Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_I16
(1219 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 166 2e-41
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 166 2e-41
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 166 2e-41
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 100 2e-21
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 100 2e-21
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 99 3e-21
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 99 3e-21
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 85 7e-17
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 85 7e-17
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 79 8e-15
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 78 1e-14
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 69 7e-12
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 68 2e-11
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 68 2e-11
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 64 2e-10
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 64 2e-10
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 60 3e-09
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 60 3e-09
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 60 3e-09
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 59 5e-09
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 58 1e-08
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 57 2e-08
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 57 2e-08
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 57 2e-08
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 56 4e-08
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 56 4e-08
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 56 4e-08
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 56 7e-08
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 55 1e-07
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 54 2e-07
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 54 2e-07
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 54 2e-07
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 54 2e-07
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 54 3e-07
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 52 6e-07
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 51 1e-06
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 49 8e-06
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 44 2e-04
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 42 7e-04
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 42 7e-04
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 42 0.001
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 39 0.006
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 38 0.014
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 34 0.23
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 166 bits (404), Expect = 2e-41
Identities = 92/209 (44%), Positives = 118/209 (56%), Gaps = 5/209 (2%)
Frame = +1
Query: 313 IQRXAPXSPLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQS 492
+QR P SPLYS+ +F L L P +LK + F P++IQ AQ+
Sbjct: 196 VQRQDPKSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQA 255
Query: 493 QSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAV 672
QSGTGKTAAFVL L R+D N PQ +CL+PT ELA Q GEV KM KF +K+ YA+
Sbjct: 256 QSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAI 315
Query: 673 RGEELP--RGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQ 846
+G + RG K+T+ I+IGTPG D+ K+ D KI+ VLDEADVMI QG
Sbjct: 316 KGGNMAAMRGRKLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDI 375
Query: 847 CIRIHKCL---XSTCQMMFFSATYGTAVM 924
I+ + + Q M FSATY V+
Sbjct: 376 STTIYNMVEDASDSVQSMLFSATYDEPVI 404
Score = 44.0 bits (99), Expect = 2e-04
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +3
Query: 939 MVSNPIIIRLLREEESLDNIKQYYVSAKCR-XKYXAXVXLW 1058
++ N I++ L REE++L NIKQ+YV CR KY A V L+
Sbjct: 410 IIKNAIVVMLKREEQALPNIKQFYVQCACRDSKYAAIVNLY 450
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 166 bits (404), Expect = 2e-41
Identities = 92/209 (44%), Positives = 118/209 (56%), Gaps = 5/209 (2%)
Frame = +1
Query: 313 IQRXAPXSPLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQS 492
+QR P SPLYS+ +F L L P +LK + F P++IQ AQ+
Sbjct: 221 VQRQDPKSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQA 280
Query: 493 QSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAV 672
QSGTGKTAAFVL L R+D N PQ +CL+PT ELA Q GEV KM KF +K+ YA+
Sbjct: 281 QSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAI 340
Query: 673 RGEELP--RGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQ 846
+G + RG K+T+ I+IGTPG D+ K+ D KI+ VLDEADVMI QG
Sbjct: 341 KGGNMAAMRGRKLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDI 400
Query: 847 CIRIHKCL---XSTCQMMFFSATYGTAVM 924
I+ + + Q M FSATY V+
Sbjct: 401 STTIYNMVEDASDSVQSMLFSATYDEPVI 429
Score = 44.0 bits (99), Expect = 2e-04
