Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_I07
(1188 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0073 - 8020401-8020512,8020594-8020679,8020761-8020921,802... 33 0.44
02_05_0814 - 31970558-31971126,31971242-31971413 32 0.77
09_03_0166 + 12956794-12956832,12956936-12956977,12957084-129571... 31 1.3
12_01_0292 + 2193309-2193338,2193565-2193640,2193744-2195203,219... 31 1.8
07_03_1194 - 24708281-24708796,24708990-24708996,24709199-24709866 31 2.3
12_01_0357 + 2720860-2721066,2721169-2721384,2721481-2723608,272... 30 3.1
04_03_0742 + 19200045-19200053,19200158-19200437,19201331-192015... 30 4.1
01_05_0696 - 24366857-24368200 30 4.1
10_08_0010 - 14078740-14079270 29 5.4
10_01_0126 + 1511963-1512052,1513440-1513785,1513884-1515010 29 5.4
08_02_1386 + 26646156-26646407,26646506-26646612,26646921-266470... 29 7.2
06_01_0068 - 572964-573323 29 7.2
04_03_0671 + 18549252-18549514,18550286-18550354,18550724-185508... 29 7.2
02_02_0593 + 11964580-11964831,11964930-11965036,11965345-119654... 29 7.2
01_01_0316 + 2565704-2566134,2566682-2566845,2566989-2567152,256... 29 7.2
12_02_1243 + 27300978-27301682 29 9.5
11_06_0562 + 25003246-25003746,25004975-25005214,25005576-250060... 29 9.5
11_01_0367 + 2797475-2798062 29 9.5
07_03_1447 + 26587436-26587497,26588479-26589130,26589247-265893... 29 9.5
>11_02_0073 -
8020401-8020512,8020594-8020679,8020761-8020921,
8021196-8021400,8021664-8021697,8022352-8022422,
8023363-8023542,8023625-8023765,8023859-8023975,
8024074-8024469
Length = 500
Score = 33.1 bits (72), Expect = 0.44
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = +2
Query: 680 ENGCFLRRQKRFKDEKKETLRQAQKAQQTHGHHGGSHDKRGEHGHDKSA---PXGPGEDK 850
E+G RR++ DE + + HG G + + G H DK+A GP +D
Sbjct: 29 EDGYRRRRRREDSDEPDDDEEDPEVEGDGHGDAGTAAGEGGAHEMDKAAGGGGDGPEDDD 88
Query: 851 EMR--DELLA 874
E R DELLA
Sbjct: 89 EKRKWDELLA 98
>02_05_0814 - 31970558-31971126,31971242-31971413
Length = 246
Score = 32.3 bits (70), Expect = 0.77
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 194 PAQPYPNLYSNNMVAGGSCMGSPSVGYSPPSTMASCMGGAGAVP 325
P PYP+ + M +P+ Y+ P++ A C GGAGA P
Sbjct: 162 PTTPYPSTPMPTTPYPSTPMTTPTTPYTTPTSPA-CSGGAGATP 204
>09_03_0166 +
12956794-12956832,12956936-12956977,12957084-12957149,
12957237-12957350,12957435-12957515,12957613-12957690,
12958702-12958784,12959645-12959726,12959801-12959901,
12960016-12960055,12960162-12960221,12960302-12960348,
12960437-12960575,12960716-12960931,12961010-12961344,
12961525-12961596,12962449-12962589,12962680-12962716,
12962837-12963256
Length = 730
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 692 FLRRQKRFKDEKKETL-RQAQKAQQTHGHHGGSHDKRGEHGHDKSAPXGPG 841
F RQ+++K+E + L R+ K HGHHG + G S+ GPG
Sbjct: 511 FAERQRKWKEELVQELERERGKTGHVHGHHGVTKSS----GVTSSSRSGPG 557
>12_01_0292 +
2193309-2193338,2193565-2193640,2193744-2195203,
2195479-2195505,2195794-2196024,2196523-2196692,
2197278-2197421,2198036-2198083,2198503-2198566
