Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_I03
(1180 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0840 + 28570642-28570809,28570919-28571025,28571137-285712... 320 2e-87
12_01_0489 + 3872495-3872538,3872663-3872741,3872835-3872914,387... 184 1e-46
02_05_0922 - 32742863-32742958,32743081-32743136,32743253-327433... 157 2e-38
03_06_0267 - 32751431-32751489,32751600-32751645,32751886-327519... 71 2e-17
12_01_0671 - 5702051-5702159,5702493-5703216,5703910-5704476,570... 61 2e-09
11_06_0143 + 20589574-20589684,20590256-20590873,20590943-205910... 59 6e-09
11_02_0042 - 7672565-7672729,7672902-7672977,7673409-7674132,767... 59 6e-09
03_02_0466 - 8690469-8690522,8691008-8691113,8691216-8691457,869... 45 1e-04
06_01_0400 + 2862684-2862872,2862956-2863170,2863298-2863448,286... 38 0.020
02_02_0522 - 11161385-11161537,11162513-11162668,11164176-111642... 36 0.062
12_01_0668 - 5682664-5682916,5684542-5684576,5684643-5684693,568... 36 0.082
02_05_0449 - 29107310-29107377,29107732-29107777,29107860-291079... 36 0.082
07_03_0057 + 12872946-12873152,12873371-12873421,12876335-128764... 33 0.44
06_03_1497 + 30585074-30586327 31 1.3
05_06_0104 - 25603568-25603867,25603965-25604162,25604247-256045... 31 1.3
04_04_1553 - 34363848-34366058,34369087-34370451 31 1.8
03_05_0169 + 21474655-21474771,21474879-21474971,21475553-214756... 31 1.8
05_07_0274 - 28873531-28873644,28873727-28873981,28874111-288741... 31 2.3
05_06_0196 + 26293889-26294122,26294317-26294375,26294454-262945... 31 2.3
03_02_0326 + 7474352-7474448,7474913-7474977,7475105-7475191,747... 31 2.3
07_03_1756 - 29239137-29239325,29239741-29240259,29240693-292408... 30 3.1
03_03_0186 + 15243150-15243563,15243685-15243777,15244604-152446... 30 3.1
02_05_0693 - 30977323-30977421,30977783-30977843,30978874-309789... 30 3.1
01_05_0749 + 24890944-24891146,24891414-24891535,24891633-248917... 30 3.1
02_04_0114 + 19879468-19880671,19882007-19882179,19882265-198826... 30 4.1
11_06_0346 - 22549699-22549721,22549857-22549999,22550100-225521... 29 5.4
09_06_0067 - 20645012-20645095,20645365-20645466,20645583-206458... 29 5.4
09_02_0499 - 9917891-9918148,9918240-9918494,9918769-9918940,991... 29 5.4
09_02_0188 - 5540598-5541116 29 5.4
07_01_0629 - 4695778-4696077,4696242-4696406,4696497-4696673,469... 29 5.4
06_01_0065 + 549972-550770,551577-552190,552392-552544,552769-55... 29 5.4
06_01_0042 + 410061-410544,411401-411837 29 5.4
05_04_0102 + 18013994-18014049,18014236-18014335,18014499-180147... 29 5.4
05_03_0157 - 9027777-9027862,9028142-9029357 29 5.4
04_04_0394 + 24905501-24905673,24907824-24907868,24908412-249085... 29 5.4
02_04_0067 - 19425019-19425288,19425393-19425647,19425766-194259... 29 5.4
08_02_0657 - 19749835-19751942,19753123-19753561 29 7.1
08_02_0520 - 18121561-18121821,18122216-18122470,18122560-181227... 29 7.1
04_04_0171 - 23282840-23283036,23283360-23283660,23283747-232840... 29 7.1
03_04_0140 + 17638335-17638583,17638843-17639061,17639206-176394... 29 7.1
03_02_0741 - 10857656-10857844,10858315-10858848,10859516-108598... 29 7.1
02_03_0314 - 17600970-17600974,17601230-17601357,17601832-176019... 29 7.1
02_02_0035 - 6253446-6255473 29 7.1
01_05_0662 - 24103475-24103735,24103831-24104085,24104280-241044... 29 7.1
01_05_0660 - 24071523-24071780,24071873-24072127,24072209-240723... 29 7.1
01_05_0659 - 24061318-24061575,24061664-24061918,24062001-240621... 29 7.1
01_03_0179 + 13500413-13500768,13502522-13502642,13502876-135029... 29 7.1
12_02_1267 - 27448871-27450445 29 9.4
06_01_0369 + 2651192-2651862,2652103-2652158,2652816-2652874,265... 29 9.4
04_04_0251 + 23930789-23930960,23931065-23931128,23931641-239317... 29 9.4
04_03_0687 + 18713603-18713962,18715318-18715539,18717068-187172... 29 9.4
02_02_0543 + 11360514-11361350,11361434-11361559,11361648-113619... 29 9.4
02_01_0611 - 4567839-4568144,4568280-4569209,4569301-4569566,456... 29 9.4
>04_04_0840 +
28570642-28570809,28570919-28571025,28571137-28571238,
28571786-28571981,28572691-28572819,28572869-28572895,
28572896-28573090,28573182-28573292
Length = 344
Score = 320 bits (785), Expect = 2e-87
Identities = 155/269 (57%), Positives = 199/269 (73%), Gaps = 9/269 (3%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAV 399
RP + GN V+RL A+ GN PN+I++GPPG GKTT+IL LA LLG S+++AV
Sbjct: 24 RPTRVADVGGNSDAVARLQDIARDGNMPNLILSGPPGTGKTTSILSLAHELLGPSYREAV 83
Query: 400 LELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMELYS 579
LELNAS+DRG+DVVRNKIKMFAQ+KVTL PGRHKIVILDEADSMT GAQQALRRTME+YS
Sbjct: 84 LELNASDDRGLDVVRNKIKMFAQKKVTLQPGRHKIVILDEADSMTSGAQQALRRTMEIYS 143
Query: 580 STTRFALAANNSEKIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVV 759
+TTRFALA N S KIIEPIQSRCA++R+SRLSD +IL +++ + E + Y EG+ A++