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +3
Query: 939 MVSNPIIIRLLREEESLDNIKQYYVSAKCR-XKYXAXVXLW 1058
++ N I++ L REE++L NIKQ+YV CR KY A V L+
Sbjct: 435 IIKNAIVVMLKREEQALPNIKQFYVQCACRDSKYAAIVNLY 475
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 166 bits (404), Expect = 2e-41
Identities = 92/209 (44%), Positives = 118/209 (56%), Gaps = 5/209 (2%)
Frame = +1
Query: 313 IQRXAPXSPLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQS 492
+QR P SPLYS+ +F L L P +LK + F P++IQ AQ+
Sbjct: 605 VQRQDPKSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQA 664
Query: 493 QSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAV 672
QSGTGKTAAFVL L R+D N PQ +CL+PT ELA Q GEV KM KF +K+ YA+
Sbjct: 665 QSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAI 724
Query: 673 RGEELP--RGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQ 846
+G + RG K+T+ I+IGTPG D+ K+ D KI+ VLDEADVMI QG
Sbjct: 725 KGGNMAAMRGRKLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDI 784
Query: 847 CIRIHKCL---XSTCQMMFFSATYGTAVM 924
I+ + + Q M FSATY V+
Sbjct: 785 STTIYNMVEDASDSVQSMLFSATYDEPVI 813
Score = 44.0 bits (99), Expect = 2e-04
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +3
Query: 939 MVSNPIIIRLLREEESLDNIKQYYVSAKCR-XKYXAXVXLW 1058
++ N I++ L REE++L NIKQ+YV CR KY A V L+
Sbjct: 819 IIKNAIVVMLKREEQALPNIKQFYVQCACRDSKYAAIVNLY 859
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 100 bits (240), Expect = 2e-21
Identities = 62/197 (31%), Positives = 104/197 (52%), Gaps = 3/197 (1%)
Frame = +1
Query: 349 VKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVL 528
V++F + L LL+G+ GF PS IQ + AQ+QSGTGKTA F +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTG--KDVIAQAQSGTGKTATFSV 85
Query: 529 AXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL---PRGS 699
+ L R+D + Q L ++PT ELA Q +V + + ++ + + + G + R
Sbjct: 86 SILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYL-NVNILPCIGGTSVRDDQRKL 144
Query: 700 KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXST 879
+ H+++GTPG++ D + D +IK+FVLDEAD M++R G + Q + + +
Sbjct: 145 EAGIHVVVGTPGRVGDM-INRNALDTSRIKMFVLDEADEMLSR-GFKDQIYEVFRSMPQD 202
Query: 880 CQMMFFSATYGTAVMQL 930
Q++ SAT + V+ +
Sbjct: 203 VQVVLLSATMPSEVLDV 219
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 100 bits (240), Expect = 2e-21
Identities = 62/197 (31%), Positives = 104/197 (52%), Gaps = 3/197 (1%)
Frame = +1
Query: 349 VKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVL 528
V++F + L LL+G+ GF PS IQ + AQ+QSGTGKTA F +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTG--KDVIAQAQSGTGKTATFSV 85
Query: 529 AXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL---PRGS 699
+ L R+D + Q L ++PT ELA Q +V + + ++ + + + G + R
Sbjct: 86 SILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYL-NVNILPCIGGTSVRDDQRKL 144
Query: 700 KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXST 879
+ H+++GTPG++ D + D +IK+FVLDEAD M++R G + Q + + +
Sbjct: 145 EAGIHVVVGTPGRVGDM-INRNALDTSRIKMFVLDEADEMLSR-GFKDQIYEVFRSMPQD 202
Query: 880 CQMMFFSATYGTAVMQL 930
Q++ SAT + V+ +
Sbjct: 203 VQVVLLSATMPSEVLDV 219
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 99 bits (238), Expect = 3e-21
Identities = 65/197 (32%), Positives = 102/197 (51%), Gaps = 3/197 (1%)
Frame = +1
Query: 349 VKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVL 528
+ TF + L +LL+G+ A GF PS IQ + AQ+QSGTGKTA F +
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKA--RDVIAQAQSGTGKTATFSI 82
Query: 529 AXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKIT 708
+ L +D+ Q L LSPT ELA+Q +V + + ++ + G L +
Sbjct: 83 SVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYM-NVQCHACIGGTNLGEDIRKL 141
Query: 709 D---HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXST 879
D H++ GTPG++FD ++ IK+ VLDEAD M+N+ G + Q I++ L
Sbjct: 142 DYGQHVVSGTPGRVFDM-IRRRNLRTRAIKLLVLDEADEMLNK-GFKEQLYDIYRYLPPG 199
Query: 880 CQMMFFSATYGTAVMQL 930
Q++ SAT ++++
Sbjct: 200 AQVVLLSATLPHEILEM 216
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 99 bits (238), Expect = 3e-21
Identities = 65/197 (32%), Positives = 102/197 (51%), Gaps = 3/197 (1%)
Frame = +1
Query: 349 VKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVL 528
+ TF + L +LL+G+ A GF PS IQ + AQ+QSGTGKTA F +
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKA--RDVIAQAQSGTGKTATFSI 82
Query: 529 AXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKIT 708
+ L +D+ Q L LSPT ELA+Q +V + + ++ + G L +
Sbjct: 83 SVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYM-NVQCHACIGGTNLGEDIRKL 141
Query: 709 D---HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXST 879
D H++ GTPG++FD ++ IK+ VLDEAD M+N+ G + Q I++ L
Sbjct: 142 DYGQHVVSGTPGRVFDM-IRRRNLRTRAIKLLVLDEADEMLNK-GFKEQLYDIYRYLPPG 199
Query: 880 CQMMFFSATYGTAVMQL 930
Q++ SAT ++++
Sbjct: 200 AQVVLLSATLPHEILEM 216
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 85.4 bits (202), Expect = 7e-17
Identities = 56/182 (30%), Positives = 86/182 (47%), Gaps = 4/182 (2%)
