Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_I07
(1188 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc... 98 2e-21
SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1... 93 5e-20
SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizos... 88 3e-18
SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4 |S... 85 2e-17
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 34 0.034
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 29 1.3
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 29 1.7
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 28 2.9
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 5.1
SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces pomb... 27 5.1
SPAC29A4.12c |mug108||sequence orphan|Schizosaccharomyces pombe|... 27 6.8
SPBC660.15 |||mRNA cleavage factor complex subunit |Schizosaccha... 26 8.9
SPAC19B12.11c |||zinc finger protein|Schizosaccharomyces pombe|c... 26 8.9
>SPBC4C3.12 |sep1||fork head transcription factor
Sep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 663
Score = 97.9 bits (233), Expect = 2e-21
Identities = 43/85 (50%), Positives = 55/85 (64%)
Frame = +2
Query: 425 KPPYSYISLITMAIQNNPSRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 604
KPPYSY LI M+I +P R LTLS IY +I + F FY ++ WQNSIRH+LS N F+
Sbjct: 128 KPPYSYAMLIGMSIIRSPDRRLTLSAIYDWISNTFSFYNKSNNGWQNSIRHNLSLNKAFM 187
Query: 605 KVPRTPDKPGKGSFWTLHPDSGNMF 679
K+ R + PGKG FW++ P F
Sbjct: 188 KIERPRNLPGKGHFWSIRPGHEEQF 212
>SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 93.5 bits (222), Expect = 5e-20
Identities = 42/96 (43%), Positives = 61/96 (63%)
Frame = +2
Query: 425 KPPYSYISLITMAIQNNPSRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 604
KP SY +LI + NP++ +TL +I ++I + + +YR W NSIRH+LS N F+
Sbjct: 291 KPNLSYANLIARTLIANPNKKMTLGDICEWIANNWSYYRHQPPAWHNSIRHNLSLNKAFI 350
Query: 605 KVPRTPDKPGKGSFWTLHPDSGNMFENGCFLRRQKR 712
++PR ++PGKGSFW L P + FE G F RR K+
Sbjct: 351 RIPRRQNEPGKGSFWMLDPSYIDQFE-GNFFRRTKK 385
>SPBC16G5.15c |fkh2||fork head transcription factor Fkh2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 87.8 bits (208), Expect = 3e-18
Identities = 39/80 (48%), Positives = 52/80 (65%)
Frame = +2
Query: 425 KPPYSYISLITMAIQNNPSRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 604
KPPYSY +I AI ++ M+TLS IY +I +P+YR + WQNSIRH+LS N F
Sbjct: 223 KPPYSYSVMIAQAILSSSECMMTLSNIYSWISTHYPYYRTTKSGWQNSIRHNLSLNKAFR 282
Query: 605 KVPRTPDKPGKGSFWTLHPD 664
KVPR + GKG W++ P+
Sbjct: 283 KVPRKSGEQGKGMKWSIVPE 302
>SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 517
Score = 85.0 bits (201), Expect = 2e-17
Identities = 43/105 (40%), Positives = 59/105 (56%)
Frame = +2
Query: 416 THAKPPYSYISLITMAIQNNPSRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFND 595
T KPP SY +LI +AI + ++ LTLS IY +I + F +Y + WQNSIRH+LS N
Sbjct: 78 TGEKPPCSYATLIGLAILQSHNKQLTLSGIYTWIRNTFRYYLNHDGGWQNSIRHNLSLNK 137
Query: 596 CFVKVPRTPDKPGKGSFWTLHPDSGNMFENGCFLRRQKRFKDEKK 730
F+KV + K KG +WT+ PD F + R + KK
Sbjct: 138 AFIKVEKPKGKTLKGHYWTIDPDHMQNFVSVRLHRSHSTDSNSKK 182
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 34.3 bits (75), Expect = 0.034
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +2
Query: 356 ASPTSALQRARNDKTYRRSYTHAKPPYSYISLITMAIQNNPSRMLTLSEIYQFIMDLFPF 535
++PT + +R + + T+ KPP S S+ T+ IQ N S+ +T + QF +
