query: 859 HKCLXSTCQMMFFSATYGTAVMQL 930
L + Q +FFSAT + +L
Sbjct: 174 ITQLPTQRQSLFFSATLAPKITEL 197
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 74.5 bits (175), Expect = 5e-12
Identities = 64/208 (30%), Positives = 94/208 (45%), Gaps = 6/208 (2%)
Frame = +1
Query: 325 APXSPLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGT 504
+P + TF L L P + K + G+ +P+ IQ AQ+ GT
Sbjct: 2 SPRQDWTPMTTFADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQT--GT 59
Query: 505 GKTAAFVL---AXLSRVDSNKXYPQVLCLSPTYELAIQTGE---VAAKMAKFCPEIKLKY 666
GKTA+F L L+R + P+ L L PT ELA Q E + AK K + +
Sbjct: 60 GKTASFTLPMITMLARGRARARMPRSLVLCPTRELAAQVAENFDIYAKHVKLTKALLIGG 119
Query: 667 AVRGEELPRGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQ 846
E+ K D +LI TPG++ D + G + +KV V+DEAD M++ G
Sbjct: 120 VSFKEQEQAIDKGVD-VLIATPGRLLD-HFERGKLILNDVKVMVVDEADRMLD-MGFIPD 176
Query: 847 CIRIHKCLXSTCQMMFFSATYGTAVMQL 930
RI + T Q +FFSAT + ++
Sbjct: 177 IERIFGLVPFTRQTLFFSATMAPEIERI 204
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 74.5 bits (175), Expect = 5e-12
Identities = 58/198 (29%), Positives = 95/198 (47%), Gaps = 5/198 (2%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L +L + G+ P++IQ + AQ+Q+GTGKTAAF + L
Sbjct: 20 FEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTD-KDLIAQAQTGTGKTAAFGIPLL 78
Query: 538 SRVD--SNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD 711
R+D +NK + + + ++PT ELA+Q E K K +K+ G+ L + K +
Sbjct: 79 ERIDFKANK-FVKAIIVTPTRELALQIFE-ELKSLKGTKRVKITTLYGGQSLEKQFKDLE 136
Query: 712 ---HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTC 882
I++GTPG++ D + D+ ++ VLDEAD M++ G + I K
Sbjct: 137 KGVDIVVGTPGRIID-HLNRDTLDLSHVEYLVLDEADRMLD-MGFLDDVLEIIKRTGENK 194
Query: 883 QMMFFSATYGTAVMQLLR 936
+ FSAT ++ + R
Sbjct: 195 RTFLFSATMPKEIVDIAR 212
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 74.5 bits (175), Expect = 5e-12
Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF L P++ K + A G+ P+ IQ AQ+ GTGKTA F L
Sbjct: 21 TFADFALHPDIQKAIDAQGYTQPTPIQAKAIPVVMTGVDVMGAAQT--GTGKTAGFSLPI 78
Query: 535 LSRV-------DSNKXYP-QVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL- 687
L+R+ S +P + L L+PT ELA Q AKF P ++ G ++
Sbjct: 79 LNRLMPLATENTSPARHPVRALILTPTRELADQVAANVHTYAKFTP-LRSTVVYGGVDIN 137
Query: 688 PRGSKITD--HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIH 861
P+ + ++I TPG++ D V+ ++G+++V VLDEAD M++ G RI
Sbjct: 138 PQIQTLRRGVELVIATPGRLLD-HVQQKSINLGQVQVLVLDEADRMLD-MGFLPDLQRII 195
Query: 862 KCLXSTCQMMFFSATYGTAVMQLLR 936
L T Q + FSAT+ + +L +
Sbjct: 196 NLLPKTRQNLLFSATFSPEIQKLAK 220
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 74.1 bits (174), Expect = 7e-12
Identities = 63/198 (31%), Positives = 92/198 (46%), Gaps = 6/198 (3%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF ++L LLK + A F P+ IQ + A + +GTGKTAAF+L
Sbjct: 182 TFQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLG--KDICACAATGTGKTAAFMLPV 239
Query: 535 LSRV---DSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGS-- 699
L R+ +VL L PT EL IQ V ++A+F E+ AV G ++
Sbjct: 240 LERLIYKPREAPVTRVLVLVPTRELGIQVHAVTRQLAQFT-EVTTCLAVGGLDVKTQEAA 298
Query: 700 -KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXS 876
+ +LI TPG++ D F + I+V +LDEAD M++ + + Q I +
Sbjct: 299 LRSGPDVLIATPGRLIDHLHNCPSFSLNCIEVLILDEADRMLD-EYFEEQMKEIIRLCSH 357
Query: 877 TCQMMFFSATYGTAVMQL 930
Q + FSAT V L
Sbjct: 358 QRQTLLFSATMSEEVKDL 375
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 74.1 bits (174), Expect = 7e-12
Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 2/194 (1%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
+F L L L V GF P+ IQ A++++GTGKTAAF L
Sbjct: 47 SFEELGLNEQSLAAVRLKGFRCPTPIQAAAIPRLLAGDANII-AKARTGTGKTAAFGLPL 105
Query: 535 LSRVDSNKXYPQVLCLSPTYELAIQ-TGEVAAKMAKFCPEIKLKY-AVRGEELPRGSKIT 708
+ + S +P L L PT ELA Q E+++ + P I Y V E R +
Sbjct: 106 IQELGSPCEHPGALVLVPTRELAAQVASELSSLRIQKIPRIHTVYGGVSIAEQLRNLEQG 165
Query: 709 DHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQM 888
I++GT G++ D ++ G ++ ++ F+LDEAD M+N G I ++
Sbjct: 166 GEIIVGTTGRVID-HIERGSLELSYLRYFILDEADEMLN-MGFVEDIESIFSHANKDARV 223
Query: 889 MFFSATYGTAVMQL 930
+ FSAT ++ +
Sbjct: 224 LMFSATMPRQILSI 237
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 74.1 bits (174), Expect = 7e-12
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 3/181 (1%)
Frame = +1
Query: 403 AXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXLSRVDSNKXYPQVLCL 582
A GF P+ +Q + A+S +GTGKT A+ L L R+ + +PQ + L
Sbjct: 21 ASGFQKPTPVQEQAAQLIMDG--KDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVIL 78
Query: 583 SPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPR---GSKITDHILIGTPGKMFDWG 753
+P+ EL +Q +V K E++ + G + + K HI++GTPG++F+
Sbjct: 79 APSRELVMQIFQVIQDW-KAGSELRAASLIGGANVKKQVEKLKKHPHIIVGTPGRVFEL- 136
Query: 754 VKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQMMFFSATYGTAVMQLL 933
+K M ++K VLDE D ++ + H+ +I K Q++ FSAT +L
Sbjct: 137 IKAKKLKMHEVKTIVLDETDQLVLPE-HRETMKQIIKTTLRDRQLLCFSATLKKETEDVL 195
Query: 934 R 936
R
Sbjct: 196 R 196
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 74.1 bits (174), Expect = 7e-12
Identities = 58/156 (37%), Positives = 81/156 (51%), Gaps = 9/156 (5%)
Frame = +1
Query: 490 SQSGTGKTAAFVLAXLSRVD-----SNKXYPQVLCLSPTYELAIQTGE---VAAKMAKFC 645
+Q+GTGKTAAF L L+++D ++ PQVL LSPT ELA+Q + V + KF
Sbjct: 40 AQTGTGKTAAFALPILNQLDLDRSRADACAPQVLVLSPTRELAVQIAQSFNVYGRNVKF- 98
Query: 646 PEIKLKYAVRGEE-LPRGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMI 822
+ + G+ R K H+ I TPG++ D + G D+ + K FVLDEAD M+
Sbjct: 99 -RLTTIFGGVGQNPQVRALKRGVHVAIATPGRLLDL-MDQGYVDLSQAKTFVLDEADRML 156
Query: 823 NRQGHQXQCIRIHKCLXSTCQMMFFSATYGTAVMQL 930
+ G I L Q +FF+AT V QL
Sbjct: 157 D-MGFMPALKTIVSKLPKQRQTIFFTATMPPKVAQL 191
>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 533
Score = 73.7 bits (173), Expect = 9e-12
Identities = 63/202 (31%), Positives = 97/202 (48%), Gaps = 8/202 (3%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
+F L L P +LK V A G+ + +Q S +G+GKTAAF+L
Sbjct: 2 SFSELGLDPLILKSVLAAGYENATPVQQQAIPAALSGGD--LLVSSHTGSGKTAAFLLPS 59
Query: 535 LSRVDSNKXY----PQVLCLSPTYELAIQTGEVA----AKMAKFCPEIKLKYAVRGEELP 690
+ R+ + P+VL L+PT ELA+Q + A +M +F + A G +L
Sbjct: 60 IQRLLAEPAVKSIGPRVLVLTPTRELALQVEKAAMTYGKEMRRFRTACLVGGAPYGLQLK 119
Query: 691 RGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCL 870
R S+ D +++ TPG++ D ++ G D +++V VLDEAD M++ G I
Sbjct: 120 RLSQPVD-VVVATPGRLID-HLERGKIDFSRLEVLVLDEADRMLD-MGFVDDIKAIAARC 176
Query: 871 XSTCQMMFFSATYGTAVMQLLR 936
+ Q + FSAT V L R
Sbjct: 177 PAERQTLLFSATLDGVVGNLAR 198
>UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293|Rep: Superfamily II DNA and RNA helicase -
Leuconostoc mesenteroides subsp. mesenteroides (strain
ATCC 8293 /NCDO 523)
Length = 431
Score = 73.7 bits (173), Expect = 9e-12
Identities = 52/142 (36%), Positives = 73/142 (51%), Gaps = 3/142 (2%)
Frame = +1
Query: 496 SGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKM--AKFCPEIKLKYA 669
+GTGKT AFVL LSR+D+N QVL L+P+ ELA+QT +VA + A L
Sbjct: 39 TGTGKTLAFVLPVLSRIDTNLKRTQVLILAPSQELAMQTTQVAREWGNAVGASVASLIGG 98
Query: 670 VRG-EELPRGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQ 846
G + + K HI++GT G++ V G+ + I + DEAD M+ + H
Sbjct: 99 ANGRRQADKIKKDKPHIVVGTLGRVLTM-VDGGVLKLDHIATVIFDEADAMLTEERHD-S 156
Query: 847 CIRIHKCLXSTCQMMFFSATYG 912
+ L S Q+ FSAT G
Sbjct: 157 LHELADKLPSHIQLGLFSATSG 178
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 73.7 bits (173), Expect = 9e-12
Identities = 63/200 (31%), Positives = 96/200 (48%), Gaps = 7/200 (3%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L L L+K V G+ P+ IQ + A +Q+GTGKTA+FVL L
Sbjct: 3 FSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAG--KNVLAAAQTGTGKTASFVLPLL 60
Query: 538 SR-VDSNKXYP---QVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKI 705
R D+ K P + + L+PT ELA+Q E + AK+ P + + P+ ++
Sbjct: 61 HRFADAPKIRPKRVRAIILTPTRELALQVEENINQYAKYLPLTAMAMYGGVDAAPQKKRL 120
Query: 706 TD--HILIGTPGKMFDWGVKFGM-FDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXS 876
+ +L+ TPG++ D + + FD ++ V VLDEAD M++ G I + L
Sbjct: 121 IEGVDLLVATPGRLLDMYTQRAIRFD--EVSVLVLDEADRMLD-MGFIEDINSIIEKLPE 177
Query: 877 TCQMMFFSATYGTAVMQLLR 936
Q + FSAT V L +
Sbjct: 178 QRQNLLFSATLSKQVKALAK 197
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 73.3 bits (172), Expect = 1e-11
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 3/152 (1%)
Frame = +1
Query: 484 AQSQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLK 663
A+S++G+GKTAAF + + + PQ L L PT ELA Q + + + +K+
Sbjct: 46 AKSKTGSGKTAAFAIPICESIVWEENLPQALVLEPTRELAYQVKDEIFNVGRM-KRVKVP 104
Query: 664 YAVRGEELPRGS---KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQG 834
G + + K HI++GTPG++ D + G +K ++DEAD+M++ G
Sbjct: 105 VVFGGFPFDKQALTLKQKSHIVVGTPGRVLD-HCETGTLKCSNVKYVIIDEADLMLD-MG 162
Query: 835 HQXQCIRIHKCLXSTCQMMFFSATYGTAVMQL 930
RI L +M FSAT G A+ L
Sbjct: 163 FLDDVKRILSYLPENITIMLFSATMGEALYAL 194
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 73.3 bits (172), Expect = 1e-11
Identities = 63/196 (32%), Positives = 92/196 (46%), Gaps = 7/196 (3%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
+F L L P +LK + + AP IQ AQ+ G+GKTA+FVL
Sbjct: 10 SFATLGLSPAILKALEKQFYNAPYPIQEQAIPAILKGKDILGIAQT--GSGKTASFVLPI 67
Query: 535 LSRVDS----NKXYPQVLCLSPTYELAIQTGEVAAKMAKFCP-EIKLKYAVRGEEL-PRG 696
L + + + L L PT ELA+Q G+V + P +IK G + P+
Sbjct: 68 LQMLQTKPLGKNRHINALVLVPTRELAVQVGQVFQAFSNALPNKIKSLAVYGGVSINPQM 127
Query: 697 SKITD-HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLX 873
++ ILI TPG++ D ++ + ++V VLDEAD M+N G + + I K L
Sbjct: 128 IQLQGVEILIATPGRLLDLVDSKAVY-LSDVEVLVLDEADKMLN-LGFKEEMANIFKLLP 185
Query: 874 STCQMMFFSATYGTAV 921
Q + FSAT G V
Sbjct: 186 QKRQNLLFSATLGKDV 201
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 73.3 bits (172), Expect = 1e-11
Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 3/199 (1%)
Frame = +1
Query: 349 VKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVL 528
+ +F L L P ++K + G+ P+ IQ Q+ +GTGKTAAF +
Sbjct: 3 IPSFSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAG--NDVAGQAYTGTGKTAAFGI 60
Query: 529 AXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKIT 708
+ Q + L P+ ELA+Q G K+A I + G+ + R K
Sbjct: 61 PAIELCQPANRNVQTIVLCPSRELAVQVGTELNKLAMHKKGISILPVYGGQPIERQIKAL 120
Query: 709 D---HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXST 879
I+IGTPG++ D +K + + + VLDEAD M++ G + I +
Sbjct: 121 SRGVQIIIGTPGRVID-HIKRKTLLLDAVSLVVLDEADQMLD-MGFREDIEEILSHIPKE 178
Query: 880 CQMMFFSATYGTAVMQLLR 936
Q + SAT+ ++ + R
Sbjct: 179 RQTVILSATFPPEILDISR 197
>UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Chaetomium globosum|Rep: ATP-dependent RNA helicase
DBP10 - Chaetomium globosum (Soil fungus)
Length = 762
Score = 73.3 bits (172), Expect = 1e-11
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 5/198 (2%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F A+ L NLL+ + GF P+ IQ + +++G+GKTAAFV+ +
Sbjct: 88 FQAMGLNSNLLRAISRKGFSVPTPIQRKTIPLVLER--RDVVGMARTGSGKTAAFVIPMI 145
Query: 538 SRV--DSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKI-- 705
R+ S + + + +SP+ ELA+QT +V ++ K ++K V G+ L +
Sbjct: 146 ERLKAHSARVGARAIIMSPSRELALQTLKVVKELGK-GTDLKTVLLVGGDSLEEQFGLMA 204
Query: 706 -TDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTC 882
I+I TPG+ V+ + ++ ++ V DEAD + G Q I L +
Sbjct: 205 ANPDIIIATPGRFLHLKVEMSL-NLSSVRYVVFDEADRLF-EMGFAAQLTEILHALPPSR 262
Query: 883 QMMFFSATYGTAVMQLLR 936
Q + FSAT +++++ R
Sbjct: 263 QTLLFSATLPSSLVEFAR 280
>UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=1;
Mycoplasma mobile|Rep: DEAD-box ATP-dependent RNA
helicase - Mycoplasma mobile
Length = 557
Score = 72.9 bits (171), Expect = 2e-11
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 10/202 (4%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L + ++ + GF AP++IQ Q +Q+GTGKTAAF ++ +
Sbjct: 3 FQELDIDDKIINNLKKIGFEAPTQIQELVISTANKN--QNILGCAQTGTGKTAAFGVSII 60
Query: 538 SRVDSNKXYP-----QVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSK 702
+++ NK L L PT EL++Q E + P L A+ G R S
Sbjct: 61 NKILKNKKNNAKSSLTTLILVPTRELSVQVNENIKLFSSNLPITSL--AIYGGMRNRESH 118
Query: 703 ITD-----HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKC 867
+ I++ TPG++ D+ +K G + ++ VLDEAD+M++ G I K
Sbjct: 119 FSIFKRGLDIIVATPGRLLDY-IKSGKLSLSQVDTVVLDEADLMVD-MGFIDDVKEILKR 176
Query: 868 LXSTCQMMFFSATYGTAVMQLL 933
Q+M FSAT A+M L+
Sbjct: 177 TKEEKQVMLFSATMPKAIMNLV 198
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 72.9 bits (171), Expect = 2e-11
Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 8/191 (4%)
Frame = +1
Query: 373 LXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXLSRV-D 549
L P L+ + G+ AP+ IQ + +Q+G+GKTAAF L L ++ +
Sbjct: 12 LLPAFLRAIGDKGYRAPTAIQSQAIPAILLG--RDVVGSAQTGSGKTAAFALPMLQQLAN 69
Query: 550 SNKXYPQV---LCLSPTYELAIQTGEVAAKMAKFCPE-IKLKYAVRGEEL-PRGSKITD- 711
+ P+ L L PT ELA Q GE A AK+ P+ +K+ G + P+ +
Sbjct: 70 APTGTPRPTRGLILVPTRELAAQVGEAIAGFAKYLPQRVKVAVVFGGVSINPQMMNLRGG 129
Query: 712 -HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQM 888
I++ TPG++ D ++ + ++ VLDEAD +++ G + RI + L Q
Sbjct: 130 ADIVVATPGRLLDL-LEHNALKISEVSTLVLDEADRLLD-LGFGEELGRILELLPPRRQN 187
Query: 889 MFFSATYGTAV 921
+FFSAT+ A+
Sbjct: 188 LFFSATFPPAI 198
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 72.9 bits (171), Expect = 2e-11
Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 7/199 (3%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L L L + F P+ IQ + A +Q+GTGKT AF+L +
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAG--KDIVATAQTGTGKTLAFLLPTI 61
Query: 538 SRVDSNKXYPQV--LCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD 711
+ + P V L L+PT ELA+Q E ++A+ I+ AV G L S++ D
Sbjct: 62 QLLSTEPRQPGVRALILTPTRELALQINEALLQIAR-GTGIRAAVAVGG--LNERSQLRD 118
Query: 712 -----HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXS 876
+I++ TPG+++D+ + G+ ++ +++ +LDE+D M++ G RI + +
Sbjct: 119 IRGGANIVVATPGRLYDF-MSRGLINLTTVRMLILDESDRMLD-MGFLPTIKRIIAAMPA 176
Query: 877 TCQMMFFSATYGTAVMQLL 933
Q + FSAT ++V QL+
Sbjct: 177 ERQTLLFSATLESSVKQLV 195
>UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Pseudomonas putida W619
Length = 621
Score = 72.9 bits (171), Expect = 2e-11
Identities = 64/197 (32%), Positives = 95/197 (48%), Gaps = 7/197 (3%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L LLK V F P+ +Q + +Q+G+GKTAAFVL L
Sbjct: 184 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQG--RDLRVTAQTGSGKTAAFVLPLL 241
Query: 538 SR-VDSNKXYPQV--LCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGS--- 699
+R VD ++ L L PT ELA QT + ++F IK GE+ +
Sbjct: 242 NRLVDLKGARVEIRALILLPTRELAQQTLKQVQLFSQF-TYIKAGLVTGGEDFKEQAAML 300
Query: 700 -KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXS 876
K+ D +LIGTPG++ + + G D+ ++V +LDEAD M++ G R+ K +
Sbjct: 301 RKVPD-VLIGTPGRLLE-QLNAGNLDLSHVQVMILDEADRMLD-MGFAEDMERLCKECEN 357
Query: 877 TCQMMFFSATYGTAVMQ 927
Q + FSAT G A ++
Sbjct: 358 REQTLLFSATTGGAALR 374
>UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 407
Score = 72.9 bits (171), Expect = 2e-11
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 11/204 (5%)
Frame = +1
Query: 346 SVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFV 525
S +F L L L + + A GF APS +Q AQ++SGTGKT FV
Sbjct: 35 SSASFGDLQLDERLTRALRAAGFDAPSPVQLACVPLGRFGCD--VIAQAKSGTGKTMTFV 92
Query: 526 LAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEI--KLKYAVRGEELPRGS 699
+ L RVD+ + Q L L+PT E A+QT E +M + ++ + + L G
Sbjct: 93 VIALERVDAGRRRTQALALAPTRECAVQTHECFVEMIEKFKDMDGDARGGIETCLLVGGL 152
Query: 700 KITD---------HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCI 852
+ + H+++GTPG+ ++ G ++ +LDEAD +++ + +
Sbjct: 153 PVKEDRARLASQPHVVVGTPGRTRQM-LEEGSMACDGARLLILDEADALLSGT-FERDVL 210
Query: 853 RIHKCLXSTCQMMFFSATYGTAVM 924
+ L Q+ FSATY ++
Sbjct: 211 FAYSMLPERKQVCAFSATYSKTLL 234
>UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD15481p
- Drosophila melanogaster (Fruit fly)
Length = 782
Score = 72.9 bits (171), Expect = 2e-11
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 7/201 (3%)
Frame = +1
Query: 349 VKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVL 528
+ +F ++L L++ + G+ P+ IQ A + GTGKTAA++L
Sbjct: 156 ITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAAT--GTGKTAAYML 213
Query: 529 AXLSRVD----SNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRG 696
L R+ +NK +VL L PT EL Q +V ++ +F I + A+ G ++
Sbjct: 214 PTLERLLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFTT-IDVGLAIGGLDVKAQ 272
Query: 697 SKI---TDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKC 867
+ I+I TPG++ D F + I+V +LDEAD M++ + I+ C
Sbjct: 273 EAVLRQNPDIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDEYFAEQMKEIINSC 332
Query: 868 LXSTCQMMFFSATYGTAVMQL 930
T Q M FSAT V L
Sbjct: 333 -CKTRQTMLFSATMSEQVKDL 352
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 72.9 bits (171), Expect = 2e-11
Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 3/196 (1%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L+L P++++ V GF + IQ + Q+++GTGKTAAF + +
Sbjct: 4 FTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEG--KDLIGQARTGTGKTAAFGIPMV 61
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD-- 711
+ Q L + PT ELA+Q E ++ K I+ G++ K +
Sbjct: 62 EAIRPTSKGVQGLVVVPTRELAVQVAEELTRIGK-VRGIRSVAIYGGQDFRSQVKALEEL 120
Query: 712 -HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQM 888
HI++GTPG++ + ++ I++ VLDEAD M++ G + +I K L Q
Sbjct: 121 PHIVVGTPGRLLE-HMRREYVRTSDIRIAVLDEADKMLD-MGFIDEAEKILKKLPERRQT 178
Query: 889 MFFSATYGTAVMQLLR 936
+ FSAT V L R
Sbjct: 179 LLFSATLSPPVQMLAR 194
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 72.9 bits (171), Expect = 2e-11
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 3/195 (1%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF +L +L+K + GF + IQ + Q+Q+GTGKTAAF +
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSN--KDVIGQAQTGTGKTAAFGIPL 61
Query: 535 LSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP---RGSKI 705
+ +++ Q + ++PT ELAIQ E K+ + K+ G+++ R K
Sbjct: 62 VEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQ-DKRAKVLPIYGGQDIGRQIRALKK 120
Query: 706 TDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQ 885
+I++GTPG++ D + + + V+DEAD M+N G I + S Q
Sbjct: 121 NPNIIVGTPGRLLD-HINRRTIRLNNVNTVVMDEADEMLN-MGFIDDIESILSNVPSEHQ 178
Query: 886 MMFFSATYGTAVMQL 930
+ FSAT + ++
Sbjct: 179 TLLFSATMPAPIKRI 193
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 72.5 bits (170), Expect = 2e-11
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 5/211 (2%)
Frame = +1
Query: 313 IQRXAPXSPLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQS 492
++ P + +F L L P + + V GF PS IQ + Q+
Sbjct: 31 LESVGPVETPPEMDSFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNG--KDVIGQA 88
Query: 493 QSGTGKTAAFVLAXLSRVDSNKXY--PQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKY 666
++GTGKTAAF + L ++DS + PQ + + PT ELA Q A ++A+ P ++
Sbjct: 89 RTGTGKTAAFSIPILEQLDSLEDCRDPQAIVIVPTRELADQVAAEAERLARGVP-TEIAV 147
Query: 667 AVRGEELPRGSKITDH---ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGH 837
G+ + R + ++ +++GTPG++ D ++ G + VLDEAD M++ G
Sbjct: 148 LSGGKNMNRQLRQLENGTQLVVGTPGRVHD-HLQRGTLRTNNVWCVVLDEADRMLD-IGF 205
Query: 838 QXQCIRIHKCLXSTCQMMFFSATYGTAVMQL 930
+ Q RI + Q + SAT V +L
Sbjct: 206 RPQIERIMRKCPRNRQTLLLSATLPPVVRRL 236
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 72.5 bits (170), Expect = 2e-11
Identities = 61/199 (30%), Positives = 94/199 (47%), Gaps = 7/199 (3%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF L L ++ + G+ +P+ IQ + A +Q+GTGKTAAF+L
Sbjct: 25 TFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQG--KDIMASAQTGTGKTAAFILPI 82
Query: 535 LSRV---DSNKXYP-QVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL-PRGS 699
+ + D K Y L L+PT ELA Q E +AK ++ G + P+
Sbjct: 83 IELLRAEDKPKRYQVHSLVLTPTRELAAQV-EASAKAYTKYLALRSDAVFGGVSIRPQVK 141
Query: 700 KITD--HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLX 873
++ IL+ TPG++ D + M +KV VLDEAD M++ G ++ + L
Sbjct: 142 RLQGGVDILVATPGRLLDL-INQKMIRFDNLKVLVLDEADRMLD-MGFIRDIKKVIEYLP 199
Query: 874 STCQMMFFSATYGTAVMQL 930
Q M FSAT+ T + +L
Sbjct: 200 KNRQNMMFSATFSTPIKKL 218
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 72.5 bits (170), Expect = 2e-11
Identities = 63/197 (31%), Positives = 93/197 (47%), Gaps = 4/197 (2%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F +LHL P LLK + GF P+ IQ + A + +G+GKTAAF+L L
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQ--ADAIPPAMSGRDVMASAVTGSGKTAAFLLPIL 60
Query: 538 SR-VDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL-PRGSKITD 711
+ +D + + L ++PT ELA Q E +A P I G + P+
Sbjct: 61 HQLIDRPRGTTRALVITPTRELAAQILEDLNDLAVHTP-ISAAAVFGGVSIRPQEHAFRR 119
Query: 712 --HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQ 885
+LIGTPG++ D + + ++ VLDEAD M++ G RI K + + Q
Sbjct: 120 GVDVLIGTPGRLLD-HFRAPYAKLAGLEHLVLDEADRMLD-MGFLPDIRRILKHIPARRQ 177
Query: 886 MMFFSATYGTAVMQLLR 936
+FFSAT + L R
Sbjct: 178 TLFFSATMPAPIGVLAR 194
>UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein; n=2;
Rhizobiales|Rep: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein - Bartonella
bacilliformis (strain ATCC 35685 / KC583)
Length = 462
Score = 72.5 bits (170), Expect = 2e-11
Identities = 60/200 (30%), Positives = 92/200 (46%), Gaps = 6/200 (3%)
Frame = +1
Query: 349 VKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVL 528
+ F L L ++K V G+ AP+ IQ AQ+ GTGKTA+FVL
Sbjct: 5 LNNFDNLGLSAKVIKAVQLAGYTAPTPIQSETIPHVLQHKDVLGIAQT--GTGKTASFVL 62
Query: 529 AXLSRVDSNK---XYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGS 699
L+ ++ + P+ L L PT ELA Q E K + + + G
Sbjct: 63 PMLTLLEKGRAKARMPRTLILEPTRELAAQVKENFDKYG-INHRLNVALLIGGVSFDHQD 121
Query: 700 KITDH---ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCL 870
+ + +LI TPG++ D + + MG +++ V+DEAD M++ G RI K
Sbjct: 122 RKLERGADVLIATPGRLLDHFERGTLLLMG-VEILVIDEADRMLD-MGFIPDIERICKLT 179
Query: 871 XSTCQMMFFSATYGTAVMQL 930
T Q +FFSAT +++L
Sbjct: 180 PFTRQTLFFSATMAPEIIKL 199
>UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 515
Score = 72.5 bits (170), Expect = 2e-11
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 7/201 (3%)
Frame = +1
Query: 349 VKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVL 528
V++F L L ++++ + F P+ +Q + A + +G+GKTAAF++
Sbjct: 15 VESFEELGLSHSIIRALHKMNFEIPTPVQNKTIPIALQG--RDVCASAVTGSGKTAAFLI 72
Query: 529 AXLSRV---DSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG----EEL 687
+ R+ S + + + LSPT ELA QT V +++ +F P L EE
Sbjct: 73 PTVERLLRSKSTEAQTRAVILSPTRELAAQTYSVLSQIIQFTPLTALLLTGGSSNVKEEE 132
Query: 688 PRGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKC 867
R + D L+ TPG++ D F + + V VLDE+D ++ ++G Q +HK
Sbjct: 133 ERLLEYPD-FLVCTPGRIIDHIKNCEGFTLENVLVLVLDESDRLL-QEGFYSQIEEVHKS 190
Query: 868 LXSTCQMMFFSATYGTAVMQL 930
L T Q + +AT ++V +L
Sbjct: 191 LPETTQSILVTATMNSSVSRL 211
>UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized protein
- Emericella nidulans (Aspergillus nidulans)
Length = 1676
Score = 72.5 bits (170), Expect = 2e-11
Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 6/201 (2%)
Frame = +1
Query: 352 KTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLA 531
++F +L +L+G+ A F P+ IQ + + +G+GKTAAFV+
Sbjct: 790 RSFQEFNLSRPILRGLAAVNFTNPTPIQQKTIPVALLG--KDIVGSAVTGSGKTAAFVVP 847
Query: 532 XLSRVDSN-KXYP--QVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSK 702
L R+ + P +V L PT ELA+Q VA K+A + +I V G L
Sbjct: 848 ILERLLFRPRKVPTSRVAILMPTRELAVQCYNVATKLATYT-DITFCQLVGGFSLREQEN 906
Query: 703 ITDH---ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLX 873
+ ++I TPG+ D F + +++ VLDEAD M+ G + I +
Sbjct: 907 VLKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRML-EDGFADELNEILTTIP 965
Query: 874 STCQMMFFSATYGTAVMQLLR 936
+ Q M FSAT +V +L+R
Sbjct: 966 KSRQTMLFSATMTDSVDKLIR 986
>UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DRS1 -
Ustilago maydis (Smut fungus)
Length = 932
Score = 72.5 bits (170), Expect = 2e-11
Identities = 62/205 (30%), Positives = 96/205 (46%), Gaps = 11/205 (5%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
+F A L +L+ + + F P+ IQ + A + +G+GKTAAF++
Sbjct: 334 SFGAFDLSRPVLRALSSLSFHKPTPIQSRTIPIALAG--KDIVAGAVTGSGKTAAFMIPT 391
Query: 535 LSRVD-------SNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPR 693
+ R+ ++ +VL L+PT ELAIQ V +AKF +I+ V G +
Sbjct: 392 IERLTWRAKTRTPHEAKSRVLILAPTRELAIQCYSVGKSIAKFT-DIRFCLCVGGLSVKS 450
Query: 694 GS---KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHK 864
K+ ++I TPG++ D F + I++ V+DEAD M+ G + I K
Sbjct: 451 QEAELKLRPEVVIATPGRLIDHVRNSASFTLDDIEILVMDEADRML-EDGFADELNEIVK 509
Query: 865 -CLXSTCQMMFFSATYGTAVMQLLR 936
C Q M FSAT V QL+R
Sbjct: 510 SCPKGARQTMLFSATMTDDVEQLVR 534
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 72.1 bits (169), Expect = 3e-11
Identities = 42/93 (45%), Positives = 52/93 (55%)
Frame = +1
Query: 343 YSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAF 522
YSV +F + L NLL+G+ A GF PS IQ AQSQSGTGKTA +
Sbjct: 18 YSVDSFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIKGFD--VIAQSQSGTGKTATY 75
Query: 523 VLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEV 621
V+A L R+D K Q + L+PT ELA Q +V
Sbjct: 76 VIAALQRIDMMKEDTQAIILAPTRELANQIQKV 108
>UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep:
LOC562123 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 483
Score = 72.1 bits (169), Expect = 3e-11
Identities = 57/189 (30%), Positives = 89/189 (47%), Gaps = 7/189 (3%)
Frame = +1
Query: 385 LLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXLSRV----DS 552
L K + G+ AP+ +Q + A + +G+GKT AF+L + R +
Sbjct: 181 LEKNLKVAGYEAPTPVQMQMVPVGLTG--RDVIATADTGSGKTVAFLLPVVMRALQSESA 238
Query: 553 NKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITDH---ILI 723
+ P L L+PT ELAIQ E A ++ + P + V G LP H I+I
Sbjct: 239 SPSCPACLILTPTRELAIQIEEQAKELMRGLPNMGTALLVGGMPLPPQLHRLKHNIKIVI 298
Query: 724 GTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQMMFFSA 903
GTPG++ + +K + ++ V+DEAD M+ + G Q Q + I + + Q + SA
Sbjct: 299 GTPGRLLEI-LKQKAVQLDHVRTVVVDEADTML-KMGFQQQVLDILEQVPDDHQTLLTSA 356
Query: 904 TYGTAVMQL 930
T T QL
Sbjct: 357 TIPTGTQQL 365
>UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA
helicase - Bacillus halodurans
Length = 389
Score = 72.1 bits (169), Expect = 3e-11
Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 4/186 (2%)
Frame = +1
Query: 388 LKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXLSRVDSNKXYP 567
L+ + G P++IQ Q SQ+GTGKT A++L L++ +
Sbjct: 14 LEALTNQGITEPTEIQQQVIPEALDG--QNLIVHSQTGTGKTLAYLLPMLTKTEELPEQT 71
Query: 568 QVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRG----SKITDHILIGTPG 735
Q L L+PT ELA+Q EV AK I + + G + R K H+ +GTPG
Sbjct: 72 QALILAPTQELAMQIVEV-AKQLTATTSITVLPLIGGANIKRQVEKLKKKKPHVAVGTPG 130
