Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_I03
         (1180 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.4  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   7.8  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 412  ASNDRGIDVVRNKIKMFAQQKVTLPPGR 495
            +SN+  I   R K   + QQ++++ P R
Sbjct: 1405 SSNNPSISAFRKKSLAYVQQRMSIAPNR 1432


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 412  ASNDRGIDVVRNKIKMFAQQKVTLPPGR 495
            +SN+  I   R K   + QQ++++ P R
Sbjct: 1405 SSNNPSISAFRKKSLAYVQQRMSIAPNR 1432


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3

Query: 761 KTTALTPSSVYDR 723
           K  A+TPSS+YD+
Sbjct: 14  KFFAITPSSIYDK 26


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,650
Number of Sequences: 336
Number of extensions: 4699
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 34434398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)