Sbjct: 144 NTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMIVVAAEKVPYVPEGLEAII 203
Query: 760 FTAQGDLRSALNNLQSTAQGFGHISPDNVFK---------VCDEPHPMVVRQMLEAXTKQ 912
FTA GD+R ALNNLQ+T GF ++ +NVFK VCD+PHP+ V+ M++
Sbjct: 204 FTADGDMRQALNNLQATVSGFRFVNQENVFKLIVMLYWLQVCDQPHPLHVKNMVKNVLDG 263
Query: 913 DIHEAYKVIAKLCKIGYAAEDIVSNIFRV 999
EA + +L +GY+ DI++ +FRV
Sbjct: 264 KFDEACSALKQLYDLGYSPTDIITTLFRV 292
>12_01_0489 +
3872495-3872538,3872663-3872741,3872835-3872914,
3873888-3874007,3874090-3874159,3874238-3874311,
3874393-3874513,3874600-3874662,3874748-3874807,
3875156-3875281,3875358-3875441,3875912-3876010
Length = 339
Score = 184 bits (448), Expect = 1e-46
Identities = 108/268 (40%), Positives = 149/268 (55%), Gaps = 8/268 (2%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVS-FKDA 396
RP+ + E V L +T + P+++ GPPG GKTTT L +A L G +K
Sbjct: 16 RPRQVKDVAHQEEVVRVLTTTLQTADLPHMLFYGPPGTGKTTTALAIAYQLYGPELYKSR 75
Query: 397 VLELNASNDRGIDVVRNKIKMFAQ------QKVTLPPGRHKIVILDEADSMTDGAQQALR 558
VLELNAS+DRGI+VVR KIK FA +K P +KI+ILDEADSMT+ AQ ALR
Sbjct: 76 VLELNASDDRGINVVRTKIKDFAAVAVGSARKGGYPCPPYKIIILDEADSMTEDAQNALR 135
Query: 559 RTMELYSSTTRFALAANNSEKIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTE 738
RTME YS TRF N +IIEP+ SRCA R+ LS+ + +++ ICN+E LS
Sbjct: 136 RTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNEEGLSLDA 195
Query: 739 EGVSAVVFTAQGDLRSALNNLQSTAQGFG-HISPDNVFKVCDEPHPMVVRQMLEAXTKQD 915
+ ++ + + GDLR A+ LQS A+ FG IS ++ V VV+ +L + +
Sbjct: 196 QALATLSTISNGDLRRAITYLQSAARLFGSSISSTDLISVSGAIPEDVVKSLLASCKSGE 255
Query: 916 IHEAYKVIAKLCKIGYAAEDIVSNIFRV 999
A K + + GY ++S V
Sbjct: 256 FDVANKEVNNIIADGYPVSQLISQFLDV 283
>02_05_0922 -
32742863-32742958,32743081-32743136,32743253-32743382,
32743768-32743849,32744038-32744227,32744290-32744369,
32744769-32744985,32745740-32745923
Length = 344
Score = 157 bits (380), Expect = 2e-38
Identities = 95/268 (35%), Positives = 146/268 (54%), Gaps = 14/268 (5%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAV 399
RPQ+ + + V + P++++ GPPG GKT+TIL +AR L G + + +
Sbjct: 45 RPQSLGDVAAHRDIVDTIDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYGNMI 104
Query: 400 LELNASNDRGIDVVRNKIKMFAQQKVTLPPGRH---KIVILDEADSMTDGAQQALRR--- 561
LELNAS++RGIDVVR +I+ FA + +L G K+V+LDEAD+MT AQ ALRR
Sbjct: 105 LELNASDERGIDVVRQQIQDFASAR-SLSFGAKQSVKMVLLDEADAMTKDAQFALRRATS 163
Query: 562 -------TMELYSSTTRFALAANNSEKIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKE 720
+E ++ +TRFAL N+ KII +QSRC R++ L + ++ I E
Sbjct: 164 SNLPHLTVIEKHTRSTRFALICNHVNKIIPALQSRCTRFRFAPLDGTHVRERLKHIIQSE 223
Query: 721 NLSYTEEGVSAVVFTAQGDLRSALNNLQSTAQGFGHISPDNVFKVCDEPHPMVVRQMLEA 900
L + G++A+V + GD+R ALN LQST I+ + V+ P P + Q+
Sbjct: 224 GLDVDDGGLTALVRLSNGDMRKALNILQSTHMASKQITEEAVYLCTGNPMPKDIEQIAYW 283
Query: 901 XTKQDIHEAYKVIAKL-CKIGYAAEDIV 981
+ ++K I+ + + G A DI+
Sbjct: 284 LLNESFSTSFKCISDMKMRKGLALVDII 311
>03_06_0267 -
32751431-32751489,32751600-32751645,32751886-32751960,
32752045-32752114,32752288-32752386,32752505-32752641,
32753040-32753221,32753314-32753482,32753824-32753856,
32753958-32754068,32754184-32754295,32755592-32755727,
32756264-32756291
Length = 418
Score = 70.9 bits (166), Expect(2) = 2e-17
Identities = 46/136 (33%), Positives = 75/136 (55%), Gaps = 5/136 (3%)
Frame = +1
Query: 400 LELNASNDRGID---VVRNKIKMFAQQKVTLPPGRH--KIVILDEADSMTDGAQQALRRT 564
+E+N S D G VV+ IK A+ + G+ K+++L+E D ++ AQ +LRRT
Sbjct: 159 VEMNPS-DAGFQDRYVVQEVIKEMAKNRPIDAKGKRAFKVLVLNEVDKLSREAQHSLRRT 217
Query: 565 MELYSSTTRFALAANNSEKIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEG 744
ME YS++ R L N+S K+ E ++SRC +R + S+ QI+ + I KENL
Sbjct: 218 MEKYSASCRLILCCNSSSKVTEAVRSRCLNVRVNAPSEDQIVQVLEFIGKKENLQLPFGF 277
Query: 745 VSAVVFTAQGDLRSAL 792
+ + + +LR A+
Sbjct: 278 AARIAAQSNRNLRRAI 293
Score = 36.7 bits (81), Expect(2) = 2e-17
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAV 399
RP+T D + ++ L + P+++ GP G GK T ++ L + + G
Sbjct: 72 RPKTLDKVTVHDQVAQNLKKLVAEQDCPHLLFYGPSGSGKKTLVMALIKQMFGAGADKVK 131
Query: 400 LE 405
+E
Sbjct: 132 ME 133
>12_01_0671 - 5702051-5702159,5702493-5703216,5703910-5704476,
5704654-5704873,5705303-5707207
Length = 1174
Score = 60.9 bits (141), Expect = 2e-09
Identities = 61/277 (22%), Positives = 110/277 (39%), Gaps = 20/277 (7%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLA-VFAKTGNAPNIIIAGPPGVGKTTT-------ILCLA---R 366
RP+ F IVG L+ + AP + GP G GKT+T + CLA
Sbjct: 407 RPKLFSEIVGQHIVAQSLSNAITREKIAPAYLFQGPRGTGKTSTARIFSMGLSCLAPGEN 466
Query: 367 ALLGV-----SFKDA----VLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDE 519
G+ F ++E++ASN + I+ ++N ++ + R+K+ ++DE
Sbjct: 467 KPCGICKECTDFLSGNGTNLIEVDASNRKSINRIKNLLENIPPSATS---SRYKLFVVDE 523
Query: 520 ADSMTDGAQQALRRTMELYSSTTRFALAANNSEKIIEPIQSRCAVLRYSRLSDAQILAKV 699