Length = 749
Score = 31.1 bits (67), Expect = 1.8
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +2
Query: 740 RQAQKAQQTHGHHGGSHDKRGEHGH-DKSAPXG 835
+Q Q HGHHG H G HGH +AP G
Sbjct: 449 QQQQMMMNGHGHHGHGH-HHGHHGHGGGAAPAG 480
>07_03_1194 - 24708281-24708796,24708990-24708996,24709199-24709866
Length = 396
Score = 30.7 bits (66), Expect = 2.3
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 209 PNLYSNNMVAGGSCMGSPSVGYSPPSTMASCMGGAGAVPYGSL---PREQEAASPT 367
PNL + M GG G P V +PP +S GG+G +GSL E++ ASP+
Sbjct: 148 PNLPAV-MGGGGGIPGIPQVPVAPPEVASSSGGGSGW--FGSLFGKKEEEKKASPS 200
>12_01_0357 +
2720860-2721066,2721169-2721384,2721481-2723608,
2723699-2724124,2724242-2724546,2724660-2724823,
2724899-2724980
Length = 1175
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 221 SNNMVAGGSCMGSPSVGYSPPSTMASCMGGAGAVPY 328
SN++V GGS +P Y P S + M G +PY
Sbjct: 737 SNDLVKGGSLQQAPQHPYGPDSMLPQHMRQPGHMPY 772
>04_03_0742 +
19200045-19200053,19200158-19200437,19201331-19201545,
19201705-19201792,19202277-19202842
Length = 385
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 719 DEKKETLRQAQKAQQTHGHHGGSHDKRGEHGHDKSAPXGPGEDKEMRDE 865
DEKK+ ++ +K + G +GG +K+ E +K GE+K+ E
Sbjct: 263 DEKKDE-KEEKKDGKEEGGNGGGDEKKEEKEKEKEGGNADGEEKDKDKE 310
>01_05_0696 - 24366857-24368200
Length = 447
Score = 29.9 bits (64), Expect = 4.1
Identities = 23/51 (45%), Positives = 27/51 (52%)
Frame = +2
Query: 179 GMGCMPAQPYPNLYSNNMVAGGSCMGSPSVGYSPPSTMASCMGGAGAVPYG 331
G G PY NL S+ M GG+ +GS +G PS M GGAGA YG
Sbjct: 318 GAGLGGPNPYANLPSS-MGGGGAGLGS--LGNQMPSGM----GGAGAGAYG 361
>10_08_0010 - 14078740-14079270
Length = 176
Score = 29.5 bits (63), Expect = 5.4
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +2
Query: 239 GGSCMGSPSVGYSPPSTMASCMGGAGAVPYGSLPREQEAASPTSALQRARNDKTYRRSYT 418
GG G G++P ++ C+GGA GS P AA+ QR RS+
Sbjct: 21 GGMVRGDDEGGWAPLASSERCIGGATDAEEGS-PAPAMAAAAAQPPQRRLPAHRLYRSHP 79
Query: 419 H 421
H
Sbjct: 80 H 80
>10_01_0126 + 1511963-1512052,1513440-1513785,1513884-1515010
Length = 520
Score = 29.5 bits (63), Expect = 5.4
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 704 QKRFKDEKKETLRQAQKAQQTHGHHGGSHDKRGEHGHDKSAPXG 835
QK+ K E+K+ R+ +KA Q G + D +HGH K G
Sbjct: 39 QKKEKKERKKEKRRQKKAAQL-GEKYETDDHHSKHGHKKRKHSG 81
>08_02_1386 +
26646156-26646407,26646506-26646612,26646921-26647053,
26647162-26647356,26647906-26648259
Length = 346
Score = 29.1 bits (62), Expect = 7.2
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 156 PGDSEDSDADVGTSPYESFCE 94
P S D+DAD G +E+FC+
Sbjct: 287 PATSPDADADAGAESWEAFCQ 307
>06_01_0068 - 572964-573323
Length = 119
Score = 29.1 bits (62), Expect = 7.2
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = +2
Query: 698 RRQKRFKDEKKETLRQAQKAQQTHGHHGGSH----DKRGEHGHDKSAPXGPGEDKEMRDE 865
RRQ+ + + E L + +Q HH G H +R +HG + G G + DE
Sbjct: 16 RRQREERQLRDEPLHLRRVLRQRGTHHDGKHRRSRGRRRQHGGEGRRAPGGGVAAHVADE 75
Query: 866 LL 871
++
Sbjct: 76 VV 77
>04_03_0671 +