Frame = +1
Query: 373 LXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXLSRVDS 552
L P +L+ + GF PS++Q Q++SG GKTA FV+ L +++
Sbjct: 48 LKPEILRAIGDCGFEHPSEVQHECIPQAILG--MDVVCQAKSGMGKTAVFVITTLQQLEP 105
Query: 553 NKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG----EELPRGSKITDHIL 720
V+C+ T ELA Q + + +K+ P +K+ G ++ R + HI+
Sbjct: 106 VDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIV 165
Query: 721 IGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQMMFFS 900
+GTPG+M + G + K+K FVLDE D MI + I K Q+M FS
Sbjct: 166 VGTPGRMLAL-ARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFS 224
Query: 901 AT 906
AT
Sbjct: 225 AT 226
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 85.4 bits (202), Expect = 7e-17
Identities = 56/182 (30%), Positives = 86/182 (47%), Gaps = 4/182 (2%)
Frame = +1
Query: 373 LXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXLSRVDS 552
L P +L+ + GF PS++Q Q++SG GKTA FV+ L +++
Sbjct: 48 LKPEILRAIGDCGFEHPSEVQHECIPQAILG--MDVVCQAKSGMGKTAVFVITTLQQLEP 105
Query: 553 NKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG----EELPRGSKITDHIL 720
V+C+ T ELA Q + + +K+ P +K+ G ++ R + HI+
Sbjct: 106 VDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIV 165
Query: 721 IGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQMMFFS 900
+GTPG+M + G + K+K FVLDE D MI + I K Q+M FS
Sbjct: 166 VGTPGRMLAL-ARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFS 224
Query: 901 AT 906
AT
Sbjct: 225 AT 226
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 78.6 bits (185), Expect = 8e-15
Identities = 56/191 (29%), Positives = 94/191 (49%), Gaps = 3/191 (1%)
Frame = +1
Query: 373 LXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXLSRVDS 552
L +LL G+ G+ PS IQ Q A++++GTGKT A+ + + ++
Sbjct: 50 LGRDLLMGIFEKGWEKPSPIQEASIGVALTG--QDILARAKNGTGKTGAYCIPVIEKIQP 107
Query: 553 NKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP---RGSKITDHILI 723
Q + + PT ELA+QT ++ +++K ++K+ G +L T H++I
Sbjct: 108 ALKAIQAMVIVPTRELALQTSQICVELSKHI-QLKVMVTTGGTDLRDDIMRLNGTVHLVI 166
Query: 724 GTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQMMFFSA 903
TPG++ D K G+ M K VLDEAD +++ Q Q R+ L Q+M +SA
Sbjct: 167 ATPGRILDLMEK-GVAKMEHCKTLVLDEADKLLS-QDFQGILDRLINFLPKERQVMLYSA 224
Query: 904 TYGTAVMQLLR 936
T+ V ++
Sbjct: 225 TFPNTVTSFMQ 235
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 77.8 bits (183), Expect = 1e-14
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
Frame = +1
Query: 373 LXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXLSRVDS 552
L P +L+ + GF PS++Q Q++SG GKTA FV+ L +++
Sbjct: 47 LKPEILRAIGDCGFEHPSEVQHECIPQAILG--MDVVCQAKSGMGKTAVFVITTLQQLEP 104
Query: 553 NKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRG----EELPRGSKITDHIL 720
V+C+ T ELA Q + + +K+ P +K+ G ++ R + HI+
Sbjct: 105 VDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIV 164
Query: 721 IGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMI 822
+GTPG+M + G + K+K FVLDE D MI
Sbjct: 165 VGTPGRMLAL-ARSGKLKLDKVKYFVLDECDKMI 197
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 68.9 bits (161), Expect = 7e-12
Identities = 51/188 (27%), Positives = 88/188 (46%)
Frame = +1
Query: 367 LHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXLSRV 546
+ L LL+G+ GF PS IQ + QSQ+G+GKT ++ L +
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTG--KDVTIQSQAGSGKTVISLIDILQGI 58
Query: 547 DSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITDHILIG 726
D + QV+ L+P +A + E + + + + G + + H+L+G
Sbjct: 59 DCEDAHLQVILLAPQRGMAQRAHEQLKSLGR---NLNVNATCLGFDTTAENDKISHVLMG 115
Query: 727 TPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQMMFFSAT 906
TP K F + D +IK+FVLDEAD M+++ G + Q + + + Q++ SAT
Sbjct: 116 TP-KDFLSNIP---SDTSRIKMFVLDEADEMLSK-GFKDQIYEVFRSMPQDVQVVLLSAT 170
Query: 907 YGTAVMQL 930
+ V+ +
Sbjct: 171 MPSEVLDV 178
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 67.7 bits (158), Expect = 2e-11
Identities = 55/195 (28%), Positives = 88/195 (45%), Gaps = 2/195 (1%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF +L + L+ + F PS +Q + Q++SGTGKT F +
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLG--RDMLVQAKSGTGKTLVFSVLA 80
Query: 535 LSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP--RGSKIT 708
+ +DS + Q + ++PT E+++Q E K+A + +L +
Sbjct: 81 VENLDSRSSHIQKVIVTPTREISVQIKETVRKVAPTGARTSVYVGGSAHKLNLIDLKQTR 140
Query: 709 DHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQM 888
I+IGTPG++ VK G +M + FVLDEAD +++ I I+ L Q+
Sbjct: 141 PQIVIGTPGRIAQL-VKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINS-LPQIRQV 198
Query: 889 MFFSATYGTAVMQLL 933
FSATY + LL
Sbjct: 199 AVFSATYPRNLDNLL 213
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 67.7 bits (158), Expect = 2e-11
Identities = 55/195 (28%), Positives = 88/195 (45%), Gaps = 2/195 (1%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
TF +L + L+ + F PS +Q + Q++SGTGKT F +
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLG--RDMLVQAKSGTGKTLVFSVLA 80