Query: 736 KMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQMMFFSATYGT 915
++ + ++ + +K+ V+DEAD M+ + K + + Q +F SAT+ +
Sbjct: 131 RILEL-MEMKKLKVPHVKMIVVDEADRMMEETSAWNAFENVAKRIGNEAQYLFVSATFAS 189
Query: 916 AVMQLL 933
+L+
Sbjct: 190 RFTELV 195
>UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3;
Deltaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Desulfovibrio desulfuricans (strain G20)
Length = 530
Score = 72.1 bits (169), Expect = 3e-11
Identities = 62/198 (31%), Positives = 88/198 (44%), Gaps = 6/198 (3%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
+F L P L++ V A GF P+ IQ Q + +GTGKTAAFVL
Sbjct: 57 SFARFSLHPALIEAVSARGFVNPTPIQEKALPPALAG--QDILGLAATGTGKTAAFVLPL 114
Query: 535 LSRV----DSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCP-EIKLKYAVRGEELPRGS 699
L R+ +S + + L ++PT EL Q E +A+FC Y G
Sbjct: 115 LHRLLLQGESARGTLRALVVAPTRELVAQIHEEVKTLARFCRLRSATVYGGVGMHAQTVQ 174
Query: 700 KITD-HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXS 876
T I++ PG++ D V+ G D+ + + VLDEAD+M + G I C
Sbjct: 175 LRTGVDIVLACPGRLLD-HVRRGHADLSHVDMLVLDEADMMFD-MGFLSDVREILHCTRV 232
Query: 877 TCQMMFFSATYGTAVMQL 930
Q M FSAT + +L
Sbjct: 233 RKQTMLFSATMPAPLREL 250
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 72.1 bits (169), Expect = 3e-11
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 7/193 (3%)
Frame = +1
Query: 349 VKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVL 528
+KTF + +++KG+ GF + +Q +Q+GTGKTAAF +
Sbjct: 1 MKTFAEFEINTDIMKGLDGLGFSVMTPVQEKIIPIVLNRQTDLVGL-AQTGTGKTAAFGI 59
Query: 529 AXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG-------EEL 687
+ D+ Q L L PT EL +Q M ++ ++K+ G EEL
Sbjct: 60 PLIQLTDTRLKRTQALVLCPTRELCVQVAGDLNLMGRYVQKLKIVPVYGGASIVSQTEEL 119
Query: 688 PRGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKC 867
+G++ +++ TPG++ D ++ G D+ + VLDEAD M+ + G Q + I
Sbjct: 120 RKGAQ----VVVATPGRLHDL-IRRGAVDLSGVSWVVLDEADEML-QMGFQDELNAILAV 173
Query: 868 LXSTCQMMFFSAT 906
+ + FSAT
Sbjct: 174 TPDSKNTLLFSAT 186
>UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 703
Score = 72.1 bits (169), Expect = 3e-11
Identities = 47/156 (30%), Positives = 84/156 (53%), Gaps = 5/156 (3%)
Frame = +1
Query: 484 AQSQSGTGKTAAFVLAXLSRVDSNKXYPQVLCL--SPTYELAIQTGEVAAKMAKFCPEIK 657
A S++G+GKTA+F+L + +++ + CL +P+ ELA+QTG K A +K
Sbjct: 42 AMSKTGSGKTASFLLPIVQKLNEHSTITGCRCLIITPSRELALQTGHYFQKYAS-QTNLK 100
Query: 658 LKYAVRGEEL-PRGSKITDH--ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINR 828
+ GE L P+ +T + ++I TPG++ + + + ++++ V+DEAD++
Sbjct: 101 CAQIIGGEALPPQFESLTKNPDVIIATPGRLLQI-IAETQYSLSRVQIIVIDEADLLF-E 158
Query: 829 QGHQXQCIRIHKCLXSTCQMMFFSATYGTAVMQLLR 936
QG + Q I K L Q + FSAT + + + R
Sbjct: 159 QGLEPQMTAILKLLPEKHQSLLFSATVPSVLAEFTR 194
>UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1117
Score = 71.7 bits (168), Expect = 3e-11
Identities = 48/148 (32%), Positives = 75/148 (50%), Gaps = 2/148 (1%)
Frame = +1
Query: 472 QXXXAQSQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 651
Q Q++SGTGKT F + L +D QVL L+PT E+A+Q + +
Sbjct: 4 QDLIVQAKSGTGKTCVFSVIALEGIDLTNPSTQVLILAPTREIAVQIQDTIRAIGCEMEG 63
Query: 652 IKLKYAVRGEEL-PRGSKITD-HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMIN 825
++ + G P K+ HI +GTPG++ +++ + G I++FVLDEAD +++
Sbjct: 64 LRSHVFIGGTLFGPDRQKLKKCHIAVGTPGRIKQL-IEYEVLKTGTIRLFVLDEADKLLD 122
Query: 826 RQGHQXQCIRIHKCLXSTCQMMFFSATY 909
Q Q I+ L QM+ SATY
Sbjct: 123 -DTFQEQVNWIYNHLSDNKQMLALSATY 149
>UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Culicidae|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 1061
Score = 71.7 bits (168), Expect = 3e-11
Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 2/186 (1%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F + L +L+G+ F PS IQ Q++SGTGKT F +
Sbjct: 24 FSKMFLSEPVLRGLTRNNFTHPSPIQARAIPLAKLGLD--LLVQAKSGTGKTLVFTVLIT 81
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD-- 711
+ + +PQ L + PT E+A+Q +V ++ P + K + G ++ + K
Sbjct: 82 ENHNPDVMFPQSLTVVPTREIAVQIEDVLNRIGYSVPNFRAKSFIGGLDISQDRKNLQSC 141
Query: 712 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQMM 891
++GTPG++ + +K + + +IK+ VLDEAD +I + + +I K L + Q +
Sbjct: 142 SAVVGTPGRI-NHLIKSNVLNTSQIKILVLDEADSLIT-GSLKPEVDQIVKMLPTKRQTV 199
Query: 892 FFSATY 909
SATY
Sbjct: 200 VCSATY 205
>UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;
n=6; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 41 - Arabidopsis thaliana (Mouse-ear cress)
Length = 505
Score = 71.7 bits (168), Expect = 3e-11
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 11/202 (5%)
Frame = +1
Query: 349 VKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVL 528
V TF + L P LL + G+ P+ IQ + A + +G+GKTA+F++
Sbjct: 109 VLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTG--KSLLASADTGSGKTASFLV 166
Query: 529 AXLSRV--------DSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEE 684
+SR + P + L+PT EL +Q + A + K P K V G+
Sbjct: 167 PIISRCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKGLP-FKTALVVGGDP 225
Query: 685 LP-RGSKITD--HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIR 855
+ + +I ++IGTPG++ D K ++ I FVLDE D M+ R G + Q ++
Sbjct: 226 MSGQLYRIQQGVELIIGTPGRVVDLLSKH-TIELDNIMTFVLDEVDCMLQR-GFRDQVMQ 283
Query: 856 IHKCLXSTCQMMFFSATYGTAV 921
I + L S Q++ FSAT V
Sbjct: 284 IFQAL-SQPQVLLFSATISREV 304
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 71.7 bits (168), Expect = 3e-11
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 4/182 (2%)
Frame = +1
Query: 373 LXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXLSRVDS 552
L P LL+ + GF PS++Q Q++SG GKTA FVL+ L +++
Sbjct: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILG--MDVICQAKSGMGKTAVFVLSTLQQIEP 110
Query: 553 NKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKI----TDHIL 720
+ L L T ELA Q + + + P+ K+ G + + HI+
Sbjct: 111 SPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIV 170
Query: 721 IGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQMMFFS 900
+GTPG++ + + + ++ F+LDE D M+ + I K Q+M FS
Sbjct: 171 VGTPGRVLALAREKDL-SLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFS 229
Query: 901 AT 906
AT
Sbjct: 230 AT 231
>UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP10 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 878
Score = 71.7 bits (168), Expect = 3e-11
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 5/198 (2%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F A+ L LLK + GF P+ IQ +++G+GKTAAFV+ +
Sbjct: 80 FQAMGLNVALLKAIAQKGFKIPTPIQRKAVPLILQG--DDVVGMARTGSGKTAAFVIPMI 137
Query: 538 SRV--DSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPR--GSKI 705
R+ S K + + +SP+ ELA+QT +V + + +++ V G+ L S
Sbjct: 138 ERLKTHSAKVGARGVIMSPSRELALQTLKVVKEFGR-GTDLRTILLVGGDSLEEQFNSMT 196
Query: 706 TD-HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTC 882
T+ I+I TPG+ V+ G+ D+ ++ V DEAD + G Q I L ++
Sbjct: 197 TNPDIIIATPGRFLHLKVEMGL-DLSSVQYIVFDEADRLF-EMGFAAQLAEILYALPTSR 254
Query: 883 QMMFFSATYGTAVMQLLR 936
Q + FSAT ++++ R
Sbjct: 255 QTLLFSATLPKSLVEFAR 272
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 71.3 bits (167), Expect = 5e-11
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 3/176 (1%)
Frame = +1
Query: 307 LAIQRXAPXSPLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXA 486
L I + +PL +V F + L ++ + GF P+ IQ
Sbjct: 29 LPIPERSLMTPLTTVDNFESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGANDFIGL 88
Query: 487 QSQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKY 666
S +GTGKTAAF + + +DS Q L LSPT ELA+Q E + K +++
Sbjct: 89 AS-TGTGKTAAFGIPLIENIDSTVKDTQALVLSPTRELALQVAEQLTLLGK-KKGVRVVT 146
Query: 667 AVRGEELPR---GSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMIN 825
G G K HI++ TPG++ D+ ++ M + +K VLDEAD M++
Sbjct: 147 IYGGASYRTQIDGIKRGAHIVVATPGRLVDF-LEQKMIKLQSVKTVVLDEADEMLS 201
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 71.3 bits (167), Expect = 5e-11
Identities = 53/162 (32%), Positives = 76/162 (46%), Gaps = 3/162 (1%)
Frame = +1
Query: 349 VKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVL 528
+K F L L LL G+ GF P++IQ +Q+GTGKTAAF L
Sbjct: 12 LKNFEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDGDFIGL-AQTGTGKTAAFGL 70
Query: 529 AXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP---RGS 699
L +D N Q L L+PT ELA Q +M+K ++ + G + R
Sbjct: 71 PLLDLIDVNSREVQALILAPTRELAQQICGQMEQMSKHLGKLNVVPVFGGANIMNQIRDI 130
Query: 700 KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMIN 825
+ I++ TPG++ D +K + +K VLDEAD M+N
Sbjct: 131 RRGAQIIVATPGRLMDL-MKRREVKLDALKYMVLDEADEMLN 171
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 71.3 bits (167), Expect = 5e-11
Identities = 56/193 (29%), Positives = 95/193 (49%), Gaps = 10/193 (5%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L P +L+ + G P+ IQ + Q+++GTGKT AF L
Sbjct: 3 FKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEG--KDLIGQARTGTGKTLAFALPIA 60
Query: 538 SRVDSNKXY---PQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLK-------YAVRGEEL 687
R+ ++ P+ L L+PT ELA+Q VA+++ P +K+ Y + E L
Sbjct: 61 ERLAPSQERGRKPRALVLTPTRELALQ---VASELTAVAPHLKVVAVYGGTGYGKQKEAL 117
Query: 688 PRGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKC 867
RG+ ++ TPG+ D+ ++ G+ D+ +++V VLDEAD M++ G + + +
Sbjct: 118 LRGADA----VVATPGRALDY-LRQGVLDLSRVEVAVLDEADEMLS-MGFEEEVEALLSA 171
Query: 868 LXSTCQMMFFSAT 906
+ Q + FSAT
Sbjct: 172 TPPSRQTLLFSAT 184
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 71.3 bits (167), Expect = 5e-11
Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 9/201 (4%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L L +L+ + G+ P+ IQ AQ+ GTGKTAAF+L +
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQT--GTGKTAAFMLPSI 61
Query: 538 SRV-DSNKXYP----QVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRG-S 699
R+ +++ P ++L L+PT EL Q +AK +K++ V G + + +
Sbjct: 62 DRLREADNRIPFKSCRMLVLAPTRELVSQIA-ASAKDYGALAGLKVQSIVGGTSVNKDRN 120
Query: 700 KI---TDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCL 870
K+ TD ILI TPG++ D + F++G ++V VLDEAD M++ G RI + +
Sbjct: 121 KLHRGTD-ILIATPGRLLDL-IDQKAFNLGSVEVLVLDEADQMLD-LGFVHALRRISQLV 177
Query: 871 XSTCQMMFFSATYGTAVMQLL 933
Q +FFSAT A+ +L+
Sbjct: 178 PKERQTLFFSATMPKAIKELV 198
>UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA
helicase-like protein; n=1; Oikopleura dioica|Rep:
ATP-dependent 61 kDa nucleolar RNA helicase-like protein
- Oikopleura dioica (Tunicate)
Length = 548
Score = 71.3 bits (167), Expect = 5e-11
Identities = 51/186 (27%), Positives = 91/186 (48%)
Frame = +1
Query: 373 LXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXLSRVDS 552
L P +L G+ A G+ P++IQ + A++++G+GKT A+++ + R+
Sbjct: 18 LDPRILSGIAALGWKEPTEIQEAGLPIALKG--KDILAKARTGSGKTGAYLIPIVQRI-L 74
Query: 553 NKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITDHILIGTP 732
+ + L + PT EL Q V ++ C ++ Y + G E+ + I+ I+IGTP
Sbjct: 75 HIASTRALIIGPTRELCSQIEAVVRELCVKCLDVVSIYEL-GSEVETEADISASIVIGTP 133
Query: 733 GKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQMMFFSATYG 912
G++ + +K + ++ V VLDEAD++ G+ I L T Q SAT
Sbjct: 134 GRILN-ALKSERLSLTELSVMVLDEADLLFG-FGNDKMVTEIVSHLPGTQQSFLMSATLS 191
Query: 913 TAVMQL 930
V ++
Sbjct: 192 EQVEKI 197
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 70.9 bits (166), Expect = 6e-11
Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 3/196 (1%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L + + K + GF PS IQ Q+Q+GTGKTAAF + +
Sbjct: 8 FNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGD--VIGQAQTGTGKTAAFGIPVV 65
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD-- 711
+V + + + Q L L+PT ELAIQ K++K +I+ G+ + K
Sbjct: 66 EKVSTGR-HVQALILTPTRELAIQVSGEIQKLSKH-KKIRTLPIYGGQSIVHQIKALKQG 123
Query: 712 -HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQM 888
++IGTPG++ D ++ + + +LDEAD M++ G I + + + Q
Sbjct: 124 VQVVIGTPGRIID-HLRRKTLILDHVNTVILDEADEMLD-MGFIDDIESILRQVKNERQT 181
Query: 889 MFFSATYGTAVMQLLR 936
+ FSAT A+ +L R
Sbjct: 182 LLFSATMPPAIKKLSR 197
>UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 598
Score = 70.9 bits (166), Expect = 6e-11
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 10/202 (4%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF L+L + K + + P+ IQ A++ G+GKTAAF++
Sbjct: 126 TFEELNLPDTITKTITDNKWEKPTPIQSVSIPVALKGHDLIGIAKT--GSGKTAAFLIPA 183
Query: 535 LSRVDSNKXY-----PQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGS 699
+ + + P VL LSPT ELA Q EVA FC + ++ RG
Sbjct: 184 MVHIGLQEPMYRGDGPIVLVLSPTRELAQQIAEVA---KGFCDNLMIRQTCLFGGAGRGP 240
Query: 700 KITD-----HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHK 864
+ D +++ TPG++ D+ ++ G M ++ VLDEAD M++ G + Q +I
Sbjct: 241 QANDLRHLPSLVVATPGRLIDF-IEGGQCPMNRVNFLVLDEADQMLD-MGFEPQIRKIIG 298
Query: 865 CLXSTCQMMFFSATYGTAVMQL 930
+ Q M FSAT+ + QL
Sbjct: 299 HISKDRQTMMFSATWPKEIQQL 320
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 70.9 bits (166), Expect = 6e-11
Identities = 52/199 (26%), Positives = 96/199 (48%), Gaps = 3/199 (1%)
Frame = +1
Query: 349 VKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVL 528
+K F +L L++ + G+ P+++Q +S++G+GKTAA+++
Sbjct: 1 MKGFEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAG--SDLVVRSKTGSGKTAAYLI 58
Query: 529 AXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKIT 708
++ K + L L PT ELA+Q +V+ + K I+ G + + ++
Sbjct: 59 PIINNTAKEKGI-RALILLPTRELAVQVAKVSEALGKRSG-IRTVVVYGGVSINKQIELI 116
Query: 709 ---DHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXST 879