++ A + ++ F + + + + SRC +S++ D I+ ++
Sbjct: 524 CHMVSSKLWSAFMKFLDEPLPRVVFVFITIDPDNLPRAVISRCQKYVFSKIKDIDIVCRL 583
Query: 700 IEICNKENLSYTEEGVSAVVFTAQGDLRSALNNLQSTAQGFGHISPDNVFKVCDEPHPMV 879
IC KENL + + + G LR A L + I+P V +
Sbjct: 584 RRICVKENLDVELAALDLIALNSDGSLRDAETMLDQLSLLGKKITPSLVNDLVGVVSEEK 643
Query: 880 VRQMLEAXTKQDIHEAYKVIAKLCKIGYAAEDIVSNI 990
+ +LE D E K +L G ++S +
Sbjct: 644 LLDLLEIAMSSDTAETVKRSRELMDSGIDPMALMSQL 680
>11_06_0143 + 20589574-20589684,20590256-20590873,20590943-20591010,
20591159-20591234,20591311-20591372,20591452-20591603,
20591889-20592052,20592129-20592317,20592417-20592538,
20592620-20592827,20593238-20593291,20593457-20593626,
20594265-20594355,20595405-20595529,20596372-20596444,
20596822-20596914,20597482-20597728,20598305-20598364,
20598461-20598590,20599008-20599014
Length = 939
Score = 59.3 bits (137), Expect = 6e-09
Identities = 43/186 (23%), Positives = 91/186 (48%), Gaps = 12/186 (6%)
Frame = +1
Query: 283 AKTGNAPNIIIAGPPGVGKTTTILCLARAL----LGVSFKDAVLELNASNDRGID-VVRN 447
A +G ++++GPPG+GKTTT +++ L + V+ D+ + ++ ++G+ N
Sbjct: 445 ADSGAKKAVLLSGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVGGSTSN 504
Query: 448 KIK-MFAQQKVTLPPGRHK----IVILDEADSMTDGAQQALRRTMELY--SSTTRFALAA 606
IK + + + R K ++++DE D M+ G + + + S +
Sbjct: 505 SIKELISNATLNYSNNRLKRPKAVLVMDEVDGMSAGDRGGVADLIASIKMSKIPIICICN 564
Query: 607 NNSEKIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRS 786
+ + ++ + + C +L + + + Q+ +++EI KE L E + + GD+R
Sbjct: 565 DRYSQKLKSLVNYCLLLNFRKPTKQQMGKRLMEIAKKEGLQAQENAMEELAERVHGDIRM 624
Query: 787 ALNNLQ 804
ALN+LQ
Sbjct: 625 ALNHLQ 630
>11_02_0042 - 7672565-7672729,7672902-7672977,7673409-7674132,
7674684-7674708,7675041-7675486,7676643-7676862,
7677609-7678459,7678697-7679555
Length = 1121
Score = 59.3 bits (137), Expect = 6e-09
Identities = 59/277 (21%), Positives = 110/277 (39%), Gaps = 20/277 (7%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLA-VFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDA 396
RP++F+ +VG V L + AP + GP G GKT+ + AL V+ +
Sbjct: 342 RPRSFNELVGQSFVVQSLNNAIIRERIAPAYLFHGPRGTGKTSAARIFSAALSCVAIGEN 401
Query: 397 -------------------VLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDE 519
++E++ASN + I+ +R+ I+ + R+K+ ++DE
Sbjct: 402 KPCGACMECTDFFTGNGINLIEVDASNRKSINRIRHLIENIPASATS---SRYKVFVVDE 458
Query: 520 ADSMTDGAQQALRRTMELYSSTTRFALAANNSEKIIEPIQSRCAVLRYSRLSDAQILAKV 699
++ A + ++ F + E + + SRC +S++ D I+ ++
Sbjct: 459 CHMVSSKVWSAFMKFLDEPLPRVVFIFITIDPENLPRAVISRCQKYMFSKIKDIDIVCRL 518
Query: 700 IEICNKENLSYTEEGVSAVVFTAQGDLRSALNNLQSTAQGFGHISPDNVFKVCDEPHPMV 879
+I KENL + + + G LR A L + I+P V +
Sbjct: 519 RKIAVKENLDVELAALDLIALNSDGSLRDAETMLDQLSLLGKKITPSLVNDLVGVVSEEK 578
Query: 880 VRQMLEAXTKQDIHEAYKVIAKLCKIGYAAEDIVSNI 990
+ +LE D E K +L G ++S +
Sbjct: 579 LLDLLEIAMSADTAETVKRSRELMDSGVDPMALMSQL 615
>03_02_0466 -
8690469-8690522,8691008-8691113,8691216-8691457,
8691477-8691546,8692224-8692499,8693058-8693137,
8693408-8693489,8693566-8693663,8693868-8693936,
8694015-8694113,8694681-8694737,8694874-8695039,
8695152-8695196,8695286-8695347,8695425-8695532,
8695719-8695769,8695843-8695944,8696362-8696448,
8696560-8696823,8696977-8697189,8697337-8697398,
8697517-8697849,8697943-8698138
Length = 973
Score = 45.2 bits (102), Expect = 1e-04
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Frame = +1
Query: 289 TGNAPN---IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKM 459
T NAP +++ GPPG+GKTT + +A G V+E+NAS+DR + KI
Sbjct: 349 TDNAPEQKVLLLCGPPGLGKTT-LAHVAAKHCGYH----VVEINASDDRSASSIEPKILD 403
Query: 460 FAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMELYSST 585
Q + + K +++DE D + A+ E +S+
Sbjct: 404 VIQMNSIMSDSKPKCLVIDEIDGALGDGKGAVEINAEKNNSS 445
>06_01_0400 +
2862684-2862872,2862956-2863170,2863298-2863448,
2863566-2863757,2864471-2864633,2864754-2864989,
2865446-2865622,2865707-2865826,2865939-2866241
Length = 581
Score = 37.5 bits (83), Expect = 0.020
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +1
Query: 304 NIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGID 435
++++ GPPGVGKTT I +AR +L ++ V+ ++ SN+ G D
Sbjct: 119 SLLLIGPPGVGKTTVIREIAR-MLADDYRKRVMIVDTSNEIGGD 161
>02_02_0522 -
11161385-11161537,11162513-11162668,11164176-11164298,
11164404-11164466,11164512-11164577,11165128-11165232,
11165336-11165435,11165520-11165590,11166037-11166093,
11167215-11167292,11167367-11167441,11168490-11168540,
11169015-11169094,11169560-11169660,11169749-11169810,
11170084-11170590
Length = 615
Score = 35.9 bits (79), Expect = 0.062
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +1
Query: 304 NIIIAGPPGVGKTTTILCLARALLGVSFKDA-VLELNASNDRGIDVVRNKIKMFAQQKVT 480
NI++ GP G GKT LAR + V F A L + G DV K+ A
Sbjct: 214 NILVMGPTGSGKTLLAKTLAR-FVNVPFVIADATTLTQAGYVGEDVESILYKLLAAADFD 272