Query: 535 LSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELP--RGSKIT 708
+ +DS + Q + ++PT E+++Q E K+A + +L +
Sbjct: 81 VENLDSRSSHIQKVIVTPTREISVQIKETVRKVAPTGARTSVYVGGSAHKLNLIDLKQTR 140
Query: 709 DHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQM 888
I+IGTPG++ VK G +M + FVLDEAD +++ I I+ L Q+
Sbjct: 141 PQIVIGTPGRIAQL-VKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINS-LPQIRQV 198
Query: 889 MFFSATYGTAVMQLL 933
FSATY + LL
Sbjct: 199 AVFSATYPRNLDNLL 213
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 64.1 bits (149), Expect = 2e-10
Identities = 53/182 (29%), Positives = 91/182 (50%), Gaps = 4/182 (2%)
Frame = +1
Query: 373 LXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXLSRVDS 552
L ++ K + GF P+ IQ + A S++G+GKTAAFV+ L ++
Sbjct: 31 LDHSVYKAIEKKGFNQPTPIQRKTIPCIMDG--KDVVAMSRTGSGKTAAFVIPMLQKLKR 88
Query: 553 NKXYP-QVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL-PRGSKITDH--IL 720
+ L +SPT ELA+QT +V ++ +F ++ V G+++ + S I ++ IL
Sbjct: 89 RDTTGIRALMVSPTRELALQTFKVVKELGRF-TGLRCACLVGGDQIEEQFSTIHENPDIL 147
Query: 721 IGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQMMFFS 900
+ TPG++ V+ + + ++ V DEAD + G Q Q K + + Q + FS
Sbjct: 148 LATPGRLLHVIVEMDL-RLSYVQYVVFDEADRLF-EMGFQDQLTETLKRIPESRQTLLFS 205
Query: 901 AT 906
AT
Sbjct: 206 AT 207
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 64.1 bits (149), Expect = 2e-10
Identities = 53/182 (29%), Positives = 91/182 (50%), Gaps = 4/182 (2%)
Frame = +1
Query: 373 LXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXLSRVDS 552
L ++ K + GF P+ IQ + A S++G+GKTAAFV+ L ++
Sbjct: 31 LDHSVYKAIEKKGFNQPTPIQRKTIPCIMDG--KDVVAMSRTGSGKTAAFVIPMLQKLKR 88
Query: 553 NKXYP-QVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL-PRGSKITDH--IL 720
+ L +SPT ELA+QT +V ++ +F ++ V G+++ + S I ++ IL
Sbjct: 89 RDTTGIRALMVSPTRELALQTFKVVKELGRF-TGLRCACLVGGDQIEEQFSTIHENPDIL 147
Query: 721 IGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQMMFFS 900
+ TPG++ V+ + + ++ V DEAD + G Q Q K + + Q + FS
Sbjct: 148 LATPGRLLHVIVEMDL-RLSYVQYVVFDEADRLF-EMGFQDQLTETLKRIPESRQTLLFS 205
Query: 901 AT 906
AT
Sbjct: 206 AT 207
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 60.1 bits (139), Expect = 3e-09
Identities = 62/210 (29%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Frame = +1
Query: 352 KTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLA 531
KTF +L + K V G+ + IQ A +Q+G+GKTAAF+L
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYD--IMACAQTGSGKTAAFLLP 398
Query: 532 XLSR-VDSNK--------XYPQVLCLSPTYELAIQTGEVAAKMA-KFCPEIKLKYAVRGE 681
++R +D N YP+ + L+PT ELA Q K A + EIK Y
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAV 458
Query: 682 ELPRGS-KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGH--QXQCI 852
+G + I++GT G++ + + G + K + FVLDEAD MI+ G + I
Sbjct: 459 GYNKGQIEKGATIIVGTVGRIKHF-CEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETI 517
Query: 853 RIHKCL--XSTCQMMFFSATYGTAVMQLLR 936
+ + Q + FSAT+ +V + R
Sbjct: 518 VNYDSMPRKENRQTLMFSATFPDSVQEAAR 547
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 60.1 bits (139), Expect = 3e-09
Identities = 62/210 (29%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Frame = +1
Query: 352 KTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLA 531
KTF +L + K V G+ + IQ A +Q+G+GKTAAF+L
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYD--IMACAQTGSGKTAAFLLP 398
Query: 532 XLSR-VDSNK--------XYPQVLCLSPTYELAIQTGEVAAKMA-KFCPEIKLKYAVRGE 681
++R +D N YP+ + L+PT ELA Q K A + EIK Y
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAV 458
Query: 682 ELPRGS-KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGH--QXQCI 852
+G + I++GT G++ + + G + K + FVLDEAD MI+ G + I
Sbjct: 459 GYNKGQIEKGATIIVGTVGRIKHF-CEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETI 517
Query: 853 RIHKCL--XSTCQMMFFSATYGTAVMQLLR 936
+ + Q + FSAT+ +V + R
Sbjct: 518 VNYDSMPRKENRQTLMFSATFPDSVQEAAR 547
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 60.1 bits (139), Expect = 3e-09
Identities = 62/210 (29%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Frame = +1
Query: 352 KTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLA 531
KTF +L + K V G+ + IQ A +Q+G+GKTAAF+L
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYD--IMACAQTGSGKTAAFLLP 398
Query: 532 XLSR-VDSNK--------XYPQVLCLSPTYELAIQTGEVAAKMA-KFCPEIKLKYAVRGE 681
++R +D N YP+ + L+PT ELA Q K A + EIK Y
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAV 458
Query: 682 ELPRGS-KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGH--QXQCI 852
+G + I++GT G++ + + G + K + FVLDEAD MI+ G + I
Sbjct: 459 GYNKGQIEKGATIIVGTVGRIKHF-CEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETI 517
Query: 853 RIHKCL--XSTCQMMFFSATYGTAVMQLLR 936
+ + Q + FSAT+ +V + R
Sbjct: 518 VNYDSMPRKENRQTLMFSATFPDSVQEAAR 547
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 59.3 bits (137), Expect = 5e-09
