Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_I10
         (1194 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X65923-1|CAA46716.1|  133|Homo sapiens fau protein.                    45   5e-04
X65921-1|CAA46714.1|  133|Homo sapiens fau 1 protein.                  45   5e-04
CR541974-1|CAG46772.1|  133|Homo sapiens FAU protein.                  45   5e-04
BC033877-1|AAH33877.1|  133|Homo sapiens Finkel-Biskis-Reilly mu...    45   5e-04
AY398663-1|AAQ87877.1|  133|Homo sapiens Finkel-Biskis-Reilly mu...    45   5e-04
AK026639-1|BAB15515.1|  133|Homo sapiens protein ( Homo sapiens ...    45   5e-04
X75315-1|CAA53064.1|  230|Homo sapiens SEB4B protein.                  32   4.7  

>X65923-1|CAA46716.1|  133|Homo sapiens fau protein.
          Length = 133

 Score = 45.2 bits (102), Expect = 5e-04
 Identities = 21/33 (63%), Positives = 24/33 (72%)
 Frame = +3

Query: 306 GGKVXGSLDRAGXVKGQTPKVEKXQXKXQXXGR 404
           GGKV GSL RAG V+GQTPKV K + K +  GR
Sbjct: 73  GGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGR 105



 Score = 41.5 bits (93), Expect = 0.006
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +2

Query: 416 RIQYNRRFVXVVQTFXXRRGPNSNS 490
           R+QYNRRFV VV TF  ++GPN+NS
Sbjct: 109 RMQYNRRFVNVVPTFGKKKGPNANS 133


>X65921-1|CAA46714.1|  133|Homo sapiens fau 1 protein.
          Length = 133

 Score = 45.2 bits (102), Expect = 5e-04
 Identities = 21/33 (63%), Positives = 24/33 (72%)
 Frame = +3

Query: 306 GGKVXGSLDRAGXVKGQTPKVEKXQXKXQXXGR 404
           GGKV GSL RAG V+GQTPKV K + K +  GR
Sbjct: 73  GGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGR 105



 Score = 41.5 bits (93), Expect = 0.006
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +2

Query: 416 RIQYNRRFVXVVQTFXXRRGPNSNS 490
           R+QYNRRFV VV TF  ++GPN+NS
Sbjct: 109 RMQYNRRFVNVVPTFGKKKGPNANS 133


>CR541974-1|CAG46772.1|  133|Homo sapiens FAU protein.
          Length = 133

 Score = 45.2 bits (102), Expect = 5e-04
 Identities = 21/33 (63%), Positives = 24/33 (72%)
 Frame = +3

Query: 306 GGKVXGSLDRAGXVKGQTPKVEKXQXKXQXXGR 404
           GGKV GSL RAG V+GQTPKV K + K +  GR
Sbjct: 73  GGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGR 105



 Score = 41.5 bits (93), Expect = 0.006
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +2

Query: 416 RIQYNRRFVXVVQTFXXRRGPNSNS 490
           R+QYNRRFV VV TF  ++GPN+NS
Sbjct: 109 RMQYNRRFVNVVPTFGKKKGPNANS 133


>BC033877-1|AAH33877.1|  133|Homo sapiens Finkel-Biskis-Reilly
           murine sarcoma virus (FBR-MuSV) ubiquitously expressed
           protein.
          Length = 133

 Score = 45.2 bits (102), Expect = 5e-04
 Identities = 21/33 (63%), Positives = 24/33 (72%)
 Frame = +3

Query: 306 GGKVXGSLDRAGXVKGQTPKVEKXQXKXQXXGR 404
           GGKV GSL RAG V+GQTPKV K + K +  GR
Sbjct: 73  GGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGR 105



 Score = 41.5 bits (93), Expect = 0.006
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +2

Query: 416 RIQYNRRFVXVVQTFXXRRGPNSNS 490
           R+QYNRRFV VV TF  ++GPN+NS
Sbjct: 109 RMQYNRRFVNVVPTFGKKKGPNANS 133


>AY398663-1|AAQ87877.1|  133|Homo sapiens Finkel-Biskis-Reilly
           murine sarcoma virus (FBR-MuSV) ubiquitously expressed
           (fo protein.
          Length = 133

 Score = 45.2 bits (102), Expect = 5e-04
 Identities = 21/33 (63%), Positives = 24/33 (72%)
 Frame = +3

Query: 306 GGKVXGSLDRAGXVKGQTPKVEKXQXKXQXXGR 404
           GGKV GSL RAG V+GQTPKV K + K +  GR
Sbjct: 73  GGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGR 105



 Score = 41.5 bits (93), Expect = 0.006
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +2

Query: 416 RIQYNRRFVXVVQTFXXRRGPNSNS 490
           R+QYNRRFV VV TF  ++GPN+NS
Sbjct: 109 RMQYNRRFVNVVPTFGKKKGPNANS 133


>AK026639-1|BAB15515.1|  133|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22986 fis, clone KAT11742. ).
          Length = 133

 Score = 45.2 bits (102), Expect = 5e-04
 Identities = 21/33 (63%), Positives = 24/33 (72%)
 Frame = +3

Query: 306 GGKVXGSLDRAGXVKGQTPKVEKXQXKXQXXGR 404
           GGKV GSL RAG V+GQTPKV K + K +  GR
Sbjct: 73  GGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGR 105



 Score = 41.5 bits (93), Expect = 0.006
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +2

Query: 416 RIQYNRRFVXVVQTFXXRRGPNSNS 490
           R+QYNRRFV VV TF  ++GPN+NS
Sbjct: 109 RMQYNRRFVNVVPTFGKKKGPNANS 133


>X75315-1|CAA53064.1|  230|Homo sapiens SEB4B protein.
          Length = 230

 Score = 31.9 bits (69), Expect = 4.7
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = +2

Query: 416 RIQYNRRFVXVVQTFXXRRG 475
           R+QYNRRFV VV TF  ++G
Sbjct: 2   RMQYNRRFVNVVPTFGKKKG 21


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,956,375
Number of Sequences: 237096
Number of extensions: 1090758
Number of successful extensions: 1008
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16789100150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)