Query: 481 LPPGRHKIVILDEADSMTDGAQ 546
+ + IV +DE D +T A+
Sbjct: 273 VAAAQQGIVYIDEVDKITKKAE 294
>12_01_0668 -
5682664-5682916,5684542-5684576,5684643-5684693,
5685362-5685505,5685981-5686265,5686369-5686441,
5687123-5687343,5687447-5687524,5687626-5687688,
5688700-5688900
Length = 467
Score = 35.5 bits (78), Expect = 0.082
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +1
Query: 304 NIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRG--IDVVRNKIKMFAQQKV 477
+I+ G PGVGKTT + +AR +L F+ V+ ++ SN+ G D+ I + +V
Sbjct: 182 SILFLGRPGVGKTTVMREIAR-VLADEFQKRVVIVDTSNEIGGDGDIPHAAIGGARRMQV 240
Query: 478 TLPPGRHKIVI 510
P +H+++I
Sbjct: 241 AQPSMQHRVMI 251
>02_05_0449 - 29107310-29107377,29107732-29107777,29107860-29107934,
29108053-29108122,29108313-29108408,29108728-29108914,
29109001-29109169,29109614-29109646,29109731-29109841,
29110070-29111256,29112380-29112448,29114417-29114975,
29115455-29115589,29115714-29115896
Length = 995
Score = 35.5 bits (78), Expect = 0.082
Identities = 36/178 (20%), Positives = 72/178 (40%), Gaps = 32/178 (17%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLG------- 378
RP+T + + +L T P+II GPPG GK++ + + G
Sbjct: 691 RPRTLGGFTCHREQIEQLKQLVSTEFCPHIIFKGPPGSGKSSLCRAVVTEIFGDSSLNVS 750
Query: 379 -------------------VSFKDAVLELNA---SNDRGIDVVRNKIKMFAQQKVTLPPG 492
+S D +ELN S + G V+ + +K T P
Sbjct: 751 HYLKSCSGQGSTSMPVLVPLSSSDHHMELNLRYYSKNAGY-VLMDLANEITNKKKTTDPS 809
Query: 493 RHK---IVILDEADSMTDGAQQALRRTMELYSSTTRFALAANNSEKIIEPIQSRCAVL 657
K +++L + D +++ Q+ ++ ++ S T + + + I++ ++SRC ++
Sbjct: 810 VRKKFKVIVLYDVDKVSESNQRLIKWMIDSSSDTHKILMTCQDESHILDSMKSRCKLI 867
>07_03_0057 +
12872946-12873152,12873371-12873421,12876335-12876480,
12876567-12876756
Length = 197
Score = 33.1 bits (72), Expect = 0.44
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 301 PNIIIAGPPGVGKTTTILCLARAL 372
PN+++ G PG GKTTT LA A+
Sbjct: 13 PNVLVTGTPGTGKTTTCSLLADAV 36
>06_03_1497 + 30585074-30586327
Length = 417
Score = 31.5 bits (68), Expect = 1.3
Identities = 25/78 (32%), Positives = 37/78 (47%)
Frame = +1
Query: 307 IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLP 486
I+I+GP G GKT L LA+ L G + + + RG+DV K + + +P
Sbjct: 28 IVISGPTGAGKTRLALDLAKRLSG----EIISADSVQVYRGLDV--GSAKPSSSDRAAVP 81
Query: 487 PGRHKIVILDEADSMTDG 540
H I IL +D + G
Sbjct: 82 --HHLIDILHASDDYSAG 97
>05_06_0104 -
25603568-25603867,25603965-25604162,25604247-25604526,
25604615-25605419,25605518-25606673
Length = 912
Score = 31.5 bits (68), Expect = 1.3
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +1
Query: 235 DXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALL 375
D ++G + + R+ N ++ G PGVGKT + LA+ ++
Sbjct: 181 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV 227
>04_04_1553 - 34363848-34366058,34369087-34370451
Length = 1191
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -3
Query: 374 RRARAKHSIVVVFPTPGGPAIIMLGALPVLAKTAKRDTV 258
RRARA H+++VV TP PA+ A +L+ A+ V
Sbjct: 32 RRARAVHALLVVSSTPSSPALTTFLANQLLSLYARLSAV 70
>03_05_0169 +
21474655-21474771,21474879-21474971,21475553-21475642,
21475728-21475811,21476088-21476252,21476995-21477182,
21477363-21477435,21477766-21477819,21478019-21478276,
21478891-21479097,21479293-21479396,21479809-21479953,
21480108-21480242,21480610-21480783
Length = 628
Score = 31.1 bits (67), Expect = 1.8
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 310 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTL-P 486
++ GPPG GKTTTI+ + L V +L ASN +D + ++ + + V L
Sbjct: 198 LLHGPPGTGKTTTIIEI--ILQEVKRGSKILACAASN-IAVDNIVERLSRYRTKLVRLGH 254
Query: 487 PGRHKIVILDEA 522
P R +LD A
Sbjct: 255 PARLLPQVLDSA 266
>05_07_0274 -
28873531-28873644,28873727-28873981,28874111-28874179,
28874277-28874415,28874511-28875076,28875225-28875326,
28875425-28875491,28875576-28876072,28876148-28876212,
28876470-28876567,28876652-28876694,28876870-28876963,
28877325-28877360,28877454-28877542,28877667-28877788,
28878193-28878404
Length = 855
Score = 30.7 bits (66), Expect = 2.3
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 5/112 (4%)
Frame = +1
Query: 307 IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLP 486
I++ GPPG GKT +A G SF + + S G D +N +F+ P
Sbjct: 538 ILLFGPPGTGKTMLAKAIAND-AGASFINVSMSTITSKWFGED-EKNVRALFSLAAKVAP 595
Query: 487 PGRHKIVILDEADSMTD-----GAQQALRRTMELYSSTTRFALAANNSEKII 627
I+ +DE DSM G +A+R+ + S L + + E+I+
Sbjct: 596 ----TIIFVDEVDSMLGQRARCGEHEAMRKIKNEFMSHWD-GLLSKSGERIL 642
>05_06_0196 +
26293889-26294122,26294317-26294375,26294454-26294554,
26294638-26294717,26294856-26294906,26295225-26295299,
26295386-26295463,26295700-26295756,26296226-26296296,
26296395-26296494,26296574-26296678,26296763-26296825,
26296940-26297062,26297129-26297193,26297352-26297358
Length = 422