Identities = 51/157 (32%), Positives = 75/157 (47%), Gaps = 10/157 (6%)
Frame = +1
Query: 490 SQSGTGKTAAFVLAXLSRVDSNKXY-----PQVLCLSPTYELAIQTGEVAAKMAKFCPEI 654
+++G+GKT AF+L L + P VL L PT ELA Q EV+ FC +
Sbjct: 173 AKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSID---FCHSL 229
Query: 655 KLKYAVRGEELPRGSKITD-----HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVM 819
LK +G + D I++ TPG++ D+ + G +M K VLDEAD M
Sbjct: 230 GLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLDF-LDNGTTNMKKCSYLVLDEADRM 288
Query: 820 INRQGHQXQCIRIHKCLXSTCQMMFFSATYGTAVMQL 930
++ G + Q +I + Q + FSAT+ V L
Sbjct: 289 LD-MGFEPQIKKIIGQIRPDRQTLMFSATWPKEVRAL 324
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 58.0 bits (134), Expect = 1e-08
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 9/203 (4%)
Frame = +1
Query: 355 TFXALH--LXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVL 528
TF +L + NLLK V GF ++IQ + A +++G+GKT AF+L
Sbjct: 67 TFASLEGKVNANLLKAVQGLGFTTMTEIQAKSIDPLLEG--KDVLASAKTGSGKTLAFLL 124
Query: 529 AXLSRVDSNKXYPQ----VLCLSPTYELAIQTGEVAAKM---AKFCPEIKLKYAVRGEEL 687
+ + V+ +SPT EL++QT V +++ + + + + R E
Sbjct: 125 PAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSNRSAEK 184
Query: 688 PRGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKC 867
+ +K IL+ TPG++ D F + +K ++DEAD +++ G + + ++ +
Sbjct: 185 DKLAKGVS-ILVATPGRLLDHLQNTDNFLVRNMKCLIIDEADRILD-IGFEIEMQQVLRH 242
Query: 868 LXSTCQMMFFSATYGTAVMQLLR 936
L Q M FSAT+ V +L++
Sbjct: 243 LPKQRQSMLFSATHSPKVDELVK 265
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 57.2 bits (132), Expect = 2e-08
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 15/210 (7%)
Frame = +1
Query: 352 KTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLA 531
KTF +L + K V G+ + IQ A +Q+G+GKTAAF+L
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQG--HDIMACAQTGSGKTAAFLLP 609
Query: 532 XLSR-VDSNK--------XYPQVLCLSPTYELAIQTGEVAAKMA-KFCPEIKLKYAVRGE 681
++R +D N YP+ + L+PT EL Q K A + EI+ Y
Sbjct: 610 IMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAV 669
Query: 682 ELPRGS-KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGH--QXQCI 852
+G + I++GT G++ + + G + K + FVLDEAD MI+ G I
Sbjct: 670 GYNKGQIEKGATIIVGTVGRIKHF-CEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTI 728
Query: 853 RIHKCL--XSTCQMMFFSATYGTAVMQLLR 936
++ + Q + FSAT+ +V + R
Sbjct: 729 VNYESMPKKENRQTLMFSATFPDSVQEAAR 758
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 57.2 bits (132), Expect = 2e-08
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 15/210 (7%)
Frame = +1
Query: 352 KTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLA 531
KTF +L + K V G+ + IQ A +Q+G+GKTAAF+L
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQG--HDIMACAQTGSGKTAAFLLP 609
Query: 532 XLSR-VDSNK--------XYPQVLCLSPTYELAIQTGEVAAKMA-KFCPEIKLKYAVRGE 681
++R +D N YP+ + L+PT EL Q K A + EI+ Y
Sbjct: 610 IMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAV 669
Query: 682 ELPRGS-KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGH--QXQCI 852
+G + I++GT G++ + + G + K + FVLDEAD MI+ G I
Sbjct: 670 GYNKGQIEKGATIIVGTVGRIKHF-CEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTI 728
Query: 853 RIHKCL--XSTCQMMFFSATYGTAVMQLLR 936
++ + Q + FSAT+ +V + R
Sbjct: 729 VNYESMPKKENRQTLMFSATFPDSVQEAAR 758
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 57.2 bits (132), Expect = 2e-08
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 15/210 (7%)
Frame = +1
Query: 352 KTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLA 531
KTF +L + K V G+ + IQ A +Q+G+GKTAAF+L
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQG--HDIMACAQTGSGKTAAFLLP 609
Query: 532 XLSR-VDSNK--------XYPQVLCLSPTYELAIQTGEVAAKMA-KFCPEIKLKYAVRGE 681
++R +D N YP+ + L+PT EL Q K A + EI+ Y
Sbjct: 610 IMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAV 669
Query: 682 ELPRGS-KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGH--QXQCI 852
+G + I++GT G++ + + G + K + FVLDEAD MI+ G I
Sbjct: 670 GYNKGQIEKGATIIVGTVGRIKHF-CEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTI 728
Query: 853 RIHKCL--XSTCQMMFFSATYGTAVMQLLR 936
++ + Q + FSAT+ +V + R
Sbjct: 729 VNYESMPKKENRQTLMFSATFPDSVQEAAR 758
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 56.4 bits (130), Expect = 4e-08
Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 19/190 (10%)
Frame = +1
Query: 346 SVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFV 525
+++ F P +++ V G+ P+ +Q AQ+ G+GKTAAF+
Sbjct: 137 AIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQT--GSGKTAAFL 194
Query: 526 LAXLSRV-----DSNKX----------YPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKL 660
L + + D K YP L LSPT ELAIQ + A K + + I+
Sbjct: 195 LPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFS-YKSNIQT 253
Query: 661 KYAVRGEELPRGS----KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINR 828
G E R + HILI TPG++ D ++ G + + VLDEAD M++
Sbjct: 254 AILYGGRENYRDQVNRLRAGTHILIATPGRLIDI-IEQGFIGLAGCRYLVLDEADRMLD- 311