+I++GTPG+ D + G+ + K+ FVLDEAD M++ G +I L
Sbjct: 117 LRGANIIVGTPGRTLDL-IDRGILNFDKVSYFVLDEADEMLD-MGFIEDIKKIINVLPVE 174
Query: 880 CQMMFFSATYGTAVMQLLR 936
Q FSAT + +++L +
Sbjct: 175 RQSFLFSATIPSEIIELAK 193
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 70.9 bits (166), Expect = 6e-11
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 7/205 (3%)
Frame = +1
Query: 343 YSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAF 522
+ TF L+L LL+ G+ P+ IQ + A + +G+GKTAAF
Sbjct: 164 FHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTG--RDLCASAITGSGKTAAF 221
Query: 523 VLAXLSRV---DSNKXYPQVLCLSPTYELAIQTGEVAAKMAKF----CPEIKLKYAVRGE 681
L L R+ +VL L+PT ELA+Q + +A+F C I +VR +
Sbjct: 222 ALPTLERLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQ 281
Query: 682 ELPRGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIH 861
E+ S I++ TPG+M D D+ + V +LDEAD ++ + G + +
Sbjct: 282 EVVLRS--MPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLL-QTGFATEITELV 338
Query: 862 KCLXSTCQMMFFSATYGTAVMQLLR 936
+ Q M FSAT V +L++
Sbjct: 339 RLCPKRRQTMLFSATMTEEVKELVK 363
>UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 836
Score = 70.5 bits (165), Expect = 8e-11
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 6/201 (2%)
Frame = +1
Query: 346 SVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFV 525
++ TF ++L LLK V + F P+ IQ A + GTGKTAA++
Sbjct: 152 TLATFYNMNLSRPLLKAVTSMNFVNPTPIQAATIPVALMGRDICGCAAT--GTGKTAAYM 209
Query: 526 LAXLSRV---DSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRG 696
L L R+ + +VL L PT EL +Q +V ++++F +++ +V G ++
Sbjct: 210 LPTLERLLYRPLDGAVTRVLVLVPTRELGVQVYQVTKQLSQFT-SVEVGLSVGGLDVKVQ 268
Query: 697 SKI---TDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKC 867
+ I+I TPG++ D F + I+V +LDEAD M++ + + +C
Sbjct: 269 ESVLRKNPDIVIATPGRLIDHLANTPTFSLDTIEVLILDEADRMLDEYFAEQMKHIVRQC 328
Query: 868 LXSTCQMMFFSATYGTAVMQL 930
T Q + FSAT V L
Sbjct: 329 -ARTRQTILFSATMTEEVKDL 348
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 70.5 bits (165), Expect = 8e-11
Identities = 64/199 (32%), Positives = 94/199 (47%), Gaps = 8/199 (4%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F AL + LLKGV A G P IQ Q +Q+G+GKTAAF L L
Sbjct: 89 FAALGITGVLLKGVEAAGMTEPKPIQTQAIPSQLEG--QDILGIAQTGSGKTAAFSLPIL 146
Query: 538 SRVD--SNKXYP---QVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG-EELPRGS 699
++ +K P + L L+PT ELA+Q + ++K I + G +L +
Sbjct: 147 QKIIGLGDKRRPKTARALILAPTRELAVQIEQTIRNVSK-SAHISTALVLGGVSKLSQIK 205
Query: 700 KITD--HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLX 873
+I +LI TPG++ D ++ G+ D+ + + VLDEAD M++ G RI K
Sbjct: 206 RIAPGIDVLIATPGRLTDL-MRDGLVDLSQTRWLVLDEADRMLD-MGFINDVKRIAKATH 263
Query: 874 STCQMMFFSATYGTAVMQL 930
+ Q FSAT + L
Sbjct: 264 AERQTALFSATMPKEIASL 282
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 70.5 bits (165), Expect = 8e-11
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 4/188 (2%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF L +LK + + G+ PS++Q Q +S++G+GKTA+F +
Sbjct: 4 TFEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKG--QNLVVRSKTGSGKTASFAIPL 61
Query: 535 LSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKF----CPEIKLKYAVRGEELPRGSK 702
++ + Q L + PT ELA+Q + + + + C I K +++ + +
Sbjct: 62 CENINVDYNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQR 121
Query: 703 ITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTC 882
+ HI++ TPG++ D + G + +K V+DEAD M N+ G Q +I L
Sbjct: 122 V--HIVVATPGRILD-HINRGSIKLENVKYLVIDEADKMFNK-GFVEQMEKILLNLPKEK 177
Query: 883 QMMFFSAT 906
+ FSAT
Sbjct: 178 IVSLFSAT 185
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 70.5 bits (165), Expect = 8e-11
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 6/197 (3%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L L L V G+ P+ IQ + +Q+GTGKTAAF L L
Sbjct: 135 FSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAG--RDVTGSAQTGTGKTAAFALPIL 192
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIK------LKYAVRGEELPRGS 699
++ +++ + L L PT ELA+Q E K +K+ + Y + E+L RG
Sbjct: 193 HKLGAHERRLRCLVLEPTRELALQVEEAFQKYSKYTDLTATVVYGGVGYGKQREDLQRGV 252
Query: 700 KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXST 879
++ TPG++ D ++ G + +++ VLDE D M++ G RI +
Sbjct: 253 ----DVVAATPGRLLD-HIEQGTMTLADVEILVLDEVDRMLD-MGFLPDVKRIVQQCPQA 306
Query: 880 CQMMFFSATYGTAVMQL 930
Q +FFSAT + QL
Sbjct: 307 RQTLFFSATLPPELAQL 323
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 70.5 bits (165), Expect = 8e-11
Identities = 62/191 (32%), Positives = 88/191 (46%), Gaps = 8/191 (4%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L L LL+ + + P+ IQ AQ+ GTGKTAAFVL L
Sbjct: 59 FTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQT--GTGKTAAFVLPIL 116
Query: 538 SRVDSNKXYP-----QVLCLSPTYELAIQTGEVAAKMAKFC-PEIKLKY--AVRGEELPR 693
R+ +N+ P + L L+PT ELA Q + A KF P + + A G + R
Sbjct: 117 HRIAANRARPAPRACRALVLAPTRELATQIADAARTYGKFTRPSVAVVIGGAKPGPQARR 176
Query: 694 GSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLX 873
D +L+ TPG++ D V G+ + ++ VLDEAD M++ G +I L
Sbjct: 177 MESGVD-LLVATPGRLLD-HVAAGVIRLDAVETVVLDEADQMLD-LGFIPAIRQIMAKLP 233
Query: 874 STCQMMFFSAT 906
Q + FSAT
Sbjct: 234 RQRQAVMFSAT 244
>UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_146,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 564
Score = 70.5 bits (165), Expect = 8e-11
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 5/204 (2%)
Frame = +1
Query: 334 SPLYSVKT-FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGK 510
S ++++ T F L L L+K G+ P+ +Q + A S +G+GK
Sbjct: 109 SKIFAIDTEFHQLKLNKALVKACHDQGYTHPTNVQAKIIPIIMNG--KDVLASSCTGSGK 166
Query: 511 TAAFVLAXLSRVDS--NKXYPQVLCLSPTYELAIQTGEVAAKMAKF--CPEIKLKYAVRG 678
TAAF+L + R + N Y + L + PT ELA+Q E+ K+ K+ C + AV
Sbjct: 167 TAAFLLPIMQRFGNLKNLQYSKALIILPTRELALQCFEMFEKLNKYANCTAALVIGAVPI 226
Query: 679 EELPRGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRI 858
++ + I+I TPG+ D ++ I++ V DEAD ++ G + + +I
Sbjct: 227 QQQETELRKYPDIIIATPGRTVDLLTNSSSLEIQNIEILVFDEADRLM-EMGFEKEIRQI 285
Query: 859 HKCLXSTCQMMFFSATYGTAVMQL 930
+ Q + SAT V QL
Sbjct: 286 LQATSKDRQTVLISATLNATVKQL 309
>UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;
n=1; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 27 - Arabidopsis thaliana (Mouse-ear cress)
Length = 633
Score = 70.5 bits (165), Expect = 8e-11
Identities = 60/202 (29%), Positives = 93/202 (46%), Gaps = 7/202 (3%)
Frame = +1
Query: 352 KTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLA 531
KTF +L L N K + GF ++IQ + +++G+GKT AF++
Sbjct: 154 KTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMG--EDVLGAARTGSGKTLAFLIP 211
Query: 532 XLSRVDSNKXYPQ----VLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGS 699
+ + K P+ VL + PT ELAIQ+ VA ++ K+ + K + GE+ +
Sbjct: 212 AVELLYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQTVGK-VIGGEKRKTEA 270
Query: 700 KITD---HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCL 870
+I ++L+ TPG++ D F +K V+DEAD I Q + +I L
Sbjct: 271 EILAKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEAD-RILEQNFEEDLKKILNLL 329
Query: 871 XSTCQMMFFSATYGTAVMQLLR 936
T Q FSAT V L R
Sbjct: 330 PKTRQTSLFSATQSAKVEDLAR 351
>UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase
Dbp45A; n=5; Endopterygota|Rep: Probable ATP-dependent
RNA helicase Dbp45A - Drosophila melanogaster (Fruit
fly)
Length = 521
Score = 70.5 bits (165), Expect = 8e-11
Identities = 56/186 (30%), Positives = 84/186 (45%), Gaps = 3/186 (1%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L L P L+K + G + IQ Q +++G+GKT AF L L
Sbjct: 9 FQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAG--QDCIGAAKTGSGKTFAFALPIL 66
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG-EELPRGSKITD- 711
R+ L L+PT+ELA Q E +A +++ G +++ K+
Sbjct: 67 ERLSEEPVSHFALVLTPTHELAYQISE-QFLVAGQAMGVRVCVVSGGTDQMVESQKLMQR 125
Query: 712 -HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQM 888
HI++ PG++ D F +K V+DEAD M+N + I I +CL T Q
Sbjct: 126 PHIVVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRMLNGDFDESLSI-IERCLPKTRQN 184
Query: 889 MFFSAT 906
+FFSAT
Sbjct: 185 LFFSAT 190
>UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellular
organisms|Rep: ATP-dependent RNA helicase -
Bradyrhizobium japonicum
Length = 500
Score = 70.1 bits (164), Expect = 1e-10
Identities = 60/190 (31%), Positives = 92/190 (48%), Gaps = 6/190 (3%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
+F L L +L V A G+ P+ IQ AQ+ GTGKTAAFVL
Sbjct: 2 SFSNLGLSEKVLAAVAATGYTTPTPIQEQAIPHVLARKDVLGIAQT--GTGKTAAFVLPM 59
Query: 535 LSRVDSNK---XYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL-PRGSK 702
L+ ++ + P+ L L PT ELA Q E + ++ + + G + +K
Sbjct: 60 LTILEKGRARARMPRTLILEPTRELAAQVKENFDRYGA-GQKLNVALLIGGVSFGDQDAK 118
Query: 703 ITD--HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXS 876
+T +LI TPG++ D + G+ G +++ V+DEAD M++ G RI K +
Sbjct: 119 LTRGVDVLIATPGRLLDHTERGGLLLTG-VELLVIDEADRMLD-MGFIPDIERICKLVPF 176
Query: 877 TCQMMFFSAT 906
T Q +FF+AT
Sbjct: 177 TRQTLFFTAT 186
>UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=55; Lactobacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 449
Score = 70.1 bits (164), Expect = 1e-10
Identities = 54/189 (28%), Positives = 93/189 (49%), Gaps = 5/189 (2%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
+F P + + + GF P+++Q + QSQ+G+GKT F+L
Sbjct: 3 SFKQFQFQPFINEALAEKGFEEPTEVQEKLIPIIKKG--KSVIGQSQTGSGKTHTFLLPL 60
Query: 535 LSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFC-PEIKLKYAVRGEELPRG-SKI- 705
+ +V Q++ +P+ ELA Q + A ++A+F PEI++ V G + R +K+
Sbjct: 61 MDKVKPTIDEVQIVITAPSRELANQIYQEAQQLARFSQPEIRVSNFVGGTDKQRQLNKLK 120
Query: 706 --TDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXST 879
H++IGTPG++ D + + FV+DEAD+ ++ G + +I L
Sbjct: 121 HQQPHVVIGTPGRILDM-MNEQALKVHTAFAFVVDEADMTLD-MGFLAEVDQIAGRLPEK 178
Query: 880 CQMMFFSAT 906
QM+ FSAT
Sbjct: 179 LQMLVFSAT 187
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 70.1 bits (164), Expect = 1e-10
Identities = 61/200 (30%), Positives = 92/200 (46%), Gaps = 8/200 (4%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
+F L L +L++ + G+ P+ IQ AQ+ GTGKTAAF L
Sbjct: 7 SFKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDLCGIAQT--GTGKTAAFALPS 64
Query: 535 LSRVDSN-KXYPQ----VLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGS 699
+ + +N + PQ +L LSPT ELA Q + + + G + R
Sbjct: 65 IHYLATNPQARPQRGCRMLILSPTRELASQIARACNDYTRHL-RMSVNAVFGGVPIGRQM 123
Query: 700 KITDH---ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCL 870
++ D IL+ TPG++ D + + ++VFVLDEAD M++ G RI K L
Sbjct: 124 RMLDRGTDILVATPGRLLDL-IDQRALVLKDVEVFVLDEADQMLD-LGFIHALRRIDKLL 181
Query: 871 XSTCQMMFFSATYGTAVMQL 930
Q +FFSAT + +L
Sbjct: 182 PKNRQTLFFSATMPKTIQEL 201
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 69.7 bits (163), Expect = 1e-10
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 4/189 (2%)
Frame = +1
Query: 382 NLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXLSRVDSNKX 561
++L + G+ P+ IQ + Q+Q+GTGKTAAF L + ++ NK
Sbjct: 61 SILNSLSNKGYKNPTPIQKAAIPELMLG--RDLLGQAQTGTGKTAAFALPLIEKLADNKE 118
Query: 562 Y-PQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPR---GSKITDHILIGT 729
+VL ++PT ELA Q E + K G + K +++GT
Sbjct: 119 LNAKVLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYRNQIYALKRKVDVVVGT 178
Query: 730 PGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQMMFFSATY 909
PG++ D ++ G F + I VLDEAD M+N G I L QM+ FSAT
Sbjct: 179 PGRIMD-HIRQGTFKVNSINCLVLDEADEMLN-MGFLEDIEWIIDQLPKNKQMVLFSATM 236
Query: 910 GTAVMQLLR 936
+ + +
Sbjct: 237 PNEIRNIAK 245
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 69.7 bits (163), Expect = 1e-10
Identities = 62/201 (30%), Positives = 92/201 (45%), Gaps = 8/201 (3%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L L P L+ V G+ + IQ Q +Q+GTGKTAAF L +
Sbjct: 4 FSELGLSPTTLQAVADTGYTTATPIQAAAIPVALAG--QDVLGIAQTGTGKTAAFTLPLI 61
Query: 538 SRVDSNK---XYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYA--VRGEELPRGSK 702
++ + + P+ L ++PT ELA Q VA+ K+ KL +A + G K
Sbjct: 62 DKLMNGRAKARMPRALVIAPTRELADQ---VASSFEKYAKGTKLSWALLIGGVSFGDQEK 118
Query: 703 ITDH---ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLX 873
D +LI TPG++ D + G M ++ V+DEAD M++ G RI K
Sbjct: 119 KLDRGVDVLIATPGRLLD-HFERGKLLMTGVQFLVVDEADRMLD-MGFIPDIERIFKMTP 176
Query: 874 STCQMMFFSATYGTAVMQLLR 936
Q +FFSAT + +L +
Sbjct: 177 PKKQTLFFSATMPPEITRLTK 197
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 69.7 bits (163), Expect = 1e-10
Identities = 67/202 (33%), Positives = 92/202 (45%), Gaps = 8/202 (3%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
+F L L +LK + G+ PS IQ Q A +Q+GTGKTA F L
Sbjct: 6 SFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEG--QDVMAAAQTGTGKTAGFTLPL 63
Query: 535 LSRVD--SNKXYPQV--LCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL-PRGS 699
L + N QV L L+PT ELA Q E + +K G ++ P+
Sbjct: 64 LEILSKGENAQSNQVRALVLTPTRELAAQVAESVKNYGQHL-SLKSTVVFGGVKINPQMM 122
Query: 700 KIT--DHILIGTPGKMFD-WGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCL 870
+ ILI TPG+M D + K FD K++V VLDEAD M++ G +I L
Sbjct: 123 ALRRGADILIATPGRMMDLYNQKAVRFD--KLEVLVLDEADRMLD-MGFIHDIKKILAIL 179
Query: 871 XSTCQMMFFSATYGTAVMQLLR 936
Q + FSAT+ + QL +
Sbjct: 180 PKKRQNLLFSATFSPEIRQLAK 201
>UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia
intestinalis|Rep: GLP_15_13424_14974 - Giardia lamblia