Score = 30.7 bits (66), Expect = 2.3
Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +1
Query: 304 NIIIAGPPGVGKTTTILCLARALLGVSFKDA-VLELNASNDRGIDVVRNKIKMFAQQKVT 480
NI++ GP G GKT LAR V F A + + G DV + A K
Sbjct: 122 NILLIGPTGSGKTLLAKTLAR-FADVPFVIADATAITQAGYSGEDVESIICNLLAAAKFN 180
Query: 481 LPPGRHKIVILDEADSM 531
+ IV +DE D +
Sbjct: 181 VEATERGIVYIDEVDKL 197
>03_02_0326 +
7474352-7474448,7474913-7474977,7475105-7475191,
7475393-7475440,7476086-7476142,7476588-7476687,
7476875-7477185,7477298-7477667,7478745-7478876,
7479362-7479575,7479650-7479710,7480098-7480292
Length = 578
Score = 30.7 bits (66), Expect = 2.3
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 610 NSEKIIEPIQSRCA-VLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRS 786
NSE + +QS A + ++ ++ I ++ IC +E T++ V + ++ GD+R
Sbjct: 240 NSEDLESLLQSAGAHKISFNPVTVNSIKKILVRICKQEGSDLTDDLVHQIATSSGGDIRH 299
Query: 787 ALNNLQ 804
A+ +LQ
Sbjct: 300 AIMSLQ 305
>07_03_1756 -
29239137-29239325,29239741-29240259,29240693-29240800,
29240856-29241155,29241730-29241831,29243042-29243209,
29243878-29243991,29244184-29244288,29244372-29244502,
29244794-29244918,29245001-29245172,29245277-29245316,
29245636-29245722,29245803-29245868,29246412-29246510,
29246714-29246836,29247066-29247107,29247195-29247260,
29247362-29247553,29247672-29247737,29248839-29249141
Length = 1038
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 289 TGNAPNIIIAGPPGVGKTTTILCLARAL 372
T I ++GPPGVGKT+ +ARAL
Sbjct: 458 TSQGKIICLSGPPGVGKTSIGRSIARAL 485
>03_03_0186 + 15243150-15243563,15243685-15243777,15244604-15244666,
15245028-15245114,15245197-15245349,15245422-15245579,
15246458-15246692,15246782-15246892,15246942-15246968,
15247269-15248327,15248432-15248692,15249011-15249196,
15249642-15250793,15250886-15251236,15251343-15251738
Length = 1581
Score = 30.3 bits (65), Expect = 3.1
Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 2/114 (1%)
Frame = +1
Query: 289 TGNAPNI-IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFA 465
+G P + ++ GPPG GKT T + + L L + SN D+ ++
Sbjct: 893 SGIQPGLTMVVGPPGTGKTDTAVQILNVLYHNCPSQRTLIITHSNQALNDLFEKIMQRDV 952
Query: 466 QQKVTLPPGRHKIVILDEADSMTDGAQQA-LRRTMELYSSTTRFALAANNSEKI 624
+ L G+ + + + D G A L R +EL + A + + E +
Sbjct: 953 PARYLLRLGQGEQELATDLDFSRQGRVNAMLVRRLELLGEVAKLASSLHLPEDV 1006
>02_05_0693 -
30977323-30977421,30977783-30977843,30978874-30978996,
30979258-30979340,30979847-30979924,30980375-30980506,
30980685-30980728,30980966-30981090,30981468-30981769,
30981877-30981994,30982444-30982574,30983082-30983276,
30983362-30983646
Length = 591
Score = 30.3 bits (65), Expect = 3.1
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +1
Query: 295 NAPN-IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQ 471
N P ++ GPPG GKT++ +A+ GV LE+ S G + R +F+
Sbjct: 374 NRPRAVLFEGPPGTGKTSSARVIAKQ-AGVPLLYVPLEIIMSKYYG-ESERLLGSVFSLA 431
Query: 472 KVTLPPGRHKIVILDEADSMTDGAQQALRRTMELYSSTTR 591
LP G I+ LDE DS A R E++ +T R
Sbjct: 432 N-DLPDG--GIIFLDEVDSF------ASARDSEMHEATRR 462
>01_05_0749 +
24890944-24891146,24891414-24891535,24891633-24891721,
24891813-24891848,24892268-24892367,24892524-24892566,
24892645-24892739,24892978-24893036,24893114-24893613,
24893691-24893772,24893864-24894429,24894520-24894655,
24894750-24894812,24894942-24895172,24895282-24895395
Length = 812
Score = 30.3 bits (65), Expect = 3.1
Identities = 22/75 (29%), Positives = 33/75 (44%)
Frame = +1
Query: 307 IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLP 486
+++ GPPG GKT LA A G SF + + + + + I+ L
Sbjct: 506 VLLFGPPGTGKTMLAKALANA-AGASFLN--ISMASMTSKWYGESEKCIQALFSLAAKLA 562
Query: 487 PGRHKIVILDEADSM 531
P I+ +DE DSM
Sbjct: 563 PA---IIFIDEVDSM 574
>02_04_0114 +
19879468-19880671,19882007-19882179,19882265-19882605,
19882698-19882977,19883070-19883267,19883380-19883652
Length = 822
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 235 DXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLAR 366
D ++G + V R+ + ++ G PGVGKT LAR
Sbjct: 196 DPVIGRDDEVDRVVCILCRRTKNSAVLVGAPGVGKTAIAEGLAR 239
>11_06_0346 -
22549699-22549721,22549857-22549999,22550100-22552175,
22552305-22552822
Length = 919
Score = 29.5 bits (63), Expect = 5.4
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 235 DXIVGNEXTVSRLA--VFAKTGNAPNIIIAGPPGVGKTTTILCLARAL 372
D +VG + T + L + A + + IAGP G+GKTT + L R L
Sbjct: 55 DHLVGIDGTANELLGWLMAADKSLRVMAIAGPAGIGKTTLAMELHRRL 102
>09_06_0067 -
20645012-20645095,20645365-20645466,20645583-20645828,
20646042-20646236,20646343-20646636,20646952-20647134,
20647534-20647593,20647796-20648002,20648081-20648282,
20648367-20648494,20648759-20648842,20648955-20649134,
20649281-20649372,20649620-20649789,20650226-20650337,
20650451-20650554,20651262-20651371
Length = 850
Score = 29.5 bits (63), Expect = 5.4