Query: 829 QGHQXQCIRI 858
G + Q +I
Sbjct: 312 MGFEPQIRKI 321
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 56.4 bits (130), Expect = 4e-08
Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 19/190 (10%)
Frame = +1
Query: 346 SVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFV 525
+++ F P +++ V G+ P+ +Q AQ+ G+GKTAAF+
Sbjct: 121 AIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQT--GSGKTAAFL 178
Query: 526 LAXLSRV-----DSNKX----------YPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKL 660
L + + D K YP L LSPT ELAIQ + A K + + I+
Sbjct: 179 LPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFS-YKSNIQT 237
Query: 661 KYAVRGEELPRGS----KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINR 828
G E R + HILI TPG++ D ++ G + + VLDEAD M++
Sbjct: 238 AILYGGRENYRDQVNRLRAGTHILIATPGRLIDI-IEQGFIGLAGCRYLVLDEADRMLD- 295
Query: 829 QGHQXQCIRI 858
G + Q +I
Sbjct: 296 MGFEPQIRKI 305
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 56.4 bits (130), Expect = 4e-08
Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 19/190 (10%)
Frame = +1
Query: 346 SVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFV 525
+++ F P +++ V G+ P+ +Q AQ+ G+GKTAAF+
Sbjct: 118 AIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQT--GSGKTAAFL 175
Query: 526 LAXLSRV-----DSNKX----------YPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKL 660
L + + D K YP L LSPT ELAIQ + A K + + I+
Sbjct: 176 LPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFS-YKSNIQT 234
Query: 661 KYAVRGEELPRGS----KITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINR 828
G E R + HILI TPG++ D ++ G + + VLDEAD M++
Sbjct: 235 AILYGGRENYRDQVNRLRAGTHILIATPGRLIDI-IEQGFIGLAGCRYLVLDEADRMLD- 292
Query: 829 QGHQXQCIRI 858
G + Q +I
Sbjct: 293 MGFEPQIRKI 302
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 55.6 bits (128), Expect = 7e-08
Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 3/198 (1%)
Frame = +1
Query: 352 KTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLA 531
K+F L + L G+ PSKIQ A++ G+GKT AF +
Sbjct: 44 KSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAET--GSGKTGAFAIP 101
Query: 532 XLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKIT- 708
L + + L L+PT ELA Q G+ + I V G ++ +
Sbjct: 102 VLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAA-VIVGGVDMAAQAMALA 160
Query: 709 --DHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTC 882
HI++ TPG++ D F++ +K ++DEAD ++N + + +I K +
Sbjct: 161 RRPHIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILN-MDFEVELDKILKVIPRER 219
Query: 883 QMMFFSATYGTAVMQLLR 936
+ FSAT V +L R
Sbjct: 220 RTYLFSATMTKKVSKLER 237
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 54.8 bits (126), Expect = 1e-07
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 6/153 (3%)
Frame = +1
Query: 355 TFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAX 534
+F ++L +LK G+ P+ IQ + A + +GTGKTAAFVL
Sbjct: 149 SFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTG--KDICACAATGTGKTAAFVLPI 206
Query: 535 LSRV---DSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL---PRG 696
L R+ +VL L PT ELAIQ +V K++ F ++++ G +L
Sbjct: 207 LERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFI-QLEVCLCAGGLDLKAQEAA 265
Query: 697 SKITDHILIGTPGKMFDWGVKFGMFDMGKIKVF 795
+ +++ TPG++ D F++ I+VF
Sbjct: 266 LRSGPDVVVATPGRLIDHLHNSPSFNLSNIEVF 298
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 54.4 bits (125), Expect = 2e-07
Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 15/223 (6%)
Frame = +1
Query: 313 IQRXAPXSPLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQS 492
+ R P + + K+F + ++ + V G+ + IQ + A +
Sbjct: 286 VSRGQPVT-IQPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADG--KDILACA 342
Query: 493 QSGTGKTAAFVLAXLSRVDSNK---------XYPQVLCLSPTYELAIQTGEVAAKMA-KF 642
Q+G+GKTAAF+L +SR+ K YP+ + L+PT ELA Q K + +
Sbjct: 343 QTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQS 402
Query: 643 CPEIKLKYAVRGEELPRGSKITD-HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVM 819
EIK Y + + I++GT G++ + + G + K + VLDEAD M
Sbjct: 403 VMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRVKHF-CEDGAIKLDKCRYLVLDEADRM 461
Query: 820 INRQGHQXQCIRI--HKCLXST--CQMMFFSATYGTAVMQLLR 936
I+ G + +I +K + Q M FSAT+ ++V + R
Sbjct: 462 IDSMGFGPEIEQIINYKNMPKNDKRQTMMFSATFPSSVQEAAR 504
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 54.4 bits (125), Expect = 2e-07
Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 15/223 (6%)
Frame = +1
Query: 313 IQRXAPXSPLYSVKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQS 492
+ R P + + K+F + ++ + V G+ + IQ + A +
Sbjct: 286 VSRGQPVT-IQPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADG--KDILACA 342
Query: 493 QSGTGKTAAFVLAXLSRVDSNK---------XYPQVLCLSPTYELAIQTGEVAAKMA-KF 642
Q+G+GKTAAF+L +SR+ K YP+ + L+PT ELA Q K + +
Sbjct: 343 QTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQS 402
Query: 643 CPEIKLKYAVRGEELPRGSKITD-HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVM 819