ATCC 50803
Length = 516
Score = 69.7 bits (163), Expect = 1e-10
Identities = 58/192 (30%), Positives = 92/192 (47%), Gaps = 8/192 (4%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F +L +L+ + + GF +PS +Q + Q++SG GKTA FVL+ L
Sbjct: 130 FSDFNLREEVLQAIISNGFESPSDVQSMAIPPALEH--KDVICQAKSGKGKTAVFVLSLL 187
Query: 538 SRVDSNKX--YPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKY--AVRGEELP---RG 696
+D Q L L T+ELA+Q + + A P+IK K A+ G + R
Sbjct: 188 HMIDPQAAPHKVQALVLCNTHELAMQIYKEFTRFAINLPDIKDKILCAIGGVTVSLHVRA 247
Query: 697 SKITD-HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLX 873
K D I +GT G++ D V+ G D+ IK VLDE D + + + + + +
Sbjct: 248 LKSKDVSIAVGTIGRVSDL-VERGALDLSFIKYLVLDEFDALFKEEDNFKKIAGLISKMP 306
Query: 874 STCQMMFFSATY 909
+T Q + F+AT+
Sbjct: 307 ATHQTLLFTATF 318
>UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 1091
Score = 69.7 bits (163), Expect = 1e-10
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 7/200 (3%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F ++ L NLLK + GF P+ IQ +++G+GKT AFV+ +
Sbjct: 232 FQSMDLTKNLLKAILKKGFNVPTPIQRKSIPMILDG--HDIVGMARTGSGKTGAFVIPMI 289
Query: 538 SRVDSNKXYPQV--LCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITD 711
++ + V + LSPT ELAIQT +V ++ +++ V G+ + + TD
Sbjct: 290 QKLGDHSTTVGVRAVILSPTRELAIQTFKVVKDFSQ-GTQLRTILIVGGDSME--DQFTD 346
Query: 712 -----HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXS 876
I+I TPG++ ++ GM + K++ V DEAD + G Q I L
Sbjct: 347 LARNPDIIIATPGRLMHHLLETGM-SLSKVQYIVFDEADRLF-EMGFNEQLTEILSKLSE 404
Query: 877 TCQMMFFSATYGTAVMQLLR 936
Q + FSAT + ++ +R
Sbjct: 405 NRQTLLFSATLPSLLVDFVR 424
>UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DRS1 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 808
Score = 69.7 bits (163), Expect = 1e-10
Identities = 62/203 (30%), Positives = 96/203 (47%), Gaps = 9/203 (4%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
+F A++L LL+ + + F AP+ IQ + + +G+GKTAAF++
Sbjct: 223 SFTAMNLSRPLLRALTSLQFTAPTPIQARAIPLALLG--RDILGSAVTGSGKTAAFMVPI 280
Query: 535 LSRV---DSNKXYP--QVLCLSPTYELAIQTGEVAAKMA-KFCPEIKLKYAVRGEELPRG 696
L R+ D K +VL L PT ELA+Q V +A K +++ V G L
Sbjct: 281 LERLCYRDRGKGGAACRVLVLCPTRELAVQCEAVGKALAEKGGLDVRFALLVGGLSLNAQ 340
Query: 697 S---KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKC 867
+ + ILI TPG++ D F + + V V+DEAD M+ G + I K
Sbjct: 341 AHTLRTLPDILIATPGRLIDHLTNTPSFTLSALDVLVIDEADRML-EAGFTDELEEIIKA 399
Query: 868 LXSTCQMMFFSATYGTAVMQLLR 936
+ Q M FSAT +V +L++
Sbjct: 400 CPRSRQTMLFSATMTDSVDELVK 422
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 69.3 bits (162), Expect = 2e-10
Identities = 53/191 (27%), Positives = 96/191 (50%), Gaps = 4/191 (2%)
Frame = +1
Query: 373 LXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXLSRVDS 552
L LL G+ G+ PS IQ + A++++GTGK+ A+++ L R+D
Sbjct: 89 LKRELLIGIFEMGWE-PSSIQEESIPIALSG--RDILARAKNGTGKSGAYLIPLLERLDL 145
Query: 553 NKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKI----TDHIL 720
K Q + + PT ELA+Q ++ +++K K+ G L R + T H++
Sbjct: 146 KKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNL-RDDVMRLDDTGHVV 204
Query: 721 IGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQMMFFS 900
I TPG++ D +K + + +++ VLDEAD ++++ Q I L Q++ +S
Sbjct: 205 IATPGRILDL-IKKCLEKVDHVQMVVLDEADKLLSQDFVQIMEAFI-LTLPKNRQILLYS 262
Query: 901 ATYGTAVMQLL 933
AT+ +V + +
Sbjct: 263 ATFPLSVQKFM 273
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 69.3 bits (162), Expect = 2e-10
Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 2/194 (1%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF L L +L + F ++IQ + +S +GTGKTA+FVL
Sbjct: 2 TFKELQLSDKVLVALEKANFNEATEIQARAIPLFLEG--KNIFGKSSTGTGKTASFVLPI 59
Query: 535 LSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL-PRGSKITD 711
L +++ NK Q + ++PT ELA+Q + + + G ++ + ++ D
Sbjct: 60 LEKIEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRIENLVIAPLIGGADMRDQIKRLKD 119
Query: 712 -HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQM 888
I++GTPG++ D + + ++ +LDEAD M+ + G + + + + + Q+
Sbjct: 120 SQIVVGTPGRVND-HLNRKTLKLDDVRTIILDEADEML-KMGFKNEIDALFERVSPDVQI 177
Query: 889 MFFSATYGTAVMQL 930
FSAT VMQ+
Sbjct: 178 GLFSATTSPKVMQI 191
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 69.3 bits (162), Expect = 2e-10
Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 4/154 (2%)
Frame = +1
Query: 487 QSQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPE-IKLK 663
QSQ+GTGKT +F+L + V+ Q + ++PT ELA Q E + P+ IK
Sbjct: 45 QSQTGTGKTLSFLLPIVQNVNPELQEMQAIIVAPTRELAWQIHEELKSILVKQPDYIKTS 104
Query: 664 YAVRGEELPR---GSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQG 834
G + R K++ I+IGTPG++ D K +K +++DEAD M++ G
Sbjct: 105 LITGGMDRERQIGRVKVSPQIVIGTPGRILDL-FKEQALKPHFVKHYIIDEADQMLD-MG 162
Query: 835 HQXQCIRIHKCLXSTCQMMFFSATYGTAVMQLLR 936
+ RI + L QMM FSAT + L+
Sbjct: 163 FLPEVDRIAQALPEKLQMMVFSATIPEKLQPFLK 196
>UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=2;
Clostridium difficile|Rep: Putative ATP-dependent RNA
helicase - Clostridium difficile (strain 630)
Length = 381
Score = 69.3 bits (162), Expect = 2e-10
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 5/173 (2%)
Frame = +1
Query: 349 VKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVL 528
+ TF L + L+ G+ +P+++Q + SQ+GTGKT A++L
Sbjct: 1 MNTFEQLKISSTLIDGLKKQDITSPTEVQSLVIGNIIQN--KDLLINSQTGTGKTLAYLL 58
Query: 529 AXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGE-----ELPR 693
++D++K Q L L+PT+EL +Q +AK A+ GE ++
Sbjct: 59 PIFEKIDTSKRETQALILAPTHELVMQITNQVELLAKNAELSVTSLALIGEVNIQKQIKN 118
Query: 694 GSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCI 852
+ HI+IG+ G++ D +K IK VLDE D ++N G CI
Sbjct: 119 IKAVKPHIVIGSCGRVLDL-IKQKKLKSHNIKTIVLDEVDNLLN--GKNITCI 168
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 69.3 bits (162), Expect = 2e-10
Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 3/187 (1%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L L +L + G+ P+ IQ Q ++++GTGKTAAF + L
Sbjct: 7 FQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQG--QDALVRAKTGTGKTAAFAIPAL 64
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITDH- 714
+ + +PQVL L+P EL Q + K+ K ++ G +L G K + H
Sbjct: 65 QHLRAEVQHPQVLILTPGRELCKQISQEFIKLGKGLENFRVAEVTGGGKL-SGVKKSLHG 123
Query: 715 --ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQM 888
++ TPG++ D + G+ + I + V+DEAD + + G + I K L + Q
Sbjct: 124 AQVISATPGRLIDIKEQ-GLLNSNCINMLVIDEADRLFD-MGFREAVTSILKDLPKSVQT 181
Query: 889 MFFSATY 909
+ SAT+
Sbjct: 182 VLCSATF 188
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 69.3 bits (162), Expect = 2e-10
Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 9/201 (4%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
+F +L L P++L+ V G+ P+ IQ + A +Q+GTGKTA F L
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEG--RDLMASAQTGTGKTAGFTLPL 59
Query: 535 LSRVDSNKXYP------QVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL-PR 693
L + + + + + L L+PT ELA Q GE +K+ I+ G + P+
Sbjct: 60 LQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQ 118
Query: 694 GSKITD--HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKC 867
K+ +L+ TPG++ D + + ++++ VLDEAD M++ G R+
Sbjct: 119 MMKLRGGVDVLVATPGRLLDLEHQ-NAVKLDQVEILVLDEADRMLD-MGFIHDIRRVLTK 176
Query: 868 LXSTCQMMFFSATYGTAVMQL 930
L + Q + FSAT+ + L
Sbjct: 177 LPAKRQNLLFSATFSDDIKAL 197
>UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Pseudomonas putida (strain KT2440)
Length = 398
Score = 69.3 bits (162), Expect = 2e-10
Identities = 53/170 (31%), Positives = 90/170 (52%), Gaps = 13/170 (7%)
Frame = +1
Query: 472 QXXXAQSQSGTGKTAAFVLAXLSRVDS----NKXY---PQVLCLSPTYELAIQTGEVAAK 630
Q ++Q+GTGKTAAF+++ +S++ + Y P+ L ++PT EL +Q + AA
Sbjct: 47 QDAIGRAQTGTGKTAAFLISIISQLQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAA 106
Query: 631 MAKFCPEIKLKYAVRGEELPRGSKITD----HILIGTPGKMFDWGVKFGMFDMGKIKVFV 798
+ K+ + + V G + + K + IL+ TPG++ D+ + G + ++V V
Sbjct: 107 LTKY-TGLNVMSFVGGMDFDKQLKALEARHCDILVATPGRLLDFNQR-GEVHLDMVEVMV 164
Query: 799 LDEADVMINRQGHQXQCIRIHKCL--XSTCQMMFFSATYGTAVMQLLR*W 942
LDEAD M++ G Q +I + S Q + FSAT+ VM L + W
Sbjct: 165 LDEADRMLD-MGFIPQVRQIIRQTPPKSERQTLLFSATFTDDVMNLAKQW 213
>UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22;
Gammaproteobacteria|Rep: ATP-dependent RNA helicase rhlB
- Pseudomonas aeruginosa
Length = 397
Score = 69.3 bits (162), Expect = 2e-10
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 13/208 (6%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F +L P+L+ + GF + IQ Q ++Q+GTGKTAAF+++ +
Sbjct: 11 FHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRG--QDAIGRAQTGTGKTAAFLISII 68
Query: 538 SRV----DSNKXY---PQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRG 696
+++ + Y P+ L ++PT EL +Q + AA + K+ + + V G + +
Sbjct: 69 TQLLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKY-TGLNVMTFVGGMDFDKQ 127
Query: 697 SKITD----HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHK 864
K + IL+ TPG++ D+ + G + ++V VLDEAD M++ G Q +I +
Sbjct: 128 LKQLEARFCDILVATPGRLLDFNQR-GEVHLDMVEVMVLDEADRMLD-MGFIPQVRQIIR 185
Query: 865 CL--XSTCQMMFFSATYGTAVMQLLR*W 942
Q + FSAT+ VM L + W
Sbjct: 186 QTPHKGERQTLLFSATFTDDVMNLAKQW 213
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 68.9 bits (161), Expect = 2e-10
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Frame = +1
Query: 487 QSQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKY 666
Q+++GTGKT AFVL L ++D Q L ++PT ELA+Q KM +I +
Sbjct: 48 QAKTGTGKTLAFVLPILEKIDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLA 107
Query: 667 AVRGEELP---RGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGH 837
G+++ R K HI++ TPG++ D ++ D+ + VLDEAD M+ G
Sbjct: 108 IYGGQDVAQQLRKLKGNTHIVVATPGRLLD-HIRRETIDLSNLSTIVLDEADQML-YFGF 165
Query: 838 QXQCIRIHKCLXSTCQMMFFSATYGTAVMQLLR 936
I + Q M FSAT + +L +
Sbjct: 166 LYDIEDILDETPGSKQTMLFSATIPKDIKKLAK 198
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 68.9 bits (161), Expect = 2e-10
Identities = 60/198 (30%), Positives = 93/198 (46%), Gaps = 6/198 (3%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF + LL + + GF P+ IQ A +Q+GTGKTAA++L
Sbjct: 2 TFNDFNFNSGLLDSLSSMGFNKPTPIQTEAIPVIMSN--SDLVACAQTGTGKTAAYMLPI 59
Query: 535 LSR-VDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL---PRGSK 702
L + ++SN L L PT ELAIQ + + F + G+ +
Sbjct: 60 LHKIIESNTDSLDTLVLVPTRELAIQIDQQIEGFSYFINVSSIAVYGGGDGATWDQQRKA 119
Query: 703 ITD--HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXS 876
+TD +I+I TPG++ ++ G ++ +IK VLDEAD M++ G +R+ L +
Sbjct: 120 LTDGANIVIATPGRLLA-QLQSGTANLKQIKHLVLDEADRMLD-MGFYDDIVRVISYLPT 177
Query: 877 TCQMMFFSATYGTAVMQL 930
Q + FSAT T + L
Sbjct: 178 ERQTIMFSATMPTKMRAL 195
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 68.9 bits (161), Expect = 2e-10
Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 7/201 (3%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
+F +L L + K V G+ PS IQ + A +Q+GTGKTA F L
Sbjct: 2 SFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTG--KDVMAAAQTGTGKTAGFTLPL 59
Query: 535 LSRVD-SNKXYP---QVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL-PRGS 699
L + NK + L L+PT ELA Q E K+ P ++ G + P+
Sbjct: 60 LELLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLP-LRSAVVFGGVPINPQIQ 118
Query: 700 KITD--HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLX 873
K+ +L+ TPG++ D V+ + ++++ VLDEAD M++ G +I L
Sbjct: 119 KLRHGVDVLVATPGRLLDL-VQQNVVKFNQLEILVLDEADRMLD-MGFIRDIKKILALLP 176
Query: 874 STCQMMFFSATYGTAVMQLLR 936
+ Q + FSAT+ + +L +
Sbjct: 177 AKRQNLMFSATFSDEIRELAK 197
>UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH box
family protein; n=16; Staphylococcus|Rep: ATP-dependent
RNA helicase DEAD/DEAH box family protein -
Staphylococcus aureus (strain Newman)
Length = 448
Score = 68.9 bits (161), Expect = 2e-10
Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 3/159 (1%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F +L +L+ V F P++IQ QSQ+GTGK+ AF+L +
Sbjct: 6 FEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKRTN--LIGQSQTGTGKSHAFLLPLM 63
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSK---IT 708
+DS PQ + ++PT ELA Q + A +++F + +K + G ++ + +
Sbjct: 64 QLIDSEIKEPQAIVVAPTRELAQQLYDAANHLSQFKAGVSVKVFIGGTDIEKDRQRCNAQ 123
Query: 709 DHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMIN 825
++IGTP ++ D K G + V+DEAD+MI+
Sbjct: 124 PQLIIGTPTRINDL-AKTGHLHVHLASYLVIDEADLMID 161
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 68.9 bits (161), Expect = 2e-10
Identities = 50/195 (25%), Positives = 97/195 (49%), Gaps = 5/195 (2%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F +L L LL G+ GF + +Q + A++++GTGKT +F++ L
Sbjct: 23 FSSLGLKQELLMGLTQEGFQQLTPVQELAIPHILAR--RDVVARAKNGTGKTGSFLIPIL 80
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEI--KLKYAVRGEELPRG---SK 702
V+ K + Q L L T ELA+QT +VA ++K P++ ++ A+ G + ++
Sbjct: 81 QMVNPAKDHIQALVLLHTRELAMQTAKVAKTLSKNMPDVTGRIMCAIGGVSIAEDRERAR 140
Query: 703 ITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTC 882
+++ TPG++ + + + + VLDEAD+++++ + + C
Sbjct: 141 EKPLVVLATPGRLQQL-IDEEILNFRDCSIVVLDEADMLLSQNFIRSIENCLAACSNKRR 199
Query: 883 QMMFFSATYGTAVMQ 927
Q +FFSAT+ ++ +
Sbjct: 200 QTLFFSATFSNSLKE 214
>UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1;
Picrophilus torridus|Rep: ATP-dependent RNA helicase -
Picrophilus torridus
Length = 387
Score = 68.9 bits (161), Expect = 2e-10