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 301 PNIIIAGPPGVGKTTTILCLARAL 372
P + GPPGVGKT+ +A+AL
Sbjct: 402 PVLCFVGPPGVGKTSLASSIAKAL 425
>09_02_0499 -
9917891-9918148,9918240-9918494,9918769-9918940,
9919056-9919283,9919628-9919761,9919842-9919925,
9920007-9920297,9920569-9920901,9921029-9921171,
9921266-9921379,9921470-9921626,9921709-9921812,
9921914-9922074,9922158-9922474,9922574-9922855,
9923205-9923506,9923603-9923693,9923864-9923917,
9924052-9924128,9924213-9924372,9924473-9924557,
9924635-9924723,9925791-9925925
Length = 1341
Score = 29.5 bits (63), Expect = 5.4
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 310 IIAGPPGVGKTTTILCLA 363
++ GPPG GKTT +L LA
Sbjct: 78 LLLGPPGAGKTTLLLALA 95
>09_02_0188 - 5540598-5541116
Length = 172
Score = 29.5 bits (63), Expect = 5.4
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Frame = +1
Query: 535 DGAQQALRRTMELYSSTTRFAL---AANNSEKIIEPIQSRCAVLRYSRLSD--AQILAKV 699
DGA + + + S +F L AA+ S+ + I+ CA L++ + ILAKV
Sbjct: 9 DGAADGEKMILLISSDGAKFELSEAAASLSKTLGNMIEDDCATNGAIPLANVASDILAKV 68
Query: 700 IEICNK 717
+E CNK
Sbjct: 69 VEYCNK 74
>07_01_0629 -
4695778-4696077,4696242-4696406,4696497-4696673,
4697157-4697455,4697589-4697751,4697897-4698088,
4698211-4698385,4698527-4698741,4698948-4699385
Length = 707
Score = 29.5 bits (63), Expect = 5.4
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 304 NIIIAGPPGVGKTTTI 351
+I++ GPPGVGKTT I
Sbjct: 202 SILVIGPPGVGKTTLI 217
>06_01_0065 +
549972-550770,551577-552190,552392-552544,552769-552885,
552972-553076,553269-553334,553430-553494,553577-553778,
554026-554169,554212-554340
Length = 797
Score = 29.5 bits (63), Expect = 5.4
Identities = 27/88 (30%), Positives = 39/88 (44%)
Frame = +1
Query: 307 IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLP 486
+++ GPPG GKTT +A GV F S G N +F + T P
Sbjct: 228 LLLHGPPGCGKTTLAHAIANE-TGVPFYKISAPEVVSGVSGAS-EENIRSLFKKAYRTAP 285
Query: 487 PGRHKIVILDEADSMTDGAQQALRRTME 570
IV +DE D++ ++ L+R ME
Sbjct: 286 ----SIVFIDEIDAIA-SKRENLQREME 308
>06_01_0042 + 410061-410544,411401-411837
Length = 306
Score = 29.5 bits (63), Expect = 5.4
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +1
Query: 289 TGNAPNIII--AGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVV 441
+G P +++ +G GVGKTTT LA +L +S ++ +A R +D++
Sbjct: 32 SGPTPRVVVVTSGKGGVGKTTTTANLAASLARLSLSAVAVDADAGL-RNLDLL 83
>05_04_0102 +
18013994-18014049,18014236-18014335,18014499-18014783,
18014854-18015023,18015382-18015510,18016109-18016205,
18016318-18016395,18016474-18016635,18016673-18016771
Length = 391
Score = 29.5 bits (63), Expect = 5.4
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Frame = +1
Query: 253 EXTVSRLAVFAKTGNAP--NIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASN-D 423
E + A F + G +P +++ GPPG KTT A A F + EL +
Sbjct: 155 EWPIKHAASFDRLGISPIRGVLLHGPPGCSKTTLAKAAAHAAQASFFSLSGAELYSKYVG 214
Query: 424 RGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSM 531
G ++R + F ++ P I+ DEAD++
Sbjct: 215 EGEALLR---RTFQMARLASP----SIIFFDEADAI 243
>05_03_0157 - 9027777-9027862,9028142-9029357
Length = 433
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -3
Query: 878 TIGCGSSHTLNTLSGLM*PKPWAVDCRLFRADRKS 774
T+G GS +++TL+ + P PW CR+ RA+ S
Sbjct: 376 TLGGGSDPSVDTLTPCLLP-PWLASCRIPRAETLS 409
>04_04_0394 +
24905501-24905673,24907824-24907868,24908412-24908513,
24908700-24908799,24908963-24909247,24909318-24909487,
24909846-24909974,24910332-24910428,24910541-24910618,
24910694-24911017
Length = 500
Score = 29.5 bits (63), Expect = 5.4
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Frame = +1
Query: 253 EXTVSRLAVFAKTGNAP--NIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASN-D 423
E + A F + G +P +++ GPPG KTT A A F + EL +
Sbjct: 243 EWPIKHAASFDRLGISPIRGVLLHGPPGCSKTTLAKAAAHAAQASFFSLSGAELYSKYVG 302
Query: 424 RGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSM 531
G ++R + F ++ P I+ DEAD++
Sbjct: 303 EGEALLR---RTFQMARLASP----SIIFFDEADAI 331
>02_04_0067 -
19425019-19425288,19425393-19425647,19425766-19425937,
19426069-19426302,19426523-19426656,19427663-19427746,
19428355-19428645,19428788-19429120,19429317-19429390,
19429464-19429644,19429993-19430096,19430232-19430392,
19430727-19431040,19431583-19431864,19432431-19432732,
19433176-19433266,19433368-19433421,19438917-19438993,
19439081-19439240,19439410-19439494,19439574-19440130
Length = 1404
Score = 29.5 bits (63), Expect = 5.4
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 310 IIAGPPGVGKTTTILCLARAL 372
++ GPPG GKTT +L LA L
Sbjct: 189 LLLGPPGCGKTTLLLALAGKL 209
>08_02_0657 - 19749835-19751942,19753123-19753561
Length = 848
Score = 29.1 bits (62), Expect = 7.1
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +1
Query: 307 IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGI--DVVRNKIKMFAQQKVT 480
I++ GPPG GKT LARA+ S V+ G+ + N +FA+
Sbjct: 252 ILLYGPPGTGKT----LLARAIAAESGAHFVVVNGPEIMSGMPGESEANLRAVFAEADAA 307
Query: 481 LPPGRHKIVILDEADSMTDGAQQA 552
P IV +DE DS+ ++A
Sbjct: 308 AP----SIVFMDEIDSIAPSREKA 327
>08_02_0520 -
18121561-18121821,18122216-18122470,18122560-18122731,
18122824-18123105,18123159-18123292,18123425-18123508,
18123611-18123901,18123982-18124314,18124620-18124750,
18124826-18124930,18125011-18125167,18125248-18125351,
18125442-18125602,18125800-18126116,18126369-18126650,
18127011-18127312,18127609-18127699,18127771-18127824,
18128110-18128186,18128279-18128438,18128545-18128629,
18129059-18129367,18129514-18129890
Length = 1507
Score = 29.1 bits (62), Expect = 7.1
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 310 IIAGPPGVGKTTTILCLARAL 372
++ GPPG GKTT +L LA L
Sbjct: 232 LLLGPPGSGKTTLLLALAGKL 252
>04_04_0171 -
23282840-23283036,23283360-23283660,23283747-23284070,
23284678-23284698,23284877-23285788
Length = 584
Score = 29.1 bits (62), Expect = 7.1
Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Frame = +1
Query: 307 IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIK---MFAQQKV 477
+++ GPPG GKT LARA+ G + ++AS + V R + +F + K
Sbjct: 333 VLLVGPPGTGKT----LLARAVAGEA-GIPFFSVSASEFVEVFVGRGAARVRDLFKEAKE 387
Query: 478 TLPPGRHKIVILDEAD--------SMTDGAQQALRR---TMELYSSTTR-FALAANNSEK 621
P I+ +DE D S D Q L + M+ + S + +AA N K
Sbjct: 388 AAP----SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDMKVIVMAATNRPK 443
Query: 622 IIEPIQSRCAVLRYSR 669
++P + C R+SR
Sbjct: 444 ALDP--ALCRPGRFSR 457
>03_04_0140 +
17638335-17638583,17638843-17639061,17639206-17639443,
17640614-17640809,17640888-17640942,17641495-17641645,
17642501-17642809,17642950-17643215,17643311-17644237,
17644386-17644712
Length = 978
Score = 29.1 bits (62), Expect = 7.1
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALL 375
R D ++G + + R N ++ G PGVGKT LA+ ++
Sbjct: 256 RQGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIV 307
>03_02_0741 -
10857656-10857844,10858315-10858848,10859516-10859824,
10860521-10860622,10861446-10861613,10862734-10862847,
10863003-10863107,10863206-10863336,10863680-10863804,
10863890-10864061,10864411-10864505,10864771-10864841,
10864923-10865009,10865119-10865184,10865401-10865499,
10866631-10866672,10866757-10866822,10866910-10867101,
10867224-10867289,10868473-10868811
Length = 1023
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 307 IIIAGPPGVGKTTTILCLARAL 372
I + GPPGVGKT+ +ARAL
Sbjct: 477 ICLCGPPGVGKTSIGRSVARAL 498
>02_03_0314 -
17600970-17600974,17601230-17601357,17601832-17601924,
17602145-17602257,17602520-17602627,17602724-17602828,
17603185-17603355,17603474-17603652,17603741-17603969,
17604841-17604955,17605137-17605312,17606060-17606143,
17606463-17606630,17607011-17607097,17607201-17607323
Length = 627
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 301 PNIIIAGPPGVGKTTTILCLARALLG 378
P +I GP G GKTT I CL + G
Sbjct: 28 PLTLIVGPNGAGKTTIIECLKLSCTG 53
>02_02_0035 - 6253446-6255473
Length = 675
Score = 29.1 bits (62), Expect = 7.1
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +1
Query: 577 SSTTRFALAANNSEKIIEPIQSRCAVLRYSRLSDAQILAKVIE-ICNKENLSYTEEGVSA 753
SS R +LA NN I S L L+ + V + I N +L Y E ++
Sbjct: 318 SSLVRLSLAVNNLVGSIPGSLSELRKLERLILTYNNLSGPVPQSIFNMSSLQYLEMANNS 377
Query: 754 VVFTAQGDLRSALNNLQSTAQGFGHIS 834
++ D+ + L NLQS H+S
Sbjct: 378 LISQLPPDIGNRLPNLQSLILSMTHLS 404
>01_05_0662 -
24103475-24103735,24103831-24104085,24104280-24104451,
24104535-24104762,24104864-24104997,24105101-24105184,
24105273-24105563,24105660-24105992,24106081-24106334,
24106435-24106591,24106674-24106777,24106879-24107039,
24107216-24107529,24107614-24107895,24107991-24108292,
24108367-24108457,24108566-24108619,24108785-24108861,
24108963-24109207,24109322-24109410,24110811-24111254
Length = 1443
Score = 29.1 bits (62), Expect = 7.1
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 310 IIAGPPGVGKTTTILCLARAL 372
++ GPPG GKTT +L LA L
Sbjct: 181 LLLGPPGSGKTTLLLALAGKL 201
>01_05_0660 -
24071523-24071780,24071873-24072127,24072209-24072380,
24072458-24072685,24072785-24072918,24073005-24073088,
24073231-24073521,24073599-24073931,24074016-24074266,
24074354-24074620,24074707-24074867,24074978-24075294,
24075386-24075667,24075753-24076054,24076147-24076237,
24076326-24076379,24076497-24076573,24076700-24076859,
24077129-24077213,24077421-24077630,24077736-24078097
Length = 1457
Score = 29.1 bits (62), Expect = 7.1
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 310 IIAGPPGVGKTTTILCLARAL 372
++ GPPG GKTT +L LA L
Sbjct: 194 LLLGPPGSGKTTLLLALAGRL 214
>01_05_0659 -
24061318-24061575,24061664-24061918,24062001-24062172,