EIK Y + + I++GT G++ + + G + K + VLDEAD M
Sbjct: 403 VMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRVKHF-CEDGAIKLDKCRYLVLDEADRM 461
Query: 820 INRQGHQXQCIRI--HKCLXST--CQMMFFSATYGTAVMQLLR 936
I+ G + +I +K + Q M FSAT+ ++V + R
Sbjct: 462 IDSMGFGPEIEQIINYKNMPKNDKRQTMMFSATFPSSVQEAAR 504
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 54.4 bits (125), Expect = 2e-07
Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 7/156 (4%)
Frame = +1
Query: 490 SQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYA 669
+++GTGKT AF + L ++ + L L+PT ELA Q E + K +K
Sbjct: 133 ARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPI-TLKCSVI 191
Query: 670 VRGEEL---PRGSKITDHILIGTPGKMFDWGVKFGMFDMG----KIKVFVLDEADVMINR 828
V G L R H+++ TPG++ D ++ + KI+ FVLDEAD M+
Sbjct: 192 VGGRSLIHQARELSERPHVVVATPGRLADL-IESDPDTIAKVFKKIQFFVLDEADRMLEG 250
Query: 829 QGHQXQCIRIHKCLXSTCQMMFFSATYGTAVMQLLR 936
Q + Q I + + Q + SAT + L R
Sbjct: 251 Q-YNDQLKPIFESISEKRQTLLLSATITNNINMLHR 285
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 54.4 bits (125), Expect = 2e-07
Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 7/156 (4%)
Frame = +1
Query: 490 SQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYA 669
+++GTGKT AF + L ++ + L L+PT ELA Q E + K +K
Sbjct: 133 ARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPI-TLKCSVI 191
Query: 670 VRGEEL---PRGSKITDHILIGTPGKMFDWGVKFGMFDMG----KIKVFVLDEADVMINR 828
V G L R H+++ TPG++ D ++ + KI+ FVLDEAD M+
Sbjct: 192 VGGRSLIHQARELSERPHVVVATPGRLADL-IESDPDTIAKVFKKIQFFVLDEADRMLEG 250
Query: 829 QGHQXQCIRIHKCLXSTCQMMFFSATYGTAVMQLLR 936
Q + Q I + + Q + SAT + L R
Sbjct: 251 Q-YNDQLKPIFESISEKRQTLLLSATITNNINMLHR 285
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 53.6 bits (123), Expect = 3e-07
Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 19/192 (9%)
Frame = +1
Query: 349 VKTFXALHLXPNLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVL 528
+ F L L + + + G+ P+ +Q AQ+ G+GKTAAF++
Sbjct: 165 ISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQT--GSGKTAAFLV 222
Query: 529 AXLSRV----------------DSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFCP-EIK 657
++ + K YP L LSPT EL++Q + K A P
Sbjct: 223 PLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKFAYRTPITSA 282
Query: 658 LKYAVRGEELPRGSKIT--DHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQ 831
L Y R + K+ HILI TPG++ D + G+ M + VLDEAD M++
Sbjct: 283 LLYGGRENYKDQIHKLRLGCHILIATPGRLID-VMDQGLIGMEGCRYLVLDEADRMLD-M 340
Query: 832 GHQXQCIRIHKC 867
G + Q +I +C
Sbjct: 341 GFEPQIRQIVEC 352
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 52.4 bits (120), Expect = 6e-07
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 12/161 (7%)
Frame = +1
Query: 490 SQSGTGKTAAFVLAXLSRVDSNKXY-----PQVLCLSPTYELAIQTGEVAAKMAKFCPEI 654
+++G+GKT AF+L + P + L+PT ELA+QT + A K AK +
Sbjct: 348 AKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAK---PL 404
Query: 655 KLKYAVRGEELPRGSKITD-----HILIGTPGKMFD-WGVKFG-MFDMGKIKVFVLDEAD 813
LK A + +I D I++ TPG+M D G + ++ ++ VLDEAD
Sbjct: 405 GLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEAD 464
Query: 814 VMINRQGHQXQCIRIHKCLXSTCQMMFFSATYGTAVMQLLR 936
M ++ G + Q +++ + Q + FSAT+ + L R
Sbjct: 465 RMFDK-GFEPQIMKVVNNIRPDKQTVLFSATFPRHMEALAR 504
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 51.2 bits (117), Expect = 1e-06
Identities = 57/195 (29%), Positives = 81/195 (41%), Gaps = 12/195 (6%)
Frame = +1
Query: 382 NLLKGVXAXGFXAPSKIQXXXXXXXXXXXXQXXXAQSQSGTGKTAAFVLAXLSRVDS--- 552
+++ + GF PS IQ Q SQ+G+GKT AF+L L +D+
Sbjct: 94 SIMGEIRKNGFEKPSPIQSQMWPLLLSG--QDCIGVSQTGSGKTLAFLLPALLHIDAQLA 151
Query: 553 --------NKXYPQVLCLSPTYELAIQ-TGEVAAKMAKFCPEIKLKYAVRGEELPRGSKI 705
K P VL LSPT ELA Q GEV + L E +
Sbjct: 152 QYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYNGYKSVCLYGGGSRPEQVEACRG 211
Query: 706 TDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQXQCIRIHKCLXSTCQ 885
I+I TPG++ D G+ + + VLDEAD M++ G + RI +
Sbjct: 212 GVEIVIATPGRLTDLS-NDGVISLASVTYVVLDEADRMLD-MGFEVAIRRILFEIRPDRL 269
Query: 886 MMFFSATYGTAVMQL 930
+ SAT+ V +L
Sbjct: 270 VALTSATWPEGVRKL 284
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 48.8 bits (111), Expect = 8e-06
Identities = 46/154 (29%), Positives = 67/154 (43%), Gaps = 5/154 (3%)
Frame = +1
Query: 490 SQSGTGKTAAFVLAXLSRVDSNKXYPQ----VLCLSPTYELAIQT-GEVAAKMAKFCPEI 654
+++G+GKT A V+ L + K P L +SPT ELA+QT + A A
Sbjct: 120 AKTGSGKTLALVIPVLEALWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGFSC 179
Query: 655 KLKYAVRGEELPRGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQG 834
L R +I++ TPG++ + ++V VLDEAD M++ G
Sbjct: 180 GLVIGGSDVAFERNRISGINIIVCTPGRLLQHMDENAQMSCDSLQVLVLDEADRMLD-MG 238
Query: 835 HQXQCIRIHKCLXSTCQMMFFSATYGTAVMQLLR 936
Q I L + Q + FSAT V L R
Sbjct: 239 FSKQLNSIINNLPAERQTLLFSATQTRNVKDLCR 272
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 44.4 bits (100), Expect = 2e-04
Identities = 41/150 (27%), Positives = 68/150 (45%), Gaps = 10/150 (6%)
