Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_I07
         (1188 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...   279   3e-77
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...   124   1e-30
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    24   1.9  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    24   2.6  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    23   3.4  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   3.4  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   4.5  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score =  279 bits (684), Expect = 3e-77
 Identities = 134/183 (73%), Positives = 147/183 (80%), Gaps = 2/183 (1%)
 Frame = +2

Query: 275 SPPSTMASCMGGAGAVPYGSLPREQEAASPTSALQRARNDKTYRRSYTHAKPPYSYISLI 454
           +P +TM S  G  G +  G L       SP SALQRAR DKTYRRSYTHAKPPYSYISLI
Sbjct: 93  TPMATMNS-YGSVGTLGRGDLGGGD--TSPNSALQRARADKTYRRSYTHAKPPYSYISLI 149

Query: 455 TMAIQNNPSRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPG 634
           TMAIQN+P +MLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPG
Sbjct: 150 TMAIQNSPQKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPG 209

Query: 635 KGSFWTLHPDSGNMFENGCFLRRQKRFKDEKKETLRQAQKAQQTHGHHGGSHDKRG--EH 808
           KGSFW+LHPDSGNMFENGC+LRRQKRFKDEKKE +RQ  K+      +  S +K+   +H
Sbjct: 210 KGSFWSLHPDSGNMFENGCYLRRQKRFKDEKKELIRQTHKSPSHSVDNSNSSEKKSSIQH 269

Query: 809 GHD 817
           G D
Sbjct: 270 GDD 272



 Score = 28.7 bits (61), Expect = 0.090
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = +2

Query: 947  KQXPXGYAPXXXRXXITRLXXGAETKXDXKMXXVXYGYG 1063
            KQ P G+        I RL   AE+K D KM    + YG
Sbjct: 357  KQEPSGFTSSNHPFSINRLLPTAESKADIKMYADMHQYG 395


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score =  124 bits (300), Expect = 1e-30
 Identities = 55/107 (51%), Positives = 76/107 (71%)
 Frame = +2

Query: 392 DKTYRRSYTHAKPPYSYISLITMAIQNNPSRMLTLSEIYQFIMDLFPFYRQNQQRWQNSI 571
           +K      +  KPPYSY +LI MAI+N+P + LTL+ IY++IM  FP+YR+N+Q WQNSI
Sbjct: 72  EKESEEKKSKEKPPYSYNALIMMAIRNSPEKRLTLNGIYEYIMRNFPYYRENKQGWQNSI 131

Query: 572 RHSLSFNDCFVKVPRTPDKPGKGSFWTLHPDSGNMFENGCFLRRQKR 712
           RH+LS N CFVKVPR  D PGKG++W L P + ++F  G   + ++R
Sbjct: 132 RHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGTTGKLRRR 178


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 5/42 (11%)
 Frame = +2

Query: 698 RRQKRFKDEKKETLRQ-----AQKAQQTHGHHGGSHDKRGEH 808
           RR K  K+ +++  +Q     A    Q H HH G H     H
Sbjct: 294 RRMKNKKNSQRQAAQQQNNNNAATNNQNHHHHAGHHIHAQHH 335


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +2

Query: 251 MGSPSVGYSPPSTMASCMGGAG 316
           +GSPS G +PP      MG  G
Sbjct: 271 LGSPSSGPAPPGDFTENMGTLG 292


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 12/46 (26%), Positives = 19/46 (41%)
 Frame = +2

Query: 344 EQEAASPTSALQRARNDKTYRRSYTHAKPPYSYISLITMAIQNNPS 481
           + E     S L+R +    Y  S     PP + ++L     + NPS
Sbjct: 111 QHERGPRNSTLRRQQMSSYYNESRVMMSPPGNVLNLTMPKYEPNPS 156


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 12/46 (26%), Positives = 19/46 (41%)
 Frame = +2

Query: 344 EQEAASPTSALQRARNDKTYRRSYTHAKPPYSYISLITMAIQNNPS 481
           + E     S L+R +    Y  S     PP + ++L     + NPS
Sbjct: 111 QHERGPRNSTLRRQQMSSYYNESRVMMSPPGNVLNLTMPKYEPNPS 156


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 614 RTPDKPGKGSFWTLHPD 664
           RTPD+ G+G  W  + D
Sbjct: 367 RTPDENGEGGAWVGYED 383


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,231
Number of Sequences: 336
Number of extensions: 3929
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 34527696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)