24062258-24062381,24062442-24062485,24063601-24063734,
24063822-24063905,24064100-24064390,24064713-24065045,
24065145-24065389,24065644-24065910,24065997-24066157,
24066253-24066569,24066665-24066946,24067024-24067325,
24067398-24067488,24067796-24067849,24067963-24068039,
24068159-24068318,24068653-24068737,24069029-24069238,
24069344-24069732
Length = 1444
Score = 29.1 bits (62), Expect = 7.1
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 310 IIAGPPGVGKTTTILCLARAL 372
++ GPPG GKTT +L LA L
Sbjct: 203 LLLGPPGSGKTTLLLALAGRL 223
>01_03_0179 +
13500413-13500768,13502522-13502642,13502876-13502998,
13504409-13504497,13504612-13504696,13504852-13505011,
13505096-13505160,13505296-13505349,13505437-13505527,
13505685-13505986,13506084-13506365,13506451-13506764,
13506920-13507080,13507202-13507305,13507379-13507535,
13507652-13507896,13507995-13508327,13508428-13508751,
13508816-13508899,13509001-13509169,13509610-13509731,
13510538-13510792,13511115-13511252
Length = 1377
Score = 29.1 bits (62), Expect = 7.1
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 310 IIAGPPGVGKTTTILCLARAL 372
++ GPPG GKTT +L LA L
Sbjct: 233 LLLGPPGSGKTTLLLALAGKL 253
>12_02_1267 - 27448871-27450445
Length = 524
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 280 FAKTGNA--PNIIIAGPPGVGKTTTILCLARAL 372
+AK G A ++ GPPG GK+T I +A L
Sbjct: 236 YAKVGKAWKRGYLLHGPPGTGKSTMIAAMANFL 268
>06_01_0369 +
2651192-2651862,2652103-2652158,2652816-2652874,
2653094-2653165,2653356-2653439,2654522-2654629,
2655543-2655605,2655733-2655813,2656316-2656421,
2657111-2657244,2657753-2657830,2658462-2658500,
2658673-2658755,2659228-2659300,2659842-2660012
Length = 625
Score = 28.7 bits (61), Expect = 9.4
Identities = 26/132 (19%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Frame = +1
Query: 307 IIIAGPPGVGKTTTILCLARAL---LGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKV 477
I++ G PGVGK++ IL LA + +G A++ + S + I+ + N+ ++
Sbjct: 246 ILVGGDPGVGKSSLILQLASIMSENIGAGESSAIVYV--SGEESIEQIGNR-----ADRM 298
Query: 478 TLPPGRHKIVILDEADSMTDGAQQALRRTMELYSSTTRFALA-ANNSEKIIEPIQSRCAV 654
++ + + + + D Q R + + S T + A ++ + + + A+
Sbjct: 299 SIKSRNLYLYSSTDIEDILDKIQPLSPRALIIDSIQTVYLRGFAGSAGNMTQVKECTSAL 358
Query: 655 LRYSRLSDAQIL 690
LR+++L++ ++
Sbjct: 359 LRFAKLTNIPVI 370
>04_04_0251 +
23930789-23930960,23931065-23931128,23931641-23931747,
23931832-23931899,23932068-23932097,23932357-23932460,
23932558-23932662,23932815-23932904,23932982-23933057,
23933292-23933361,23933799-23933869,23933945-23934035,
23934192-23934319,23934547-23934675,23934762-23934902
Length = 481
Score = 28.7 bits (61), Expect = 9.4
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Frame = +1
Query: 307 IIIAGPPGVGKTTTILCLARALLGVSFKD-----AVLELNASN--DRGIDVVRNKI-KMF 462
+++ GPPG GKT+ LA+ L + FK ++E+NA + + + K+F
Sbjct: 219 VLLHGPPGTGKTSLCKALAQK-LSIRFKSRYSMCQLIEVNAHSLFSKWFSESGKLVAKLF 277
Query: 463 AQ-QKVTLPPGRHKIVILDEADSMTDGAQQAL 555
+ Q++ V++DE +S+ Q A+
Sbjct: 278 QKIQEMVEEESNLVFVLIDEVESLAAARQAAI 309
>04_03_0687 +
18713603-18713962,18715318-18715539,18717068-18717256,
18717419-18717612,18718193-18718328
Length = 366
Score = 28.7 bits (61), Expect = 9.4
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +1
Query: 265 SRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDR 426
S L+ +T +I GP GVGK++ I L R+ +S +D + +L N +
Sbjct: 145 SGLSALEETLEGQTTVIVGPSGVGKSSLINAL-RSNQNISEEDPIHKLVEQNSK 197
>02_02_0543 +
11360514-11361350,11361434-11361559,11361648-11361976,
11362078-11362861
Length = 691
Score = 28.7 bits (61), Expect = 9.4
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +1
Query: 235 DXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALL-----GVSFKDAV 399
D +VG E + R+ + + ++ G GVGKT LA+ + GV V
Sbjct: 70 DPVVGREEEIDRVVCILSRKSKNSAVLVGAAGVGKTAIAEGLAQRIARGEVSGVLEGARV 129
Query: 400 LELNAS 417
+ELN +
Sbjct: 130 VELNVA 135
>02_01_0611 -
4567839-4568144,4568280-4569209,4569301-4569566,
4569662-4569970,4570497-4570647,4570958-4571012,
4571137-4571512,4571560-4571797,4571878-4572096,
4572629-4572910
Length = 1043
Score = 28.7 bits (61), Expect = 9.4
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 235 DXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALL 375
D ++G + V R N +I G PGVGKT LA+ ++
Sbjct: 332 DPVIGRDDEVRRCIQILCRRTKNNPVIIGEPGVGKTAIAEGLAQRIV 378
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,192,574
Number of Sequences: 37544
Number of extensions: 508569
Number of successful extensions: 1529
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 1464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1522
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3608253564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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