Identities = 48/166 (28%), Positives = 82/166 (49%)
Frame = +1
Query: 409 GFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSP 588
GF P+++Q + +S +G+GKTAAF++ + R +K + VL + P
Sbjct: 23 GFYEPTEVQGLAIPEILSG--RDVVIKSMTGSGKTAAFLIPAIQRALGSKFFNTVLIILP 80
Query: 589 TYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITDHILIGTPGKMFDWGVKFGM 768
T ELA+QT VA +++ + Y E I+IGTPG++ D + +
Sbjct: 81 TRELALQTYSVALNISRNFFRTTVVYGGSSMEKQIHDLRDSKIIIGTPGRIIDL-INRDL 139
Query: 769 FDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQMMFFSAT 906
++ + +F+LDEAD+M++ G +I + L Q + SAT
Sbjct: 140 LNLEHVGMFILDEADMMLD-MGFIDDIYKIIENLPEKRQNVLASAT 184
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 68.5 bits (160), Expect = 3e-10
Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 2/177 (1%)
Frame = +1
Query: 385 LLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXLSRVDSNKXY 564
+L G+ GF PS IQ A+S GTGKT F + L +D +
Sbjct: 7 ILDGLSVCGFQRPSPIQLKAIPLGRCGFDLIMRAKS--GTGKTLVFCIISLEMIDIDISS 64
Query: 565 PQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITDH--ILIGTPGK 738
QVL L+PT E+A+Q +V + + ++K++ + G + K ++ I +G PG+
Sbjct: 65 VQVLILAPTREIAVQIAQVFSSVGCEIKDLKVEVFIGGLAIENDKKKVNNCQIAVGAPGR 124
Query: 739 MFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQMMFFSATY 909
+ + G + +++FVLDEAD ++ Q I L + Q++ SATY
Sbjct: 125 IRHL-IDKGFLKVENVRLFVLDEADKLM-ETSFQKDINYIFSKLPLSKQVIASSATY 179
>UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2;
Bacillaceae|Rep: ATP-dependent RNA helicase -
Oceanobacillus iheyensis
Length = 432
Score = 68.5 bits (160), Expect = 3e-10
Identities = 59/189 (31%), Positives = 90/189 (47%), Gaps = 6/189 (3%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L L P + + F P++IQ QS++G+GKT AF+L
Sbjct: 3 FEDLQLNPIVNDVIEQLKFKNPTEIQEKVIPAIIKG--DSVVGQSRTGSGKTHAFLLPLF 60
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQT-GEV--AAKMAKFCPEIKLKYAVRG---EELPRGS 699
++S+K Q + +PT ELA Q GEV +A E K V G +++
Sbjct: 61 HGLESDKKEVQFVITAPTRELATQLYGEVRNIITLADKTKEWNAKLLVGGTDKQKMTEKL 120
Query: 700 KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXST 879
K HI++GTPG++ D VK G + K FV+DEAD+M++ G + ++
Sbjct: 121 KTPPHIIVGTPGRILDL-VKSGALSIYTAKSFVVDEADLMLD-LGFIEEVDQLLVRSKQD 178
Query: 880 CQMMFFSAT 906
Q++ FSAT
Sbjct: 179 IQLLVFSAT 187
>UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinomonas sp. MWYL1|Rep: DEAD/DEAH box helicase
domain protein - Marinomonas sp. MWYL1
Length = 452
Score = 68.5 bits (160), Expect = 3e-10
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 13/218 (5%)
Frame = +1
Query: 328 PXSPLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTG 507
P + + F L+L ++K + GF S+IQ Q+Q+GTG
Sbjct: 63 PVAEVEGKMRFHDLNLPDRVIKSIAEMGFEYCSEIQAETLPMTLLGYD--IIGQAQTGTG 120
Query: 508 KTAAFVLAXLS-------RVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKY 666
KTAAF++A +S + + L ++PT ELAIQ + A K+ C + +
Sbjct: 121 KTAAFLIAMISDFLDYPLEEKRANNFARGLIIAPTRELAIQIADEAVKLTSNC-HLNVVT 179
Query: 667 AVRG--EELPRGSKITDH--ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQG 834
V G E + + T++ IL+ TPG++ D+ + +GK++ VLDEAD M++ G
Sbjct: 180 LVGGLSYEKQKIALETENVDILVATPGRLLDF-ARSRKVQLGKVECLVLDEADRMLS-MG 237
Query: 835 HQXQCIRIHKCL--XSTCQMMFFSATYGTAVMQLLR*W 942
I + T Q M FSAT+ + L + W
Sbjct: 238 FIPDVKSIIRMTPHKETRQTMLFSATFPKDIQALAQQW 275
>UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase DBP4 -
Chaetomium globosum (Soil fungus)
Length = 825
Score = 68.5 bits (160), Expect = 3e-10
Identities = 63/220 (28%), Positives = 102/220 (46%), Gaps = 7/220 (3%)
Frame = +1
Query: 298 QLALAIQRXAPXSPLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQX 477
+L AI+ P SP ++K F L L G+ A F + +Q +
Sbjct: 37 KLKAAIEELDPKSP--AIKQFTDLPLCEATASGLRASHFEVLTDVQRAAIPLALKG--RD 92
Query: 478 XXAQSQSGTGKTAAFVLAXLSRVDSNKXYPQ----VLCLSPTYELAIQTGEVAAKMAK-- 639
+++G+GKT AF++ L ++ K L +SPT ELA+Q EV K+ +
Sbjct: 93 ILGAAKTGSGKTLAFLVPVLEKLYHAKWTEYDGLGALIISPTRELAVQIFEVLRKIGRNH 152
Query: 640 -FCPEIKLKYAVRGEELPRGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADV 816
F + + EE R ++ +IL+ TPG+M + FD+ +++ VLDEAD
Sbjct: 153 FFSAGLVIGGKSLKEEAERLGRM--NILVCTPGRMLQHLDQTANFDVNNLQILVLDEADR 210
Query: 817 MINRQGHQXQCIRIHKCLXSTCQMMFFSATYGTAVMQLLR 936
+++ G Q + + L +T Q + FSAT V L R
Sbjct: 211 IMD-MGFQSAVDALVEHLPTTRQTLLFSATQSKRVSDLAR 249
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 68.1 bits (159), Expect = 4e-10
Identities = 60/203 (29%), Positives = 96/203 (47%), Gaps = 11/203 (5%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF L +LK + G+ P+ IQ + +Q+GTGKTA+F L
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSG--RDVMGAAQTGTGKTASFSLPI 69
Query: 535 LSRV-------DSNKXYP-QVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL- 687
+ R+ S +P + L L+PT ELA Q AK P ++ G ++
Sbjct: 70 IQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTP-LRSAVVFGGVDMN 128
Query: 688 PRGSKITD--HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIH 861
P+ +++ ILI TPG++ D V+ ++G++++ VLDEAD M++ G RI
Sbjct: 129 PQMAELRRGVEILIATPGRLLD-HVQQKTANLGQVQILVLDEADRMLD-MGFLPDLQRIL 186
Query: 862 KCLXSTCQMMFFSATYGTAVMQL 930
L Q + FSAT+ + +L
Sbjct: 187 NLLPKERQTLLFSATFSPEIKKL 209
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 68.1 bits (159), Expect = 4e-10
Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 6/190 (3%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF L L P LL + + P+ IQ + A + +GTGKTAAFVL
Sbjct: 2 TFEELDLDPKLLTAIEEQHYHKPTPIQAEAIPEMLLS--KDVLAGAATGTGKTAAFVLPA 59
Query: 535 LS-RVDSNKXY--PQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKI 705
L +D + P+VL L+PT ELA Q +V ++ CP + G + +I
Sbjct: 60 LQFLLDDPRPSRKPRVLILAPTRELAFQIHKVVKQLGAHCP-FESNVVTGGFASDKQLEI 118
Query: 706 TD---HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXS 876
IL+ TPG++ + K D+ I++ ++DEAD M++ G + + + +
Sbjct: 119 LQSKIDILVATPGRLLNIMSK-EFIDLSDIELLIIDEADRMLD-MGQGPDVLALIEAIPG 176
Query: 877 TCQMMFFSAT 906
Q FSAT
Sbjct: 177 DFQAACFSAT 186
>UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=1; Exiguobacterium sibiricum
255-15|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Exiguobacterium sibiricum 255-15
Length = 391
Score = 68.1 bits (159), Expect = 4e-10
Identities = 48/143 (33%), Positives = 72/143 (50%), Gaps = 3/143 (2%)
Frame = +1
Query: 487 QSQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKY 666
++ +GTGKT A+V+ L +D N+ + QV+ +PT EL +Q +V ++ IK
Sbjct: 40 EAPTGTGKTLAYVIPALELIDENEPHIQVVITAPTRELVMQIHQVIQLFSQ-GSGIKSGA 98
Query: 667 AVRGEELPRGS---KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGH 837
+ G EL R K I++GTPG++ + + M K+K+ VLDEAD I G
Sbjct: 99 FIGGVELKRQHERLKKKPQIIVGTPGRLVEL-IDSKKMKMHKVKLIVLDEAD-QIYESGM 156
Query: 838 QXQCIRIHKCLXSTCQMMFFSAT 906
RI Q+ F SAT
Sbjct: 157 SASATRIANSALRDRQLAFISAT 179
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 68.1 bits (159), Expect = 4e-10
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 3/195 (1%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
+F + + P ++ GV A G+ P+ IQ AQ+ GTGKTAA+ L
Sbjct: 2 SFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQT--GTGKTAAYALPI 59
Query: 535 LSRVDSN-KXYPQVLCLSPTYELAIQTGEVAAKMAKFC--PEIKLKYAVRGEELPRGSKI 705
+ ++ S + + L ++PT ELA Q + + + E + V ++ R +
Sbjct: 60 IQKMLSTPRGRVRTLVIAPTRELACQISDSFRSLGQRARIRECSIYGGVNMDQQIRRLRS 119
Query: 706 TDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQ 885
+++ PG++ D + G D+ ++ ++DEAD M + G Q I KCL Q
Sbjct: 120 GVDVVVACPGRLLD-HIWRGTIDVCGVETLIIDEADRMFD-MGFQPDIQSILKCLVQPHQ 177
Query: 886 MMFFSATYGTAVMQL 930
+ FSAT V +L
Sbjct: 178 TLLFSATMPPEVRKL 192
>UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 440
Score = 67.7 bits (158), Expect = 6e-10
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 12/204 (5%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
+F L ++L G+ G+ PS+IQ + QSQSG+GKT AF+L+
Sbjct: 26 SFQECKLNEDILDGINGMGYITPSQIQSYAIPIILKG--KNLVMQSQSGSGKTMAFLLST 83
Query: 535 LSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITDH 714
L ++ + QV+ + T ELA QT + ++ + ++ + G E I
Sbjct: 84 LQLINRKDPFCQVIIIVNTRELARQTASIFDELTELMDDVTRLLCLPGYE----GDIKSQ 139
Query: 715 ILIGTPG---KMFDWGVKFGMFDMGKIKVFVLDEADVMINRQ---------GHQXQCIRI 858
LIGT K + G++ F +K V+DEAD ++N + +Q C I
Sbjct: 140 YLIGTASSIYKTIEIGLQTNEFKPENVKFLVIDEADAILNTKLSPGSNGLSVYQSVC-EI 198
Query: 859 HKCLXSTCQMMFFSATYGTAVMQL 930
K + Q + SATY + +L
Sbjct: 199 KKIIPLNVQTILVSATYPDQMSKL 222
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 67.7 bits (158), Expect = 6e-10
Identities = 57/196 (29%), Positives = 89/196 (45%), Gaps = 3/196 (1%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L L +L++GV A G+ P+ +Q + A +Q+GTGKTAAF L L
Sbjct: 3 FSKLGLPSSLVRGVQAMGYVDPTPVQLRAIPVVLAG--RDLVASAQTGTGKTAAFALPVL 60
Query: 538 SRVDSNK-XYPQVLCLSPTYELAIQTGEVAAKMAKFCP-EIKLKYAVRGEELPRGS-KIT 708
+R+ ++ P+VL L PT EL Q +F + + G R +
Sbjct: 61 ARLGGHRPGGPRVLVLEPTRELGAQVETAFRDFGRFTDVRSTIIHGGVGYGKQRSDLRAG 120
Query: 709 DHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQM 888
I+I T G++ D+ +K + ++V +LDE D M++ G RI Q
Sbjct: 121 TDIVIATVGRLMDF-IKEKEIRLDSVEVLILDEVDRMLD-MGFINDVKRIVGLCPKQRQT 178
Query: 889 MFFSATYGTAVMQLLR 936
+FFSAT + + R
Sbjct: 179 LFFSATIPPEIEDVAR 194
>UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 387
Score = 67.7 bits (158), Expect = 6e-10
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 3/191 (1%)
Frame = +1
Query: 367 LHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXLSRV 546
L + P L + GF AP+ IQ + A+S +GTGKT A+++ L R+
Sbjct: 15 LKMKPFLQETWNRVGFTAPTPIQEEAIPLILEG--KDLIAESPTGTGKTLAYLIPILHRI 72
Query: 547 DSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPR---GSKITDHI 717
D Q + L+P++ELA+Q + K K I + + G + R K I
Sbjct: 73 DPESKAVQAVILAPSHELAMQIHQTIEKWTK-DNNISSEPLIGGANIKRQIENLKKRPQI 131
Query: 718 LIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQMMFF 897
++ T G++ + +K M ++K V+DE D++I + H I K Q++ F
Sbjct: 132 IVATTGRLLE-VIKLKKIKMHEVKTIVVDEFDILIAEE-HAENLKHIIKTTLKERQIVCF 189
Query: 898 SATYGTAVMQL 930
SAT Q+
Sbjct: 190 SATISENTEQI 200
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 67.7 bits (158), Expect = 6e-10
Identities = 63/198 (31%), Positives = 88/198 (44%), Gaps = 7/198 (3%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L +L+ + + AP++IQ + A +++GTGKTAAF L L
Sbjct: 3 FSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQG--KDILAGARTGTGKTAAFALPIL 60
Query: 538 SRVDS---NKXYPQ--VLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP--RG 696
++ S NK PQ VL L PT ELA Q + AK P L P +
Sbjct: 61 EKLSSKERNKKRPQTRVLVLVPTRELANQVTQNIKSYAKKLPFKTLPVFGGVSSYPQIQA 120
Query: 697 SKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXS 876
K I++ TPG++ D ++ + I V DEAD M + G +I K L
Sbjct: 121 LKSGIDIVVATPGRLLDLALQ-NALSLEHIDTLVFDEADRMFD-MGFIHDIKQIVKMLPE 178
Query: 877 TCQMMFFSATYGTAVMQL 930
Q + FSATY + VM L
Sbjct: 179 KRQNLLFSATYPSEVMSL 196
>UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46;
n=2; Caenorhabditis elegans|Rep: Putative
uncharacterized protein mel-46 - Caenorhabditis elegans
Length = 973
Score = 67.7 bits (158), Expect = 6e-10
Identities = 55/195 (28%), Positives = 88/195 (45%), Gaps = 2/195 (1%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF +L + L+ + F PS +Q + Q++SGTGKT F +
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLG--RDMLVQAKSGTGKTLVFSVLA 80
Query: 535 LSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP--RGSKIT 708
+ +DS + Q + ++PT E+++Q E K+A + +L +
Sbjct: 81 VENLDSRSSHIQKVIVTPTREISVQIKETVRKVAPTGARTSVYVGGSAHKLNLIDLKQTR 140
Query: 709 DHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQM 888
I+IGTPG++ VK G +M + FVLDEAD +++ I I+ L Q+
Sbjct: 141 PQIVIGTPGRIAQL-VKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINS-LPQIRQV 198
Query: 889 MFFSATYGTAVMQLL 933
FSATY + LL
Sbjct: 199 AVFSATYPRNLDNLL 213
>UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacillus cereus group|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 389
Score = 67.3 bits (157), Expect = 8e-10
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 3/158 (1%)
Frame = +1
Query: 472 QXXXAQSQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 651
Q A+S +GTGKT A++L L +++ PQV+ L+PT EL +Q E K E
Sbjct: 36 QDVIAESPTGTGKTLAYLLPLLHKINPEVKQPQVVVLAPTRELVMQIHEEVQKFTA-GTE 94
Query: 652 IKLKYAVRGEELPRG-SKITDH--ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMI 822
I + G ++ R K+ H +++G+PG++ + ++ M ++K V DE D ++
Sbjct: 95 ISGASLIGGADIKRQVEKLKKHPRVIVGSPGRILEL-IRMKKLKMHEVKTIVFDEFDQIV 153
Query: 823 NRQGHQXQCIRIHKCLXSTCQMMFFSATYGTAVMQLLR 936
+Q + K Q++FFSAT A R
Sbjct: 154 -KQKMMGAVQDVIKSTMRDRQLVFFSATMTKAAEDAAR 190
>UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: RNA
helicase - Lactobacillus acidophilus
Length = 453
Score = 67.3 bits (157), Expect = 8e-10
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 5/198 (2%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F + P L +G+ F P+K+Q Q+ +G+GKT A+++
Sbjct: 5 FEDSRINPALQEGLKKINFVKPTKVQEKVIPAMLSDLS--VVVQAATGSGKTHAYLVPIF 62
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFC-PEIKLKYAVRG----EELPRGSK 702
+ +D Y Q + P+ ELA Q +VA K+ + + G +L +
Sbjct: 63 NEIDEAAHYVQAIVTLPSRELADQLYQVARKLRDAAGMHFSIAHLAGGTDRERQLEKYQN 122
Query: 703 ITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTC 882
T ++I TPG++ D+ V+ +F + ++K FV+DEAD+ ++ G ++ +
Sbjct: 123 NTPQLVIATPGRLLDF-VQKKVFAVDQVKTFVIDEADMTLD-MGFLSDIDQVASKMPKDV 180
Query: 883 QMMFFSATYGTAVMQLLR 936
Q+ FSAT + LR
Sbjct: 181 QIAAFSATIPVKLSNFLR 198
>UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1;
Salinibacter ruber DSM 13855|Rep: ATP-dependent RNA
helicase - Salinibacter ruber (strain DSM 13855)
Length = 478
Score = 67.3 bits (157), Expect = 8e-10
Identities = 48/120 (40%), Positives = 67/120 (55%), Gaps = 7/120 (5%)
Frame = +1
Query: 487 QSQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCP-----E 651
QSQ+G+GKT AF+L V+ +K QVL L+PT ELA Q E +M P E
Sbjct: 84 QSQTGSGKTGAFLLPLFDLVNPDKEEQQVLILTPTRELARQIHEEFEQMKIATPRTNRME 143
Query: 652 IKLKYAVRGEELPR--GSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMIN 825
L Y G + P+ G K ++IGTPG++ D +K FD +++ VLDEAD M++
Sbjct: 144 AVLIYGGVGYQ-PQIDGLKNGAQVVIGTPGRILD-HIKKDNFDASTLRMLVLDEADEMLS 201
>UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase
DbpA; n=1; Candidatus Kuenenia stuttgartiensis|Rep:
Similar to ATP-independent RNA helicase DbpA -
Candidatus Kuenenia stuttgartiensis
Length = 407
Score = 67.3 bits (157), Expect = 8e-10
Identities = 59/196 (30%), Positives = 91/196 (46%), Gaps = 5/196 (2%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L L ++LK + G+ + IQ A +++G+GKTAA + +
Sbjct: 3 FSDLELSADILKALDKMGYNEMTPIQEATYPIIFAG--HDLCALAETGSGKTAACAIPLI 60
Query: 538 SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAV-----RGEELPRGSK 702
+VD + Q L + PT EL +Q E K+A I YAV R ++ R K
Sbjct: 61 QKVDPSLDAIQGLVIVPTRELCMQYVEEIRKIAAKTDVI--PYAVYGGFDRAAQIAR-VK 117
Query: 703 ITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTC 882
T HIL+ TPG++ D + G+ +IK +LDEAD ++ + G I C+
Sbjct: 118 QTVHILVATPGRLIDL-LYEGILSFARIKCVILDEADELL-KVGFLEDIEFILSCIRHKH 175
Query: 883 QMMFFSATYGTAVMQL 930
Q + FSAT + +L
Sbjct: 176 QTLLFSATMPDDIKKL 191
>UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=1;
Limnobacter sp. MED105|Rep: Putative ATP-dependent RNA
helicase - Limnobacter sp. MED105
Length = 617
Score = 67.3 bits (157), Expect = 8e-10
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
+F + L LL+ + A AP+ +Q SQ+G+GKT F+L
Sbjct: 2 SFDDMGLAAPLLQALNALNITAPTLVQQEVVPLGKDGGD--LMVSSQTGSGKTFGFLLPV 59
Query: 535 LSRVDSNKXY-------PQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPR 693
+ R+ + + P+ L L PT ELA Q + A + KF +++ V G +P
Sbjct: 60 MHRMMTGEQSPMEMLAGPECLVLCPTRELAQQVSQDAINLVKFTKGVRVATVVGG--MPY 117
Query: 694 GSKITD----HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIH 861
G ++ I++GTPG++ D + G ++ + ++DEAD M++ G I
Sbjct: 118 GKQMASLRGARIVVGTPGRLLDLAQQ-GKLNLSTVTTLIVDEADRMLD-LGFSEDLEAID 175
Query: 862 KCLXSTCQMMFFSATYGTAVMQL 930
+ + Q + FSAT+ ++ L
Sbjct: 176 QLCGNRIQTLMFSATFAKRIIGL 198
>UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Flavobacteria|Rep: DEAD/DEAH box helicase domain
protein - Flavobacterium johnsoniae UW101
Length = 450
Score = 67.3 bits (157), Expect = 8e-10
Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 4/203 (1%)
Frame = +1
Query: 349 VKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVL 528
+ TF +L +L K V GF P+ IQ AQ+ GTGKT A++L
Sbjct: 1 MSTFEKFNLPKSLQKAVDELGFVTPTPIQEKSFSVIMSGRDMMGIAQT--GTGKTFAYLL 58
Query: 529 AXLSRVD-SNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKI 705
L ++ P+++ L PT EL +Q E K+ K+ +K G + K
Sbjct: 59 PLLKLYKFTHTNTPKIVVLVPTRELVVQVVEEVEKLTKYM-SVKTLGIYGGVNINTQKKA 117
Query: 706 TDH---ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXS 876
IL+GTPG+ D + + + + V+DE D M+N G + Q + + +
Sbjct: 118 VYEGVDILVGTPGRTMDLALD-AVVRFDETQKLVIDEFDEMLN-LGFRPQLTSLFAMMKT 175
Query: 877 TCQMMFFSATYGTAVMQLLR*WF 945
Q + FSAT V +L +F
Sbjct: 176 KRQNILFSATMTDEVDDILNDYF 198
>UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1;
Marinobacter sp. ELB17|Rep: ATP-dependent RNA helicase -
Marinobacter sp. ELB17
Length = 463
Score = 67.3 bits (157), Expect = 8e-10
Identities = 63/210 (30%), Positives = 102/210 (48%), Gaps = 15/210 (7%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L+L L + + A GF + IQ Q Q+Q+GTGKTAAF++ +
Sbjct: 44 FSDLNLDHRLQQAIAAIGFEYCTPIQAETLPWTLAC--QDLIGQAQTGTGKTAAFLITAI 101
Query: 538 -----SRVDSNKXY---PQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPR 693
+ ++ +K + P+VL L+PT ELA+Q + A ++ K+ V G +
Sbjct: 102 QTMLETPIEDSKRFASEPRVLALAPTRELAMQIAKDAEQLCAHTGH-KVVTVVGGMHYDK 160
Query: 694 -----GSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIR- 855
+++ D IL+ TPG++ D+ +F + +I + +LDEAD M++ G R
Sbjct: 161 QRDQLQNEVVD-ILVATPGRLIDFLGSQDVF-LDQIDILILDEADRMLD-MGFIPDVKRI 217
Query: 856 IHKCL-XSTCQMMFFSATYGTAVMQLLR*W 942
I KC Q + FSAT+ V+ L W
Sbjct: 218 IRKCTPKEDRQTLLFSATFNQDVLNLASMW 247
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 67.3 bits (157), Expect = 8e-10
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 7/201 (3%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
+F +L L + K V G+ PS IQ + A +Q+GTGKTA F L
Sbjct: 2 SFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTG--KDVMAAAQTGTGKTAGFTLPL 59
Query: 535 LSRVD-SNKXYP---QVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL-PRGS 699
L + NK + L L+PT ELA Q E K+ P ++ G + P+
Sbjct: 60 LELLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLP-LRSAVVFGGVPINPQIQ 118
Query: 700 KITD--HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLX 873
K+ +L+ TPG++ D + + +++V VLDEAD M++ G +I L
Sbjct: 119 KLRHGVDVLVATPGRLLDLEQQKAV-KFNQLEVLVLDEADRMLD-MGFIRDIKKILAMLP 176
Query: 874 STCQMMFFSATYGTAVMQLLR 936
+ Q + FSAT+ + +L +
Sbjct: 177 AKRQNLMFSATFSDEIRELAK 197
>UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium hominis
Length = 868
Score = 67.3 bits (157), Expect = 8e-10
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 7/196 (3%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF + P LL+ + G+ P+ IQ + A +++G+GKTA FVL
Sbjct: 5 TFQSFGFSPKLLESIKIIGYSLPTPIQRKCFPSILAG--RDVVAMARTGSGKTAGFVLPM 62
Query: 535 LSRVD-SNKXYPQV--LCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVR-GEELPRGSK 702
+ R+ S+ + + LSPT ELA+QT V K+A C + A+ G L R +
Sbjct: 63 IERLGCSHSQIVGIRGVVLSPTRELALQTYRVVRKLA--CKTNLVVCALTGGSSLDRQFE 120
Query: 703 I---TDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLX 873
I++ TPG++F ++ G+ + +K+ +LDEAD + G Q +I + +
Sbjct: 121 SLSGNPDIVVATPGRLFHHIIEAGL-SLIAVKIIILDEADRLF-EMGLASQIEKILESIP 178
Query: 874 STCQMMFFSATYGTAV 921
Q + SAT TA+
Sbjct: 179 KNRQCVLVSATMPTAL 194
>UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Saccharomyces cerevisiae (Baker's yeast)
Length = 995
Score = 67.3 bits (157), Expect = 8e-10
Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 5/199 (2%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
+F + L +L + GF P+ IQ + +++G+GKTAAF+L
Sbjct: 138 SFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLILQS--RDIVGMARTGSGKTAAFILPM 195
Query: 535 LSRVDSN--KXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPR--GSK 702
+ ++ S+ K + + LSP+ ELA+QT V A+ E++ G+ L G
Sbjct: 196 VEKLKSHSGKIGARAVILSPSRELAMQTFNVFKDFAR-GTELRSVLLTGGDSLEEQFGMM 254
Query: 703 ITD-HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXST 879
+T+ ++I TPG+ V+ + D+ ++ V DEAD + G Q Q + L +T
Sbjct: 255 MTNPDVIIATPGRFLHLKVEMNL-DLKSVEYVVFDEADRLF-EMGFQEQLNELLASLPTT 312
Query: 880 CQMMFFSATYGTAVMQLLR 936
Q + FSAT +++ ++
Sbjct: 313 RQTLLFSATLPNSLVDFVK 331
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 66.9 bits (156), Expect = 1e-09
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 5/198 (2%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F ++ L + KGV G+ P+ IQ + A +++G+GKTAAF++
Sbjct: 39 FQSMGLSFPVFKGVMRKGYKVPTPIQRKTIPVILDG--KDVVAMARTGSGKTAAFLIPMF 96
Query: 538 SRVDSNKXYP--QVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL-PRGSKIT 708
R+ + + + L LSPT ELA+QT + ++ KF ++K + G+ + + + +
Sbjct: 97 ERLKAPQAQTGARALILSPTRELALQTMKFTKELGKF-TKLKTALILGGDSMDDQFAALH 155
Query: 709 DH--ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTC 882
++ I+IGTPG++ +K + ++ V DEAD + G Q I + T
Sbjct: 156 ENPDIIIGTPGRLMH-VIKEMNLKLQNVEYVVFDEADRLF-EMGFAEQLQEIIRRFPETR 213
Query: 883 QMMFFSATYGTAVMQLLR 936
Q + FSAT +++ R
Sbjct: 214 QTLLFSATLPKVIVEFAR 231
>UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 755
Score = 66.9 bits (156), Expect = 1e-09
Identities = 58/214 (27%), Positives = 90/214 (42%), Gaps = 7/214 (3%)
Frame = +1
Query: 310 AIQRXAPXSPLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQ 489
A+ + A + K F LHL L + A G+ P+ IQ + +
Sbjct: 134 AVVKGAKGDTTFDAKAFDELHLSRPLTRACEALGYKKPTPIQAAVIPIAMTG--RDVCGR 191
Query: 490 SQSGTGKTAAFVLAXLSRVDSNKXYP----QVLCLSPTYELAIQTGEVAAKMAKFCPEIK 657
+ +G+GKTAAF+L L R+ P VL L PT ELA+Q ++ +A+F I+
Sbjct: 192 AVTGSGKTAAFMLPQLERMLHRGPRPAAATHVLVLVPTRELAVQVHQMTESLAQFTT-IR 250
Query: 658 LKYAVRGEEL---PRGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINR 828
V G + I++ TPG++ D F + + +LDEAD ++
Sbjct: 251 AVLVVGGLSANVQAAALRTRPEIVVATPGRVIDHVRNTHSFGLEDLATLILDEADRLL-E 309
Query: 829 QGHQXQCIRIHKCLXSTCQMMFFSATYGTAVMQL 930
G + I + Q + FSAT V L
Sbjct: 310 MGFLEEIKEIVRQCPKKRQTLLFSATLTAGVEAL 343
>UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62;
Gammaproteobacteria|Rep: ATP-dependent RNA helicase rhlB
- Shewanella oneidensis
Length = 439
Score = 66.9 bits (156), Expect = 1e-09
Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 12/207 (5%)
Frame = +1
Query: 346 SVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFV 525
S + F L L P + + + GF + IQ + Q+Q+GTGKT AF+
Sbjct: 7 SNQKFADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQS--KDIAGQAQTGTGKTMAFL 64
Query: 526 LAXLSRVDSNK-------XYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEE 684
+A + + S+ P+ + ++PT ELAIQ + A +AK +K+ GE
Sbjct: 65 VATFNHLLSSSIPEGRQLNQPRAIIMAPTRELAIQIAKDAILLAKH-TRLKVGIVYGGES 123
Query: 685 LPRGSKITDH---ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIR 855
K+ D ILIGT G++ D+ V+ G+ ++ I+ VLDEAD M + G
Sbjct: 124 YDVQRKVLDQGVDILIGTTGRIIDY-VRQGIINLNAIQAVVLDEADRMFD-LGFIKDIRF 181
Query: 856 IHKCLXSTCQM--MFFSATYGTAVMQL 930
+ + + + Q M FSAT V +L
Sbjct: 182 LFRRMPNADQRLNMLFSATLSMKVQEL 208
>UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Yarrowia lipolytica (Candida lipolytica)
Length = 926
Score = 66.9 bits (156), Expect = 1e-09
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 5/209 (2%)
Frame = +1
Query: 325 APXSPLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGT 504
AP + S +F L L +LK + GF P+ IQ + +++G+
Sbjct: 93 APQTGKKSSGSFAGLGLSQLVLKNIARKGFKQPTPIQRKTIPLVLEG--KDVVGMARTGS 150
Query: 505 GKTAAFVLAXLS--RVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG 678
GKTAAFVL L +V S K + + LSP+ ELA+QT +V K +++L V G
Sbjct: 151 GKTAAFVLPMLEKLKVHSAKVGARAVILSPSRELALQTLKV-VKDFSAGTDLRLAMLVGG 209
Query: 679 EELPRGSKI---TDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQC 849
+ L K+ I+I TPG+ V+ + + ++ DEAD + G Q
Sbjct: 210 DSLEEQFKMMMSNPDIIIATPGRFLHLKVEMEL-SLASVEYICFDEADRLF-ELGFGEQM 267
Query: 850 IRIHKCLXSTCQMMFFSATYGTAVMQLLR 936
+ L S Q + FSAT +++ +
Sbjct: 268 NELLASLPSNRQTLLFSATLPKTLVEFAK 296
>UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG5800-PA - Tribolium castaneum
Length = 770
Score = 66.5 bits (155), Expect = 1e-09
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 6/203 (2%)
Frame = +1
Query: 346 SVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFV 525
++ +F L L P LKG+ G+ P+ IQ + +Q+G+GKT AF+
Sbjct: 49 TINSFDDLPLSPKTLKGLKECGYTKPTDIQRETIKLGLTG--KDILGAAQTGSGKTLAFL 106
Query: 526 LAXLSRVDSNKXYPQ----VLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPR 693
+ L R+ + L ++PT ELA Q E ++ + E + G++L
Sbjct: 107 IPILERLYCKQWTRLDGLGALVITPTRELAYQIFEELRRVGEH-HEFSAGLIIGGKDLKF 165
Query: 694 GSKITD--HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKC 867
D +I+IGTPG++ + +FD +++ VLDEAD ++ G + I
Sbjct: 166 ERNRMDQCNIVIGTPGRILQHMDENPLFDCVNMEILVLDEADRCLD-MGFEQTMNAIVAN 224
Query: 868 LXSTCQMMFFSATYGTAVMQLLR 936
L + Q + FSAT +V L R
Sbjct: 225 LPAKRQTLLFSATQTKSVRDLAR 247
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 66.5 bits (155), Expect = 1e-09
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 8/204 (3%)
Frame = +1
Query: 346 SVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFV 525
S + F L L P LL+ + G+ P+ IQ AQ+ GTGKTA+F
Sbjct: 5 SAQAFADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQT--GTGKTASFA 62
Query: 526 LAXLSRVDSN-----KXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP 690
L L R+ + K +VL L+PT EL Q + ++ P +++ G
Sbjct: 63 LPLLHRLAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRHQP-VRVTTIFGGVSQV 121
Query: 691 RGSKITDH---ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIH 861
K + I++ PG++ D ++ G+ D+ +++ VLDEAD M++ G RI
Sbjct: 122 HQVKALEEGVDIIVAAPGRLLDL-IEQGLCDLSQLETLVLDEADQMLD-MGFAKPIERIV 179
Query: 862 KCLXSTCQMMFFSATYGTAVMQLL 933
L + FSAT ++ L+
Sbjct: 180 ATLPEDRHTVLFSATMPKSIAALV 203
>UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5;
Eukaryota|Rep: ATP-dependent RNA helicase vasa -
Drosophila melanogaster (Fruit fly)
Length = 661
Score = 66.5 bits (155), Expect = 1e-09
Identities = 59/203 (29%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Frame = +1
Query: 349 VKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVL 528
++ F + L ++ V G+ P+ IQ + A +Q+G+GKTAAF+L
Sbjct: 244 IQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSG--RDLMACAQTGSGKTAAFLL 301
Query: 529 AXLSRV-----DSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPR 693
LS++ + PQV+ +SPT ELAIQ A K A F +K+ G
Sbjct: 302 PILSKLLEDPHELELGRPQVVIVSPTRELAIQIFNEARKFA-FESYLKIGIVYGGTSFRH 360
Query: 694 GSK-ITD--HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQ-GHQXQCIRIH 861