Frame = +1
Query: 487 QSQSGTGKTAAFVLAXLSRVDSNKXYPQ---VLCLSPTYELAIQTGEVAAKMAKFCPEIK 657
+S +G+GKT AFVL + + + K P L LSP+ EL Q V A+ +
Sbjct: 52 ESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKL-NLT 110
Query: 658 LKYAVRGEELPRGSKI----TDHILIGTPGKMF---DWGVKFGMFDMGKIKVFVLDEADV 816
++ G+++ + K+ +IL+ TPG++F M +++ V+DEAD
Sbjct: 111 VETVTGGQKVDKNIKMFKNKNVNILVATPGRLFQIIQHEKTLIARKMRTLQLLVIDEAD- 169
Query: 817 MINRQGHQXQCIRIHKCLXSTCQMMFFSAT 906
N + I C+ + FSAT
Sbjct: 170 RFNEIQFEDHMREILSCIPKQRRTGLFSAT 199
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 42.3 bits (95), Expect = 7e-04
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 18/160 (11%)
Frame = +1
Query: 484 AQSQSGTGKTAAFVLAXLSR----------VDSNKXYPQVLCLSPTYELAIQTGEVAAKM 633
A + +G+GKT AF++ + + V K P++L ++PT EL QT A ++
Sbjct: 778 ACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQL 837
Query: 634 AKFCPEIKLKYAVRGEELPRGSKITD-------HILIGTPGKMFDWGVKFGMFDMGKIKV 792
E LK + R + + +IL+ T G++ D+ V G + K+K
Sbjct: 838 TY---ETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRLQDF-VNAGEVSLSKMKY 893
Query: 793 FVLDEADVMINRQGHQXQCIRIHKCLXS-TCQMMFFSATY 909
VLDEAD M++ + +I T Q + FSA++
Sbjct: 894 IVLDEADRMVDSNDFGEEVSKIIGSPGERTQQTVLFSASF 933
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 42.3 bits (95), Expect = 7e-04
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 18/160 (11%)
Frame = +1
Query: 484 AQSQSGTGKTAAFVLAXLSR----------VDSNKXYPQVLCLSPTYELAIQTGEVAAKM 633
A + +G+GKT AF++ + + V K P++L ++PT EL QT A ++
Sbjct: 778 ACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQL 837
Query: 634 AKFCPEIKLKYAVRGEELPRGSKITD-------HILIGTPGKMFDWGVKFGMFDMGKIKV 792
E LK + R + + +IL+ T G++ D+ V G + K+K
Sbjct: 838 TY---ETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRLQDF-VNAGEVSLSKMKY 893
Query: 793 FVLDEADVMINRQGHQXQCIRIHKCLXS-TCQMMFFSATY 909
VLDEAD M++ + +I T Q + FSA++
Sbjct: 894 IVLDEADRMVDSNDFGEEVSKIIGSPGERTQQTVLFSASF 933
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 41.5 bits (93), Expect = 0.001
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 22/168 (13%)
Frame = +1
Query: 487 QSQSGTGKTAAF---VLAXLSRVDS---NKXY----PQVLCLSPTYELAIQTGEVAAKMA 636
Q+++ GKTAAF ++ + R+D NK P L L+PT ELA Q E +
Sbjct: 424 QAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEA---LR 480
Query: 637 KFCPEIKLKYAVRGEELPRGSKITD-----HILIGTPGKMFDWGVKFGMFDMGKIKVFVL 801
+C + + + R + + ILIGT G++ D+ VK + ++ V
Sbjct: 481 TYCQNTDIIVLLSYGQSDRARSLNEIRNGCDILIGTCGRIMDFTVK-SHISLLHLRFLVF 539
Query: 802 DEADVMINRQ-----GHQXQCIRIHKCLXS--TCQMMFFSATYGTAVM 924
DEAD ++ GH I+ + S T Q + SAT+ +VM
Sbjct: 540 DEADRLLQDMKKDPLGHLGAIIKDAGFMESAATRQTIMTSATFNASVM 587
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 39.1 bits (87), Expect = 0.006
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 12/124 (9%)
Frame = +1
Query: 490 SQSGTGKTAAFVLAXL---------SRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKF 642
+++G+GKTAAF+L L R + P + ++PT ELA Q E K K
Sbjct: 345 AETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKL 404
Query: 643 CPEIKLKYAVRG---EELPRGSKITDHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEAD 813
IK + G E+ ++ ++I TPG++ D ++ + + +LDEAD
Sbjct: 405 L-GIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLD-VLENRYLLLNQCTYVILDEAD 462
Query: 814 VMIN 825
M++
Sbjct: 463 RMLD 466
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 37.9 bits (84), Expect = 0.014
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 16/155 (10%)
Frame = +1
Query: 490 SQSGTGKTAAFVLAXLSR-VDSNKXYPQV-------LCLSPTYELAIQTGEVAAKMAKFC 645
+ +G+GKT FVL + ++ P + L + P+ ELA Q ++ +M
Sbjct: 234 ASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDAL 293
Query: 646 -----PEIKLKYAVRGEELPRGSK-ITD--HILIGTPGKMFDWGVKFGMFDMGKIKVFVL 801
PE++ + G + +K + D HI++ TPG++ D K + ++ + VL
Sbjct: 294 GKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVATPGRLSDMLTK-KIINLEVCRYLVL 352
Query: 802 DEADVMINRQGHQXQCIRIHKCLXSTCQMMFFSAT 906
DEAD M++ G + + I + Q + FSAT
Sbjct: 353 DEADRMLD-MGFEDEIKSIFYFFKAQRQTLLFSAT 386
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 33.9 bits (74), Expect = 0.23
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 8/131 (6%)
Frame = +1
Query: 484 AQSQSGTGKTAAFVLAXLSRVDSNKXYPQVLCLSPTYELAIQTGEVAAKMAKFC--PEIK 657
A +Q+ G + A +DS+ P + L PT EL QT + A P+I+
Sbjct: 257 AVAQAEDGNLKWWSAAEQLSIDSST--PLCVILEPTRELVQQTFQNIQTFASVLDSPKIR 314
Query: 658 LKYAVRGEELPRGSKITD---HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMI-- 822
GE + + + + I++GTP ++FD + G ++ V+DE D +
Sbjct: 315 CVTLAAGENMNQILRTLETGCDIVVGTPSRVFDL-IHTGKLATKNLQFVVIDEIDQFLAG 373
Query: 823 -NRQGHQXQCI 852
N HQ + I
Sbjct: 374 KNNCAHQIESI 384
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,604,190
Number of Sequences: 27780
Number of extensions: 324196
Number of successful extensions: 774
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3359895476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -