Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_I15
         (1157 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024777-4|AAF60561.3|  627|Caenorhabditis elegans Hypothetical ...    30   3.6  
U50069-2|AAB37558.1|  328|Caenorhabditis elegans Hypothetical pr...    29   6.2  
AL032631-6|CAA21574.1|  234|Caenorhabditis elegans Hypothetical ...    29   6.2  
Z73105-2|CAA97439.2|  803|Caenorhabditis elegans Hypothetical pr...    29   8.2  
U23525-10|AAC46571.2|  503|Caenorhabditis elegans Hypothetical p...    29   8.2  
U23525-9|ABC71820.1|  766|Caenorhabditis elegans Hypothetical pr...    29   8.2  
AF000263-4|AAG00016.1|  159|Caenorhabditis elegans Hypothetical ...    29   8.2  

>AC024777-4|AAF60561.3|  627|Caenorhabditis elegans Hypothetical
           protein Y42H9AR.4 protein.
          Length = 627

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = +1

Query: 394 FETFAHRSFLPKMITTKVRNTN--VTDPVTDIMSKKIDWNQPWQYQYR 531
           F T+  +SF+ K+ T  +      V DP +D   +K   N+PW+Y+ R
Sbjct: 175 FWTWCRKSFMGKIDTQFLEEFKEIVLDPYSDEALQKYFVNEPWKYRKR 222


>U50069-2|AAB37558.1|  328|Caenorhabditis elegans Hypothetical
           protein C09B9.2 protein.
          Length = 328

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 11/44 (25%), Positives = 23/44 (52%)
 Frame = -3

Query: 183 LLFGFPYNILFIFFHYFIKSSFIVNEYFISKFKEARTKTNQNTC 52
           L   + + +LF+ F +F++SSF     F+ +       ++ +TC
Sbjct: 129 LFLSYHFVLLFLMFSFFLQSSFSSKSRFVEQIFGMSAVSSMSTC 172


>AL032631-6|CAA21574.1|  234|Caenorhabditis elegans Hypothetical
           protein Y106G6H.4 protein.
          Length = 234

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
 Frame = +1

Query: 460 VTDPVTDIMSKKIDWNQPWQYQYRKLISLKARKQ---KVYEWLNEE-VLHCPKDLVEVAE 627
           VTD V   M + I          R+ +S  ARK    +V E +N++ VL  P  + E+ +
Sbjct: 45  VTDSVRFAMCEAIAHRPGLWDSTREKVSSAARKNLFAEVVEVINQQFVLSPPLTIEEIEK 104

Query: 628 HWEKDPDIY 654
           HW+   D Y
Sbjct: 105 HWKNLKDTY 113


>Z73105-2|CAA97439.2|  803|Caenorhabditis elegans Hypothetical
           protein R13.4 protein.
          Length = 803

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 19/74 (25%), Positives = 38/74 (51%)
 Frame = +1

Query: 640 DPDIYFDASYNWYYAGNGNMQMISIGGDDYLVHSDMNCLYLSLFNRNNLTIEYEYEAKYK 819
           DP+I ++   N     N +MQ+ SI   D+L+ S MN +++     N     Y+Y  ++ 
Sbjct: 388 DPNIQYEVYINQKSVMNSHMQVKSIFIKDFLI-SGMNSIHIVY---NGPQQMYKYACEFV 443

Query: 820 FPEKMLILETVVLQ 861
             + ++ L  +++Q
Sbjct: 444 TRKSVIELRKILIQ 457


>U23525-10|AAC46571.2|  503|Caenorhabditis elegans Hypothetical
           protein K11G12.6a protein.
          Length = 503

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 13/45 (28%), Positives = 26/45 (57%)
 Frame = -1

Query: 905 LRMTTLYLVRTAIIFCNTTVSSINIFSGNLYFASYSYSMVRLFLL 771
           L +  L  VR  + FC   ++++ +F+GN  F +Y+  ++ + LL
Sbjct: 106 LFLIPLIHVRYFVFFCQVLLTTLTLFTGNNGFFNYNILVLMVSLL 150


>U23525-9|ABC71820.1|  766|Caenorhabditis elegans Hypothetical
           protein K11G12.6b protein.
          Length = 766

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 13/45 (28%), Positives = 26/45 (57%)
 Frame = -1

Query: 905 LRMTTLYLVRTAIIFCNTTVSSINIFSGNLYFASYSYSMVRLFLL 771
           L +  L  VR  + FC   ++++ +F+GN  F +Y+  ++ + LL
Sbjct: 369 LFLIPLIHVRYFVFFCQVLLTTLTLFTGNNGFFNYNILVLMVSLL 413


>AF000263-4|AAG00016.1|  159|Caenorhabditis elegans Hypothetical
           protein T08B2.8 protein.
          Length = 159

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = +1

Query: 439 TKVRNTNVTDPVTDIMSKKIDWNQPWQYQYRKLISLKARKQKVYEWLNE 585
           TK+ +  V D  T++    I WN    +QY+K +     K+  Y ++++
Sbjct: 61  TKIYDLPVRDVRTEVQMGDITWNSKLDHQYKKAMWKDEDKKIAYVFMSK 109


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,899,847
Number of Sequences: 27780
Number of extensions: 452365
Number of successful extensions: 1330
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1330
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3151206316
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)