Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_I08
(1250 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 38 0.020
Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical pr... 33 0.56
U00040-2|AAA50667.4| 366|Caenorhabditis elegans Hypothetical pr... 33 0.56
AL117204-21|CAB55157.1| 712|Caenorhabditis elegans Hypothetical... 31 1.7
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 29 5.2
AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 29 5.2
U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical pr... 29 6.9
EF472000-1|ABQ96385.1| 1142|Caenorhabditis elegans SMG-3 protein. 29 6.9
AC084197-22|AAK68590.2| 1142|Caenorhabditis elegans Suppressor w... 29 6.9
U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cycla... 29 9.1
AF248052-1|AAF62184.1| 280|Caenorhabditis elegans MEI-2 protein. 29 9.1
AF039713-9|AAB96729.1| 280|Caenorhabditis elegans Defective mei... 29 9.1
AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor typ... 29 9.1
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical protein
C50C3.2 protein.
Length = 2107
Score = 37.5 bits (83), Expect = 0.020
Identities = 43/182 (23%), Positives = 70/182 (38%), Gaps = 10/182 (5%)
Frame = +3
Query: 156 MQNEGEDDEQKIPQSATSPVTSXKISSEAASLTSKNH---EKVLTSTGNSLNESTKVSYV 326
+QN E+ E KI Q I+ L S+N K+ + + L +S ++
Sbjct: 664 IQNSVENFEVKIHQKVDDTKKLLHITENMNELNSQNEWIRAKIKSLSAEPLWDSLLIAQK 723
Query: 327 NERRLQRDFMRSNYTNRPKNIPK--ETPDVKNMEKALLELLDDFHTGKLSAFGSGCSMEQ 500
RR DF NR K I + + + LLE+ ++ K G +E+
Sbjct: 724 MRRRHDNDF--EEIANRRKQITEVIQKSATTKDQPILLEIEQNWDRMKDLFDERGGVLER 781
Query: 501 MINIRDQQEHLARL-----HFRLCADVDKPTEDNFENSASRDKMEQLVKSLEQLSNSIER 665
+I + + E + +CAD +P ED N K+E L + +E I
Sbjct: 782 IIKLYEYDEESSTTSEWLREKMICADTIEPKEDESFNEVMVKKLEALTEEVENYKPRIVE 841
Query: 666 LH 671
H
Sbjct: 842 TH 843
>Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical
protein C54G10.2 protein.
Length = 839
Score = 32.7 bits (71), Expect = 0.56
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Frame = +3
Query: 144 TQQLMQNEGEDDEQKIPQSATSPVTSXKISSEAASLTSKNHEKVL-TSTGNSLNESTKVS 320
T+ ++ + +++E+ PQ T+P S K E + +TS E V T K
Sbjct: 35 TKPVVLTDDDEEEENAPQKKTAPKRSRKQEKEESDITSDEDELVRGTDEKKKRKGGKKEL 94
Query: 321 YVNERRLQRDFMRSNYTNRPKNIPKETPDVKNMEKALLELLDDF 452
V ++ L F S+ +++ ++ PK K +EK L+ D F
Sbjct: 95 PVGQKTLDYMFKPSSSSSK-RDDPK-----KKVEKTLVNPADFF 132
>U00040-2|AAA50667.4| 366|Caenorhabditis elegans Hypothetical
protein C18H2.2 protein.
Length = 366
Score = 32.7 bits (71), Expect = 0.56
Identities = 18/73 (24%), Positives = 38/73 (52%)
Frame = +3
Query: 126 LEEANETQQLMQNEGEDDEQKIPQSATSPVTSXKISSEAASLTSKNHEKVLTSTGNSLNE 305
+ E ++++L +E DDE + PQS S + + + +E ++L + +++ S+ S +
Sbjct: 180 ISEYTDSRRLRTSENSDDENEEPQSDYSNIDN--VENENSALVTSKDDELFESSMTSFDT 237
Query: 306 STKVSYVNERRLQ 344
ST +R Q
Sbjct: 238 STHSRSSGRKRTQ 250
>AL117204-21|CAB55157.1| 712|Caenorhabditis elegans Hypothetical
protein Y116A8C.33 protein.
