Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_I05
(1227 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88; ... 93 2e-17
UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44; Fungi... 93 2e-17
UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79; Eukary... 91 4e-17
UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genom... 85 4e-15
UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1; ... 55 3e-06
UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiell... 51 5e-05
UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=... 50 2e-04
UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba h... 44 0.008
UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1; ... 37 0.92
UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1; ... 36 1.6
UniRef50_Q9HIX1 Cluster: 50S ribosomal protein L44E; n=5; Archae... 36 1.6
UniRef50_UPI0000E45C85 Cluster: PREDICTED: hypothetical protein;... 34 6.5
UniRef50_Q9YF00 Cluster: 50S ribosomal protein L44E; n=15; Therm... 34 6.5
>UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88;
Eukaryota|Rep: 60S ribosomal protein L36a-like - Homo
sapiens (Human)
Length = 106
Score = 92.7 bits (220), Expect = 2e-17
Identities = 43/67 (64%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Frame = +1
Query: 214 RYXRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CKVXSQVALKRCKHFELGGDKKR 387
RY RKQ GYGGQ+KPIF IVLRLEC + C+ +A+KRCKHFELGGDKKR
Sbjct: 40 RYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKR 99
Query: 388 KGQMIQF 408
KGQ+IQF
Sbjct: 100 KGQVIQF 106
Score = 47.2 bits (107), Expect = 9e-04
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = +3
Query: 96 LVXVPKQRRPSCKXCQCHKVHKVSQYKKSKERHAAQG 206
+V VPK RR CK C H+ HKV+QYKK K+ AQG
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36a -
Homo sapiens (Human)
Length = 106
Score = 92.7 bits (220), Expect = 2e-17
Identities = 43/67 (64%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Frame = +1
Query: 214 RYXRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CKVXSQVALKRCKHFELGGDKKR 387
RY RKQ GYGGQ+KPIF IVLRLEC + C+ +A+KRCKHFELGGDKKR
Sbjct: 40 RYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKR 99
Query: 388 KGQMIQF 408
KGQ+IQF
Sbjct: 100 KGQVIQF 106
Score = 47.2 bits (107), Expect = 9e-04
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = +3
Query: 96 LVXVPKQRRPSCKXCQCHKVHKVSQYKKSKERHAAQG 206
+V VPK RR CK C H+ HKV+QYKK K+ AQG
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79;
Eukaryota|Rep: 60S ribosomal protein L44 -
Caenorhabditis elegans
Length = 105
Score = 91.5 bits (217), Expect = 4e-17
Identities = 40/78 (51%), Positives = 51/78 (65%)
Frame = +1
Query: 175 KSPRKGTLPRXXSRYXRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVXSQVALKRC 354
K ++ + RY RKQ G+GGQ+KPIF IVLR+EC +CK Q+ +KRC
Sbjct: 28 KKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKKAKTTKKIVLRMECTECKHKKQLPIKRC 87
Query: 355 KHFELGGDKKRKGQMIQF 408
KHFELGG KK +GQ+IQF
Sbjct: 88 KHFELGGQKKSRGQVIQF 105
Score = 42.3 bits (95), Expect = 0.025
Identities = 21/38 (55%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3
Query: 96 LVXVPKQRRPSCKX-CQCHKVHKVSQYKKSKERHAAQG 206
+V VPK RR C C+ H HKV+QYKK KE AQG
Sbjct: 1 MVNVPKARRTFCDGKCRKHTNHKVTQYKKGKESKFAQG 38
>UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genome
shotgun sequence; n=9; Eukaryota|Rep: Chromosome chr1
scaffold_5, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 151
Score = 85.0 bits (201), Expect = 4e-15
Identities = 44/113 (38%), Positives = 59/113 (52%)
Frame = +1
Query: 55 FAVLLLSLPHALKNWCXSQNSAGRPAKXVNATKSTRSHSTKSPRKGTLPRXXSRYXRKQQ 234
F ++ +++P K +C S+ V K + ++ RY RKQ
Sbjct: 43 FLLVKVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKR--------RYDRKQS 94
Query: 235 GYGGQSKPIFXXXXXXXXXIVLRLECADCKVXSQVALKRCKHFELGGDKKRKG 393
GYGGQ+KP+F IVLRL+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 95 GYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 147
>UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 89
Score = 55.2 bits (127), Expect = 3e-06
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +1
