Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_I08
         (1250 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0384 - 7972067-7972162,7972776-7972985,7973083-7973286,797...    31   1.4  
06_02_0097 + 11710560-11710859,11712605-11713270                       30   4.4  
09_04_0260 - 16197522-16197669,16198027-16198130,16198508-161987...    29   5.8  
05_06_0276 + 26878732-26879574,26879920-26880387,26880800-268810...    29   5.8  
03_02_0703 - 10535082-10536779                                         29   5.8  

>03_02_0384 -
           7972067-7972162,7972776-7972985,7973083-7973286,
           7973381-7973497,7973692-7973810,7974001-7974341,
           7974492-7974646,7974948-7975109,7975262-7975321
          Length = 487

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
 Frame = +3

Query: 159 QNEGEDDEQKIPQSAT-SPVTSXKISSEAASLTSKNHEKVLTSTGNSLNESTKVSYVNER 335
           QNE +DD++   +  + SPV + K   +  S   +++    T  G+  + +  VS  N++
Sbjct: 307 QNESDDDDEDTDEDESPSPVLAPKQQDQLKSEPQEDNHSKPTVLGHPYS-TPHVSKSNQK 365

Query: 336 RLQRDFMRSNYTNRPKNIPKETPDVKNM 419
           R QR    S     PK  PK  PD K +
Sbjct: 366 RRQRG-DDSKTCATPKK-PKIEPDTKKI 391


>06_02_0097 + 11710560-11710859,11712605-11713270
          Length = 321

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -2

Query: 652 FDNCSKLXTSCSILSLDAEFSKLSSVGLSTSAHKRKCNLAKCSC 521
           F   SKL   C I S DA+F++  ++     + K  C+ AK  C
Sbjct: 109 FSCWSKLSNKCHICSRDAKFARNIALEKIVESIKSSCSYAKWGC 152


>09_04_0260 -
           16197522-16197669,16198027-16198130,16198508-16198719,
           16198795-16198900,16199006-16199119,16199200-16199417,
           16199837-16199900,16199982-16200335,16200609-16200767,
           16201486-16202907
          Length = 966

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
 Frame = +3

Query: 471 AFGSGCSMEQMI---NIRDQQEHLARLHFRLCADVDKPT-EDNFEN 596
           +F S C ++  +   NI D  E L  +H   C D DKP  E N +N
Sbjct: 435 SFNSSCEVQCPLCGSNISDLSEELRLVHTNSCLDGDKPAKEPNSDN 480


>05_06_0276 +
           26878732-26879574,26879920-26880387,26880800-26881021,
           26881153-26881278,26881309-26881573,26881719-26881936
          Length = 713

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -3

Query: 498 VPCYNLIQKHLTFLCENHLIAQVVLSPCS*HLGFLLVCSWVCWY 367
           VPC     K + +LC   +  Q V++ C   + F  V S   W+
Sbjct: 598 VPCVVPNNKFMQYLCRKGMTTQNVMAACDFDMRFTFVLSGWAWF 641


>03_02_0703 - 10535082-10536779
          Length = 565

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 8/134 (5%)
 Frame = +3

Query: 282 STGNSLNESTKVSYV---NERRLQRDFMRSNYTNRPKNIPKETPDVKNMEKALLELLDDF 452
           + GN+ N +     +      R+++    S   N  KN P+ +  +K+ E+ L   +DD 
Sbjct: 66  TAGNATNPTDLAKAIFKATSERIEKAVRESAVLNDLKNDPRTSDALKDCEELLDYAIDDL 125

Query: 453 HT--GKLSAFGSGCSMEQMINIRDQQEHLARLHFRLCADVDKPTEDNFENSAS---RDKM 617
            T   KL  F +      + +++      A  +   C D        FENS S    +KM
Sbjct: 126 KTTFDKLGGFQTSNFKRAVDDVKTWLSS-ALTYQETCLD-------GFENSTSTEASEKM 177

Query: 618 EQLVKSLEQLSNSI 659
            + +KS ++L+ +I
Sbjct: 178 RKALKSSQELTENI 191


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,276,601
Number of Sequences: 37544
Number of extensions: 465853
Number of successful extensions: 1077
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3864364464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)