18549252-18549514,18550286-18550354,18550724-18550862,
18550993-18551008,18551773-18551821,18552163-18552218,
18552680-18552752,18552838-18552922,18553098-18553130,
18553400-18553481,18553525-18553610,18554050-18554058,
18554522-18554581
Length = 339
Score = 29.1 bits (62), Expect = 7.2
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Frame = +2
Query: 341 REQEAASPTSALQRARNDKT----YRRSYTHAKPPYSYISLITMAIQN 472
REQE A+ TSAL AR D T RRS + P Y +S+ + +N
Sbjct: 62 REQENAAATSALLAARGDGTDKEGRRRSSSSFIPMYFVLSIASAGKKN 109
>02_02_0593 +
11964580-11964831,11964930-11965036,11965345-11965477,
11965586-11965780,11966330-11966683
Length = 346
Score = 29.1 bits (62), Expect = 7.2
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 156 PGDSEDSDADVGTSPYESFCE 94
P S D+DAD G +E+FC+
Sbjct: 287 PATSPDADADAGAESWEAFCQ 307
>01_01_0316 +
2565704-2566134,2566682-2566845,2566989-2567152,
2567594-2567720,2568347-2568450
Length = 329
Score = 29.1 bits (62), Expect = 7.2
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 740 RQAQKAQQTHGHHGGSHDKRGEHGHDKSAPXGP 838
++ KA + HG HG H G H H +S P P
Sbjct: 26 QERPKAPRRHGSHGPGH--YGNHHHHRSRPPPP 56
>12_02_1243 + 27300978-27301682
Length = 234
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +2
Query: 767 HGH-HGGSHDKRGEHGHDKSAP-XGPGEDKEMRDELL 871
HGH HG H G H H +AP GP ++ D L
Sbjct: 180 HGHGHGHGHAFHGGHAHAAAAPRHGPPGQQQQADVYL 216
>11_06_0562 +
25003246-25003746,25004975-25005214,25005576-25006097,
25006184-25007248,25007350-25007656,25007761-25008001,
25008104-25008302,25008771-25008852,25008959-25009209,
25010061-25010219,25010220-25010603
Length = 1316
Score = 28.7 bits (61), Expect = 9.5
Identities = 21/48 (43%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 239 GGSCMGSP-SVGYSPPSTMASCMGGAGAVP--YGSLPREQEAASPTSA 373
GG+ GSP S SPP+T A GG G V GS P E A A
Sbjct: 50 GGADGGSPASRAASPPTTAAGGQGGGGPVSGGGGSAPGGAETAQRQGA 97
>11_01_0367 + 2797475-2798062
Length = 195
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -2
Query: 770 RASAAPSGPVSMSLSSRP*IVSDVARNNRFRTCSRCQDVASKRNLFRACP 621
RA++ PS P+ SL + V + S C D+AS RNLF P
Sbjct: 11 RAASLPSLPLVASLHAAALRRGAVLAPSLIHAYSACGDLASARNLFDELP 60
>07_03_1447 +
26587436-26587497,26588479-26589130,26589247-26589335,
26589794-26589858,26589967-26590022,26590107-26590227,
26590316-26590390,26590689-26590742,26590830-26590924,
26591004-26591178,26591293-26591537
Length = 562
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 466 PE*SFTHADALRNLPVHHGSVPFLQTKPAALAELDPTFAVLQRL 597
P+ +F+ A+ HGSV + + A L+ LDPT ++L +L
Sbjct: 85 PKINFSKVVAISGSGQQHGSVYWKKGSHAVLSSLDPTKSLLSQL 128
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,946,667
Number of Sequences: 37544
Number of extensions: 532987
Number of successful extensions: 2110
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2095
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3619931772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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