Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_I10
         (1194 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071683-1|AAL49305.2|  147|Drosophila melanogaster RH08962p pro...    49   1e-05
AE014297-2878|AAN13838.1|  132|Drosophila melanogaster CG15697-P...    49   1e-05
AE014297-2877|AAF55815.1|  132|Drosophila melanogaster CG15697-P...    49   1e-05

>AY071683-1|AAL49305.2|  147|Drosophila melanogaster RH08962p
           protein.
          Length = 147

 Score = 48.8 bits (111), Expect = 1e-05
 Identities = 23/33 (69%), Positives = 25/33 (75%)
 Frame = +3

Query: 306 GGKVXGSLDRAGXVKGQTPKVEKXQXKXQXXGR 404
           GGKV GSL RAG VKGQTPKVEK + K +  GR
Sbjct: 86  GGKVHGSLARAGKVKGQTPKVEKQEKKKKKTGR 118



 Score = 42.7 bits (96), Expect = 0.001
 Identities = 19/25 (76%), Positives = 20/25 (80%)
 Frame = +2

Query: 416 RIQYNRRFVXVVQTFXXRRGPNSNS 490
           RIQYNRRFV  VQ F  RRGPN+NS
Sbjct: 122 RIQYNRRFVNFVQGFGRRRGPNANS 146


>AE014297-2878|AAN13838.1|  132|Drosophila melanogaster CG15697-PB,
           isoform B protein.
          Length = 132

 Score = 48.8 bits (111), Expect = 1e-05
 Identities = 23/33 (69%), Positives = 25/33 (75%)
 Frame = +3

Query: 306 GGKVXGSLDRAGXVKGQTPKVEKXQXKXQXXGR 404
           GGKV GSL RAG VKGQTPKVEK + K +  GR
Sbjct: 71  GGKVHGSLARAGKVKGQTPKVEKQEKKKKKTGR 103



 Score = 42.7 bits (96), Expect = 0.001
 Identities = 19/25 (76%), Positives = 20/25 (80%)
 Frame = +2

Query: 416 RIQYNRRFVXVVQTFXXRRGPNSNS 490
           RIQYNRRFV  VQ F  RRGPN+NS
Sbjct: 107 RIQYNRRFVNFVQGFGRRRGPNANS 131


>AE014297-2877|AAF55815.1|  132|Drosophila melanogaster CG15697-PA,
           isoform A protein.
          Length = 132

 Score = 48.8 bits (111), Expect = 1e-05
 Identities = 23/33 (69%), Positives = 25/33 (75%)
 Frame = +3

Query: 306 GGKVXGSLDRAGXVKGQTPKVEKXQXKXQXXGR 404
           GGKV GSL RAG VKGQTPKVEK + K +  GR
Sbjct: 71  GGKVHGSLARAGKVKGQTPKVEKQEKKKKKTGR 103



 Score = 42.7 bits (96), Expect = 0.001
 Identities = 19/25 (76%), Positives = 20/25 (80%)
 Frame = +2

Query: 416 RIQYNRRFVXVVQTFXXRRGPNSNS 490
           RIQYNRRFV  VQ F  RRGPN+NS
Sbjct: 107 RIQYNRRFVNFVQGFGRRRGPNANS 131


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,873,769
Number of Sequences: 53049
Number of extensions: 308269
Number of successful extensions: 444
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 444
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6315662550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)