Sbjct: 19 STPTPSARRTIGPRAPKSKTTYHKPPSSIESVSTL-IQPNKSQSVTSPYVKQFTFSSKEY 77
Query: 536 YRQNQQRWQNS 568
N+ QNS
Sbjct: 78 NSHNKHALQNS 88
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 29.1 bits (62), Expect = 1.3
Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Frame = +2
Query: 197 AQPYPNLYSNNMVAGGSCMGSPSVGYSPPSTMASCMGGAGA-VPYGSLPREQEAASPTSA 373
A P YS VAG S +PS GY T + A A P + P P +A
Sbjct: 318 ATDIPPPYSTPSVAGASDYSTPSAGYQTVQTTTTTTEAAAAQYPQAAFPPPPVMPQPAAA 377
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 28.7 bits (61), Expect = 1.7
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Frame = +2
Query: 314 GAVPYGSLPREQEAASPTSALQRARNDK---TYRRSYTHAKPPYSYISLITMAIQNNPSR 484
GAVP +LP++Q++ Q+ + Y + PYS L NPSR
Sbjct: 387 GAVPSSTLPQQQKSLDKPKPAQQPSTGQFSGNQMNQYGFSNSPYSQNMLYNFNGNANPSR 446
Query: 485 MLTLSEIYQFIMDLFPFYRQNQQR 556
+ + Y + L +QN++R
Sbjct: 447 LNPALKNYMEELKLLE--QQNKKR 468
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 27.9 bits (59), Expect = 2.9
Identities = 19/76 (25%), Positives = 31/76 (40%)
Frame = +2
Query: 203 PYPNLYSNNMVAGGSCMGSPSVGYSPPSTMASCMGGAGAVPYGSLPREQEAASPTSALQR 382
P P+L N V G M +P++ PST S G ++P + + P SA +
Sbjct: 219 PNPSLPLNPSVLQGQVMNNPTIPKGTPST--SIEGAKTSIPPSHAMQNPHNSFPASADRL 276
Query: 383 ARNDKTYRRSYTHAKP 430
+N ++ P
Sbjct: 277 QKNHPVQSSNFNPYTP 292
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.1 bits (57), Expect = 5.1
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = -1
Query: 324 GTAPAPPMQEAMVLGGE*PTLGEPIHEPPATMLLEYRFG*GCAGMQPIPLT*GGARPGDS 145
G P PP EA + P++G P PP+T AG+ P+P+ A P +
Sbjct: 1187 GVPPVPPPSEAPPVPK--PSVGVPPVPPPSTAPPVPT---PSAGLPPVPVPTAKAPPVPA 1241
Query: 144 EDSDADVGTSPYES 103
S+A ++P S
Sbjct: 1242 PSSEAPSVSTPRSS 1255
>SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 420
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = +2
Query: 743 QAQKAQQTHGHHGGSHDKRGEHGHDKSAPXGPGEDKE 853
++ K GHH H H HD P P E K+
Sbjct: 289 ESDKDLHHEGHHHHHHHHHHHHSHDDD-PSSPAEKKQ 324
>SPAC29A4.12c |mug108||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 26.6 bits (56), Expect = 6.8
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +2
Query: 746 AQKAQQTHGHHGGSHDKRGEHGH 814
+ + Q+THGHH H G H
Sbjct: 8 SDQTQETHGHHVDKHSFSGRQRH 30
>SPBC660.15 |||mRNA cleavage factor complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 26.2 bits (55), Expect = 8.9
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +1
Query: 484 HADALRNLPVHHGSVPFLQ-TKPAALAE 564
+ +A+RN+P G+VP+ Q PA +A+
Sbjct: 372 YMEAMRNMPAAAGAVPYPQPVMPAGMAD 399
>SPAC19B12.11c |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 124
Score = 26.2 bits (55), Expect = 8.9
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 563 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHPDSGNMFENGCFLRRQKRFKDEKK--ET 736
+ I + L+ ++ F K+P PD PG G + + + F++ L K+ K K+ +
Sbjct: 29 DQIHNDLTESEKFDKLPIDPDLPGLGQHYCI--ECARYFDSSQALLVHKKGKVHKRRLKN 86
Query: 737 LRQAQKAQQ 763
LR+ Q+
Sbjct: 87 LREEPYTQE 95
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,379,354
Number of Sequences: 5004
Number of extensions: 58256
Number of successful extensions: 202
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 201
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 639490422
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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