Length = 712
Score = 31.1 bits (67), Expect = 1.7
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Frame = +3
Query: 138 NETQQLMQNEGEDDEQKIPQSATSPVTSXKISSEAASLTSKNHEKVLTSTGNSLNESTKV 317
NE Q++ + DE I QS V S + E K HE + +S +++++
Sbjct: 567 NEMSQMLN---QTDEIGISQSVVQSVYSL-VDLEPLISQVKGHEDI-SSLETAISQAK-- 619
Query: 318 SYVNERRLQRDFMRSNYTNRPKNIPKETPDVK--NMEKAL 431
+Y++ + R YTN KN+ E PD+ +EKAL
Sbjct: 620 AYISRIDVWRAKSLKGYTNPLKNLTAEIPDIDIIPIEKAL 659
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 29.5 bits (63), Expect = 5.2
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +3
Query: 171 EDDEQKIPQS---ATSPVTSXKISSEAASLTSKNHEKVLTSTGNSLNESTKVS 320
EDDE ++ + TS TS S+EA++ T+ TST ++ +T S
Sbjct: 504 EDDEDEVDEEDKEETSTTTSSTTSTEASTPTTSTSTSTSTSTPSTTTSTTSTS 556
>AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical
protein Y54G2A.13 protein.
Length = 610
Score = 29.5 bits (63), Expect = 5.2
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +3
Query: 138 NETQQLMQNEGEDDEQKIPQSATSPVTSXKISSEAASLTSKNHEKVLTSTGNSLNESTKV 317
N T +NE D+ PQSA +PVT+ S + T E L T + ++T+
Sbjct: 259 NPTTSNQKNETTDEATSSPQSAKTPVTNPTTSPQKPDTT----EAALPLTTATTTKATQT 314
Query: 318 SY 323
S+
Sbjct: 315 SH 316
>U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical
protein T26A5.5a protein.
Length = 1076
Score = 29.1 bits (62), Expect = 6.9
Identities = 30/121 (24%), Positives = 48/121 (39%)
Frame = +3
Query: 129 EEANETQQLMQNEGEDDEQKIPQSATSPVTSXKISSEAASLTSKNHEKVLTSTGNSLNES 308
EE + + Q E E+DE + + +PVT S + +KN E S E
Sbjct: 614 EEYDAEEPEDQEEEEEDEYQAEEYTPTPVTRRSSSRRSG---AKNDESEEVSVKKDKKEK 670
Query: 309 TKVSYVNERRLQRDFMRSNYTNRPKNIPKETPDVKNMEKALLELLDDFHTGKLSAFGSGC 488
+ ++++D R N ++ I KE K E+ +EL +A G G
Sbjct: 671 ME-------KVEKDEKRRNSKSKKDKISKEK---KKKERERIELESQLDAELRAAHGGGS 720
Query: 489 S 491
S
Sbjct: 721 S 721
>EF472000-1|ABQ96385.1| 1142|Caenorhabditis elegans SMG-3 protein.
Length = 1142
Score = 29.1 bits (62), Expect = 6.9
Identities = 21/100 (21%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
Frame = +3
Query: 357 RSNYTNRPKNIPKETPDVKNMEKALLELLDDFHTGKLSAFGSGCSMEQMINIRDQQEHLA 536
+SN PKN+ + V +EK L +F G G + +I D+++
Sbjct: 877 KSNSLRWPKNLKEAQDIVTKIEKKFKGELKEFAGEHKDIEGDGLNELNVIEEDDEEDEDE 936
Query: 537 RLHFRLCAD---VDKPTEDNFENSASRDKMEQLVKSLEQL 647
L D D+ +NF N+ ++++ ++ + L+++
Sbjct: 937 NRDSELDEDDSEEDRQKIENFSNAVTKEEDDEFQRELDRM 976
>AC084197-22|AAK68590.2| 1142|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 3 protein.