++ IT H++I TPG++ D+ V + VLDEAD M++ + I H
Sbjct: 361 QNECITRGCHVVIATPGRLLDF-VDRTFITFEDTRFVVLDEADRMLDMGFSEDMRRIMTH 419
Query: 862 KCLXSTCQMMFFSATYGTAVMQL 930
+ Q + FSAT+ + ++
Sbjct: 420 VTMRPEHQTLMFSATFPEEIQRM 442
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 66.5 bits (155), Expect = 1e-09
Identities = 51/198 (25%), Positives = 96/198 (48%), Gaps = 5/198 (2%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F +L+L PN+ + G+ P+ IQ A +++G+GKTAAF++ L
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVD--VVAMARTGSGKTAAFLIPML 87
Query: 538 SRVDSN--KXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL-PRGSKIT 708
++ + + + L LSPT +LA QT + ++ KF ++++ V G+ + + ++T
Sbjct: 88 EKLKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKF-TDLRVSLLVGGDSMEDQFEELT 146
Query: 709 --DHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTC 882
++I TPG++ + + ++ V DEAD + G Q +I L
Sbjct: 147 KGPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFG-MGFAEQLHQILTQLSENR 205
Query: 883 QMMFFSATYGTAVMQLLR 936
Q + FSAT +A+ + +
Sbjct: 206 QTLLFSATLPSALAEFAK 223
>UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 26 - Arabidopsis thaliana (Mouse-ear cress)
Length = 850
Score = 66.5 bits (155), Expect = 1e-09
Identities = 66/215 (30%), Positives = 95/215 (44%), Gaps = 16/215 (7%)
Frame = +1
Query: 334 SPLYSVKT-FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGK 510
S Y KT F L P LK + GF + +Q + A++++GTGK
Sbjct: 375 SDSYLSKTRFDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQG--KDVLAKAKTGTGK 432
Query: 511 TAAFVLAXLSRV--------DSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKY 666
T AF+L + V DS + VL + PT ELA Q A + K+ P I ++
Sbjct: 433 TVAFLLPAIEAVIKSPPASRDSRQPPIIVLVVCPTRELASQAAAEANTLLKYHPSIGVQV 492
Query: 667 AVRGEELPRGSKITD----HILIGTPGKMFDWGVKFGMFD---MGKIKVFVLDEADVMIN 825
+ G +LP + IL+ TPG++ D F MG +KV VLDEAD +++
Sbjct: 493 VIGGTKLPTEQRRMQTNPCQILVATPGRLKDHIENTSGFATRLMG-VKVLVLDEADHLLD 551
Query: 826 RQGHQXQCIRIHKCLXSTCQMMFFSATYGTAVMQL 930
G + RI + Q FSAT V Q+
Sbjct: 552 -MGFRRDIERIIAAVPKQRQTFLFSATVPEEVRQI 585
>UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 432
Score = 66.1 bits (154), Expect = 2e-09
Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 9/204 (4%)
Frame = +1
Query: 352 KTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLA 531
KTF L L P +LK V G+ P++IQ AQ+ G+GKTA+F+L
Sbjct: 9 KTFKDLGLIPEVLKVVEYLGYKKPTRIQENSIPVALQKKDIIGIAQT--GSGKTASFLLP 66
Query: 532 XLSRV----DSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGS 699
+ + + N+ + ++ + PT ELA Q EV +M K P + V G ++ + S
Sbjct: 67 MVQHLLNVKEKNRGFYCII-IEPTRELAAQVVEVIDEMGKALPGLTSCLLVGGMDVMKQS 125
Query: 700 ---KITDHILIGTPGKMFDW--GVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHK 864
+++GTPG++ K + K+K V+DEAD ++ I K
Sbjct: 126 VQLAKRPQVIVGTPGRIVYHIKNTKGVEESIEKVKFLVIDEADKLLEMDFANEIDYLIEK 185
Query: 865 CLXSTCQMMFFSATYGTAVMQLLR 936
L M FSAT T V +L R
Sbjct: 186 -LPKQRTTMLFSATMSTKVEKLQR 208
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 66.1 bits (154), Expect = 2e-09
Identities = 57/197 (28%), Positives = 87/197 (44%), Gaps = 5/197 (2%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF AL L P +L+ + G +P+ IQ AQ+ GTGKT F+L
Sbjct: 2 TFEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQT--GTGKTGGFLLPV 59
Query: 535 LSRVDSNKXY---PQVLCLSPTYELAIQTGEVAAKMAKF--CPEIKLKYAVRGEELPRGS 699
L ++ + + + L LSPT ELA Q + A AK+ + L V R
Sbjct: 60 LHKIAEGRRHGIRNRALVLSPTRELATQIHQAAKDYAKYLHTNAVLLVGGVDFIRQERNL 119
Query: 700 KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXST 879
K I++ TPG++ D V+ + + ++DEAD M++ G I + L
Sbjct: 120 KRNWDIVVATPGRLLD-HVRRNNLTLANTSLVIIDEADRMLD-MGFLPDINTIVRQLPKG 177
Query: 880 CQMMFFSATYGTAVMQL 930
Q + FSAT + +L
Sbjct: 178 RQSLLFSATCPPRIQEL 194
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 66.1 bits (154), Expect = 2e-09
Identities = 47/142 (33%), Positives = 68/142 (47%), Gaps = 3/142 (2%)
Frame = +1
Query: 490 SQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYA 669
+Q+GTGKTAAF L L+ +D PQ L L PT ELA Q E + +++
Sbjct: 53 AQTGTGKTAAFALPILANIDVKVRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSI 112
Query: 670 VRGEELPRGSKIT---DHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQ 840
G ++ + K HI++ TPG++ D ++ D+ I VLDEAD M+ R G
Sbjct: 113 FGGADMRQQLKSLREGTHIVVATPGRLLD-HIERRSIDLTGINAVVLDEADEML-RMGFI 170
Query: 841 XQCIRIHKCLXSTCQMMFFSAT 906
I ++ FSAT
Sbjct: 171 DDVDTILAKTPKERKVALFSAT 192
>UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 402
Score = 66.1 bits (154), Expect = 2e-09
Identities = 55/187 (29%), Positives = 91/187 (48%), Gaps = 4/187 (2%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F AL + P+++ V + G+ P+ IQ + +++G+GKT AF++ L
Sbjct: 3 FQALGVHPDIIAAVESMGWSKPTPIQEKTIKQAIAG--EDVSGAAETGSGKTGAFLIPLL 60
Query: 538 SRV-DSNKXYPQVLCLSPTYELAIQTGEVAAKM-AKFCPEIKLKYAVRG--EELPRGSKI 705
++ + ++ + L+PT EL IQ EVA M AK I Y E++ + +K
Sbjct: 61 HQLLEKDRPEKYGIILAPTRELVIQIAEVAQLMSAKLNITIVPIYGGVDDVEQMAQLAK- 119
Query: 706 TDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQ 885
HI++ TPG++ FD+ ++V V+DEAD M + + C T Q
Sbjct: 120 RPHIIVATPGRLAQLIRDAKGFDLKPVRVIVIDEADKMAAVEFFDDISVITSNC-AKTHQ 178
Query: 886 MMFFSAT 906
+M FSAT
Sbjct: 179 IMLFSAT 185
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 65.7 bits (153), Expect = 2e-09
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF L L +L V G+ P+ IQ + A +Q+GTGKTA F L
Sbjct: 6 TFAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAG--KDVMASAQTGTGKTAGFTLPL 63
Query: 535 LSRVD-------SNKXYP-QVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL- 687
L R+ S +P + L ++PT ELA+Q E K K+ ++ G +
Sbjct: 64 LYRLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYL-ALRTAVVFGGINIE 122
Query: 688 PRGSKITD--HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIH 861
P+ + + IL+ TPG++ D V+ + K ++ VLDEAD M++ G R+
Sbjct: 123 PQIAALQAGVEILVATPGRLLDL-VEQKAVNFSKTEILVLDEADRMLD-MGFLPDIKRVM 180
Query: 862 KCLXSTCQMMFFSATYGTAVMQL 930
L Q + FSAT+ + +L
Sbjct: 181 ALLSPQRQSLMFSATFSGEIRKL 203
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 65.7 bits (153), Expect = 2e-09
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 8/199 (4%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L L +++ + G+ P+ IQ AQ+ GTGKTA+F L L
Sbjct: 293 FADLGLSEPIMRAIEELGYEHPTPIQAQAIPEVLKGHDVLGVAQT--GTGKTASFTLPML 350
Query: 538 SRVDSNK---XYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYA--VRGEELPRGSK 702
++ ++ P+ L L PT ELA+Q E K+ ++L +A + GE +
Sbjct: 351 QKLAGSRARARMPRSLILEPTRELALQVAENFKLYGKY---LRLTHALLIGGESMAEQRD 407
Query: 703 ITDH---ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLX 873
+ + +LI TPG++ D + G+ + + V+DEAD M++ G +I L
Sbjct: 408 VLNRGVDVLIATPGRLLDLFGRGGLL-LTQTSTLVIDEADRMLD-MGFIPDIEKIVALLP 465
Query: 874 STCQMMFFSATYGTAVMQL 930
+ Q +FFSAT + +L
Sbjct: 466 AHRQTLFFSATMAPEIRRL 484
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 65.7 bits (153), Expect = 2e-09
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 11/202 (5%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F + P +L+ + G+ + +Q + A +Q+GTGKTAAF L L
Sbjct: 3 FESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRG--EDVLASAQTGTGKTAAFALPIL 60
Query: 538 SRVDSNKXYPQ-----VLCLSPTYELAIQTGEVAAKMAKFCPEIKL------KYAVRGEE 684
++ Q L L+PT ELA Q + + +K L K A + ++
Sbjct: 61 QKMHERPMTVQHSNARALILTPTRELAAQVADNISAYSKHMNISVLTIYGGMKMATQAQK 120
Query: 685 LPRGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHK 864
L +G+ I++ TPG++ + V + + ++ VLDEAD M++ G +I +
Sbjct: 121 LKQGA----DIIVATPGRLLEHIVACNL-SLSNVEFLVLDEADRMLD-MGFSTDIQKILQ 174
Query: 865 CLXSTCQMMFFSATYGTAVMQL 930
+ Q + FSAT+ TAV +L
Sbjct: 175 AVNKKRQNLLFSATFSTAVKKL 196
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 65.7 bits (153), Expect = 2e-09
Identities = 58/199 (29%), Positives = 90/199 (45%), Gaps = 8/199 (4%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L L + + + G+ P+ IQ AQ+ GTGKTA+F L +
Sbjct: 225 FADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQT--GTGKTASFTLPMM 282
Query: 538 SRVDSNKX---YPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYA--VRGEELPRGSK 702
+ + P+ L L PT ELA+Q VA K+ +KL +A + GE +
Sbjct: 283 DILSDRRARARMPRSLILEPTRELALQ---VAENFVKYGQYLKLNHALLIGGESMNDQRD 339
Query: 703 ITD---HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLX 873
+ +LI TPG++ D + G+ + ++ V+DEAD M++ G RI L
Sbjct: 340 VLSKGVDVLIATPGRLIDLFDRGGLL-LTDTRILVIDEADRMLD-MGFIPDVERIVSLLP 397
Query: 874 STCQMMFFSATYGTAVMQL 930
Q +FFSAT + +L
Sbjct: 398 HNRQTLFFSATMAPEIRRL 416
>UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Desulfuromonadales|Rep: DEAD/DEAH box helicase
domain protein - Geobacter bemidjiensis Bem
Length = 482
Score = 65.7 bits (153), Expect = 2e-09
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 9/200 (4%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F L + + KG+ GF + IQ + Q+Q+GTGKTA F+++
Sbjct: 3 FTELQIPAEVQKGIDETGFTQCTPIQEKALPLALTG--KDVAGQAQTGTGKTATFLISIF 60
Query: 538 SRVDS-----NKXYPQVLCLSPTYELAIQTGEVAAKMAKFCP-EIKLKYAVRGEELPRGS 699
+++ S + +P+ L L+PT EL +Q + A + K+ I+ Y R +
Sbjct: 61 TKLLSQAKTGGEHHPRALILAPTRELVVQIEKDAQALGKYTGFNIQAIYGGVDYMKQRDA 120
Query: 700 -KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCL-- 870
K I+IGTPG++ D+ +K ++ + ++ V+DEAD M + G I + L
Sbjct: 121 LKAGADIVIGTPGRLIDY-LKQKVYSVKDVEALVIDEADRMFD-MGFIADLRFILRRLPP 178
Query: 871 XSTCQMMFFSATYGTAVMQL 930
Q + FSAT T VM+L
Sbjct: 179 YDKRQNLLFSATLNTRVMEL 198
>UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=2;
Polaribacter|Rep: Putative ATP-dependent RNA helicase -
Polaribacter dokdonensis MED152
Length = 411
Score = 65.7 bits (153), Expect = 2e-09
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 9/200 (4%)
Frame = +1
Query: 358 FXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXL 537
F + L ++ K + F P+ +Q + +Q+GTGKTAAF L +
Sbjct: 3 FSDIPLNKSIQKAIAEARFHKPTLVQEKTIPLVLDK--KNVIVAAQTGTGKTAAFALPII 60
Query: 538 S----RVDSNKXYPQV--LCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGS 699
+ + D+ K ++ L ++PT ELAIQ E +K+ ++ G L
Sbjct: 61 NLLFDKQDAEKGEKKIKALVITPTRELAIQILENFKSYSKYS-NLRSTAVFGGVSLEPQK 119
Query: 700 KITDH---ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCL 870
+I IL+ TPG++ D ++ G D+ ++++FVLDEAD+M++ G +I K
Sbjct: 120 EILAKGVDILVATPGRLIDLQMQ-GNIDLSQLEIFVLDEADLMLD-MGFINDIKKIEKLC 177
Query: 871 XSTCQMMFFSATYGTAVMQL 930
Q + FSAT + +L
Sbjct: 178 PRKKQTLLFSATIPEKIDEL 197
>UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 643
Score = 65.7 bits (153), Expect = 2e-09
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 7/201 (3%)
Frame = +1
Query: 352 KTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLA 531
KT+ L L LLK V + P+ IQ + A S +G+GKTAAF++
Sbjct: 190 KTWQDLGLIKPLLKAVEEMQYEFPTNIQSLAIPAALQG--KDLLASSLTGSGKTAAFLIP 247
Query: 532 XLSRVDSNKX--YPQVLCLSPTYELAIQTGEVAAKMAKF-----CPEIKLKYAVRGEELP 690
L + + Y + L ++PT ELA Q EV K+ K+ C I + E
Sbjct: 248 ILQKFYRSPFTNYSKALIVTPTRELAFQIYEVFTKLNKYTKLRACLVIGQSAMQKQEAEL 307
Query: 691 RGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCL 870
RG+ ++I TPG++ D D+ ++V + DEAD +++ G + I +
Sbjct: 308 RGNP---EVIIATPGRLIDHLQNSRSIDLDNLEVLIFDEADKLLD-LGFEAAAQNIVENC 363
Query: 871 XSTCQMMFFSATYGTAVMQLL 933
Q + FSAT + V +L+
Sbjct: 364 NRERQTLLFSATLTSEVNKLI 384
>UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP9 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 597
Score = 65.7 bits (153), Expect = 2e-09
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 4/206 (1%)
Frame = +1
Query: 325 APXSPLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGT 504
AP V +F L L P LL+G+ + +P+ +Q + A+S +GT
Sbjct: 38 APTPAKEVVASFAELQLEPRLLRGIRDQKWGSPTAVQSKAIPLALQG--RDILARSGTGT 95
Query: 505 GKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPE-IKLK-YAVRG 678
GKT A++L L K ++ L PT ELA+Q +VA ++ C + ++++ A +
Sbjct: 96 GKTGAYLLPILHNTLLRKGKTSLI-LVPTKELALQITKVAKALSAHCGQAVRIQNIAGKE 154
Query: 679 EELPRGSKITDH--ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCI 852
E+ +K+ D+ I+I TP + + G + ++ V+DE D+++ G +
Sbjct: 155 SEVVTKAKLADNPDIVIATPARA-SANINTGALAVTELAHLVVDEGDLVMG-YGFKEDLD 212
Query: 853 RIHKCLXSTCQMMFFSATYGTAVMQL 930
+I + + QM SAT T V L
Sbjct: 213 QIAQNIPKGVQMFLMSATLNTEVESL 238
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 65.3 bits (152), Expect = 3e-09
Identities = 64/204 (31%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAF---- 522
TF L L +L + GF P+ IQ + A +Q+GTGKTAA+
Sbjct: 4 TFIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQG--RDVLAAAQTGTGKTAAYGLPL 61
Query: 523 --VLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCP-EIKLKYA-----VRG 678
+L+ SR ++ +P+ L L+PT ELA Q + + A+ I Y V+
Sbjct: 62 IQMLSRQSREETAPKHPRALILAPTRELAQQVFDNLKQYAQHTELAIVTVYGGTSIRVQQ 121
Query: 679 EELPRGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRI 858
E+L +G ILI TPG++ D + + ++++ VLDEAD M++ G RI
Sbjct: 122 EQLAKGV----DILIATPGRLLD-HLFTKKTSLNQLQMLVLDEADRMLD-MGFLPDIQRI 175
Query: 859 HKCLXSTCQMMFFSATYGTAVMQL 930
K + Q + FSAT+ T V L
Sbjct: 176 MKRMPEERQTLLFSATFETRVKAL 199
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 788,048,368
Number of Sequences: 1657284
Number of extensions: 12687597
Number of successful extensions: 26602
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 25129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25752
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 123197995029
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -