Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_I16
         (1219 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    55   5e-09

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 54.8 bits (126), Expect = 5e-09
 Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 16/220 (7%)
 Frame = +1

Query: 319 RXAPXSPLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQS 498
           R +  +P   V++F    L   ++  V    +  P+ IQ            +   A +Q+
Sbjct: 163 RVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNG--RDLMACAQT 220

Query: 499 GTGKTAAFVLA----XLSRVDS---NKXYPQVLCLSPTYELAIQTGEVAAKMA-----KF 642
           G+GKTAAF+L      L + DS       P ++ ++PT ELAIQ  +   K A     K 
Sbjct: 221 GSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKLKV 280

Query: 643 CPEIKLKYAVRGEELPRGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMI 822
           C            +L RG     H+L+ TPG++ D+ +  G      +   VLDEAD M+
Sbjct: 281 CVSYGGTAVQHQLQLMRGG---CHVLVATPGRLLDF-IDRGYVTFENVNFVVLDEADRML 336

Query: 823 NRQGHQXQCIRI--HKCL--XSTCQMMFFSATYGTAVMQL 930
           +  G      ++  H  +      Q + FSAT+   + +L
Sbjct: 337 D-MGFLPSIEKVMGHATMPEKQQRQTLMFSATFPAEIQEL 375


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 857,728
Number of Sequences: 2352
Number of extensions: 14754
Number of successful extensions: 39
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 138565233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)