Length = 1142
Score = 29.1 bits (62), Expect = 6.9
Identities = 21/100 (21%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
Frame = +3
Query: 357 RSNYTNRPKNIPKETPDVKNMEKALLELLDDFHTGKLSAFGSGCSMEQMINIRDQQEHLA 536
+SN PKN+ + V +EK L +F G G + +I D+++
Sbjct: 877 KSNSLRWPKNLKEAQDIVTKIEKKFKGELKEFAGEHKDIEGDGLNELNVIEEDDEEDEDE 936
Query: 537 RLHFRLCAD---VDKPTEDNFENSASRDKMEQLVKSLEQL 647
L D D+ +NF N+ ++++ ++ + L+++
Sbjct: 937 NRDSELDEDDSEEDRQKIENFSNAVTKEEDDEFQRELDRM 976
>U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cyclase
protein 8 protein.
Length = 1206
Score = 28.7 bits (61), Expect = 9.1
Identities = 27/132 (20%), Positives = 58/132 (43%), Gaps = 6/132 (4%)
Frame = +3
Query: 120 LHLEEANETQQLMQNEGEDDEQKIPQSATSPVTSXKISSEAASLTSKNHEKVLTSTGN-- 293
++L ET++++ N G +D + SP T+ S + + + ++ + G+
Sbjct: 16 IYLAACQETERILANNGTEDNEITTSKGVSPNTNPLFLSNSTAGLYDSKGRIRLTIGHIG 75
Query: 294 ---SLNESTKVSYVNERRLQRDFMRSNYTNRPKNIPKETPDVKNMEKALLELLDDFHTGK 464
+L K+ V+ + LQ + + + + I +T ++ E + D +H K
Sbjct: 76 AIGALRNDVKILEVSHKALQAEGILDD--DLDVEIISQTGCGESYE-GVAVAADMYHLQK 132
Query: 465 LSAF-GSGCSME 497
+ AF G C+ E
Sbjct: 133 VKAFIGPYCNAE 144
>AF248052-1|AAF62184.1| 280|Caenorhabditis elegans MEI-2 protein.
Length = 280
Score = 28.7 bits (61), Expect = 9.1
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +3
Query: 120 LHLEEANETQQLMQNEGEDDEQKIPQSATSPVTSXKISSEAASLTSKNHEKV 275
LH E E + + GE+ +P+S SP +S + S ASL S E+V
Sbjct: 72 LHSESKKELSRNPVSRGEEHSSSLPKS--SPESSVSVMSSNASLWSACTEEV 121
>AF039713-9|AAB96729.1| 280|Caenorhabditis elegans Defective
meiosis protein 2 protein.
Length = 280
Score = 28.7 bits (61), Expect = 9.1
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +3
Query: 120 LHLEEANETQQLMQNEGEDDEQKIPQSATSPVTSXKISSEAASLTSKNHEKV 275
LH E E + + GE+ +P+S SP +S + S ASL S E+V
Sbjct: 72 LHSESKKELSRNPVSRGEEHSSSLPKS--SPESSVSVMSSNASLWSACTEEV 121
>AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor type
guanyly cyclase protein.
Length = 1152
Score = 28.7 bits (61), Expect = 9.1
Identities = 27/132 (20%), Positives = 58/132 (43%), Gaps = 6/132 (4%)
Frame = +3
Query: 120 LHLEEANETQQLMQNEGEDDEQKIPQSATSPVTSXKISSEAASLTSKNHEKVLTSTGN-- 293
++L ET++++ N G +D + SP T+ S + + + ++ + G+
Sbjct: 16 IYLAACQETERILANNGTEDNEITTSKGVSPNTNPLFLSNSTAGLYDSKGRIRLTIGHIG 75
Query: 294 ---SLNESTKVSYVNERRLQRDFMRSNYTNRPKNIPKETPDVKNMEKALLELLDDFHTGK 464
+L K+ V+ + LQ + + + + I +T ++ E + D +H K
Sbjct: 76 AIGALRNDVKILEVSHKALQAEGILDD--DLDVEIISQTGCGESYE-GVAVAADMYHLQK 132
Query: 465 LSAF-GSGCSME 497
+ AF G C+ E
Sbjct: 133 VKAFIGPYCNAE 144
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,341,655
Number of Sequences: 27780
Number of extensions: 472247
Number of successful extensions: 1328
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1326
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3474674514
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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