Query: 292 IVLRLECADCKVXSQVALKRCKHFELGGDKKRKG 393
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 52 IVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 85
>UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiella
natans|Rep: Ribosomal protein L44 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 99
Score = 51.2 bits (117), Expect = 5e-05
Identities = 25/70 (35%), Positives = 36/70 (51%)
Frame = +1
Query: 160 RSHSTKSPRKGTLPRXXSRYXRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVXSQV 339
+S+ K + + RY RKQQGYGGQ+KP+F ++L C CK
Sbjct: 22 KSYEYKPGKASLNAQGKRRYDRKQQGYGGQTKPVFRKQVKNTKKPSIKLSCEICKKEFIK 81
Query: 340 ALKRCKHFEL 369
+LKR K F++
Sbjct: 82 SLKRTKRFQI 91
>UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=1;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L44,
putative - Trichomonas vaginalis G3
Length = 104
Score = 49.6 bits (113), Expect = 2e-04
Identities = 24/59 (40%), Positives = 31/59 (52%)
Frame = +1
Query: 214 RYXRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVXSQVALKRCKHFELGGDKKRK 390
RY RKQ+G+GG+ KPI I LR C CK + L R + FE +KK+K
Sbjct: 40 RYDRKQKGFGGRVKPILRRSKKTSKKISLRFTCQSCKKATMYCLGRLRKFEWTVEKKKK 98
Score = 37.1 bits (82), Expect = 0.92
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 96 LVXVPKQRRPSCKXCQCHKVHKVSQYKKSKERHAAQG 206
+V PK ++ CK C+ H + KVSQ + +ERH+A G
Sbjct: 1 MVHHPKTKKFFCKFCKKHTMCKVSQASRGEERHSALG 37
>UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba
histolytica|Rep: Ribosomal protein L44 - Entamoeba
histolytica
Length = 80
Score = 44.0 bits (99), Expect = 0.008
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +1
Query: 214 RYXRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVXSQVALKRC 354
RY RKQQG+GGQ+KP+F + ++EC CK+ + C
Sbjct: 24 RYDRKQQGFGGQTKPVFKKKAKQQRRL-FKIECTKCKIAQSLRESTC 69
>UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 147
Score = 37.1 bits (82), Expect = 0.92
Identities = 25/49 (51%), Positives = 28/49 (57%)
Frame = +2
Query: 236 VTVVSPNPSSKXRQKPLXKLCSVLSVQIAR*XHRLH*RDASTLSSVVTR 382
VTVV P+ SS R +P +L SV S AR DAST SSVVTR
Sbjct: 54 VTVVRPSLSSTRRLRPPRRLSSVSSALSARPSTNSPSSDASTSSSVVTR 102
>UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 76
Score = 36.3 bits (80), Expect = 1.6
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +1
Query: 340 ALKRCKHFELGGDKKRKG 393
+++RCKHFE+GGDKK KG
Sbjct: 55 SVQRCKHFEIGGDKKGKG 72
>UniRef50_Q9HIX1 Cluster: 50S ribosomal protein L44E; n=5;
Archaea|Rep: 50S ribosomal protein L44E - Thermoplasma
acidophilum
Length = 93
Score = 36.3 bits (80), Expect = 1.6
Identities = 25/76 (32%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
Frame = +1
Query: 151 KSTRSHSTKSPRK---GTLPRXXSRYXRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADC 321
K SHS + RK L R+ R GYGG +P F I LRL C +C
Sbjct: 15 KKHTSHSVERVRKRKASELKAGQRRFRRVTSGYGGFPRPKFEGREKPTKRIALRLVCDEC 74
Query: 322 KVXSQVALKRCKHFEL 369
R K FE+
Sbjct: 75 HKAITPPGIRAKKFEI 90
>UniRef50_UPI0000E45C85 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 375
Score = 34.3 bits (75), Expect = 6.5
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +1
Query: 49 LFFAVLLLSLPHALKNWCXSQNSAG---RPAKXVNATKST-RSHSTKSPRKGTLPRXXSR 216
+ F V+++S+ HAL WC N + R A A K+T ++ ST S + + P
Sbjct: 25 IIFVVIVISITHALYTWCTKGNKSSKTTRSASSTGAPKATPKASSTASSPQASAPPEPPA 84
Query: 217 Y 219
Y
Sbjct: 85 Y 85
>UniRef50_Q9YF00 Cluster: 50S ribosomal protein L44E; n=15;
Thermoprotei|Rep: 50S ribosomal protein L44E - Aeropyrum
pernix
Length = 95
Score = 34.3 bits (75), Expect = 6.5
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 108 PKQRRPSCKXCQCHKVHKVSQYKKSKERHAAQG 206
PK+ R C C H H+V+QY+ K R A G
Sbjct: 4 PKRIRTYCPRCNTHTEHRVAQYRAGKRRAMALG 36
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 463,497,463
Number of Sequences: 1657284
Number of extensions: 7132328
Number of successful extensions: 17759
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17703
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 123505711495
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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