Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_I03
(1180 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M87338-1|AAB09786.1| 354|Homo sapiens replication factor C, 40-... 398 e-110
AF045555-4|AAC04860.1| 354|Homo sapiens replication factor C su... 398 e-110
AC005081-1|AAP22334.1| 354|Homo sapiens unknown protein. 398 e-110
BT007058-1|AAP35707.1| 320|Homo sapiens replication factor C (a... 231 5e-60
BC002813-1|AAH02813.1| 320|Homo sapiens replication factor C (a... 231 5e-60
AF483622-1|AAL82503.1| 320|Homo sapiens replication factor C (a... 231 5e-60
AC005081-2|AAP22335.1| 320|Homo sapiens unknown protein. 231 5e-60
L07540-1|AAB09784.1| 340|Homo sapiens replication factor C, 36-... 185 2e-46
BC013961-1|AAH13961.1| 340|Homo sapiens replication factor C (a... 185 2e-46
BC001866-1|AAH01866.1| 340|Homo sapiens replication factor C (a... 185 2e-46
AY254323-1|AAO63493.1| 340|Homo sapiens replication factor C (a... 185 2e-46
CR407651-1|CAG28579.1| 340|Homo sapiens RFC5 protein. 182 2e-45
AB208992-1|BAD92229.1| 351|Homo sapiens replication factor C 5 ... 182 2e-45
M87339-1|AAB09785.1| 363|Homo sapiens replication factor C, 37-... 174 4e-43
CR536561-1|CAG38798.1| 363|Homo sapiens RFC4 protein. 174 4e-43
BT006987-1|AAP35633.1| 363|Homo sapiens replication factor C (a... 174 4e-43
BC024022-1|AAH24022.1| 363|Homo sapiens replication factor C (a... 174 4e-43
BC017452-1|AAH17452.1| 363|Homo sapiens replication factor C (a... 174 4e-43
AF538718-1|AAM97933.1| 363|Homo sapiens replication factor C (a... 174 4e-43
L07541-1|AAB07268.1| 356|Homo sapiens replication factor C, 38-... 89 3e-17
BT019668-1|AAV38474.1| 356|Homo sapiens replication factor C (a... 89 3e-17
BC000149-1|AAH00149.1| 356|Homo sapiens replication factor C (a... 89 3e-17
AL139081-1|CAH70947.1| 356|Homo sapiens replication factor C (a... 89 3e-17
AF484446-1|AAL82505.1| 356|Homo sapiens replication factor C (a... 89 3e-17
AK222572-1|BAD96292.1| 356|Homo sapiens replication factor C 3 ... 88 5e-17
L23320-1|AAA16121.1| 1148|Homo sapiens replication factor C larg... 52 5e-06
BC051786-1|AAH51786.1| 1148|Homo sapiens RFC1 protein protein. 52 5e-06
BC051751-1|AAH51751.1| 1147|Homo sapiens replication factor C (a... 52 5e-06
BC035297-1|AAH35297.1| 1148|Homo sapiens replication factor C (a... 52 5e-06
AY600371-1|AAS94325.1| 1147|Homo sapiens replication factor C (a... 52 5e-06
Z22642-1|CAA80355.1| 1147|Homo sapiens PO-GA protein. 50 2e-05
AF040250-1|AAB99788.1| 1147|Homo sapiens DNA binding protein pro... 50 2e-05
AL139092-4|CAH73665.1| 445|Homo sapiens Werner helicase interac... 49 4e-05
AL139092-3|CAH73664.1| 665|Homo sapiens Werner helicase interac... 49 4e-05
AK223593-1|BAD97313.1| 665|Homo sapiens Werner helicase interac... 49 4e-05
AF218313-1|AAF80563.1| 445|Homo sapiens putative helicase RUVBL... 49 4e-05
AB209723-1|BAD92960.1| 646|Homo sapiens Werner helicase interac... 49 4e-05
BC018184-1|AAH18184.1| 975|Homo sapiens CTF18, chromosome trans... 46 2e-04
BC006437-1|AAH06437.1| 1016|Homo sapiens CHTF18 protein protein. 46 2e-04
BC006278-1|AAH06278.2| 975|Homo sapiens CTF18, chromosome trans... 46 2e-04
AL031033-2|CAB53056.1| 260|Homo sapiens protein ( Human DNA seq... 46 2e-04
AE006465-2|AAK61256.1| 1184|Homo sapiens some homology with holl... 46 2e-04
AB056152-1|BAB60709.1| 665|Homo sapiens Werner helicase interac... 46 3e-04
BC018923-1|AAH18923.1| 640|Homo sapiens Werner helicase interac... 41 0.008
AL139092-2|CAH73663.1| 640|Homo sapiens Werner helicase interac... 41 0.008
BC051867-1|AAH51867.1| 674|Homo sapiens fidgetin-like 1 protein. 37 0.12
BC027856-1|AAH27856.1| 674|Homo sapiens FIGNL1 protein protein. 37 0.12
AK023411-1|BAB14567.1| 254|Homo sapiens protein ( Homo sapiens ... 37 0.12
AK023142-1|BAB14426.1| 674|Homo sapiens protein ( Homo sapiens ... 37 0.12
AC018705-1|AAS01996.1| 674|Homo sapiens unknown protein. 37 0.12
AY557611-1|AAT52049.1| 1844|Homo sapiens chromosome fragility as... 33 2.7
AK022797-1|BAB14248.1| 801|Homo sapiens protein ( Homo sapiens ... 33 2.7
AJ314648-1|CAC44537.2| 1844|Homo sapiens ATP(GTP)-binding protei... 33 2.7
D42046-1|BAA07647.1| 1077|Homo sapiens KIAA0083 protein. 31 6.1
BC053574-1|AAH53574.1| 494|Homo sapiens DNA2L protein protein. 31 6.1
BC050576-1|AAH50576.1| 479|Homo sapiens chromosome 9 open readi... 31 6.1
BC041115-1|AAH41115.1| 435|Homo sapiens DNA2L protein protein. 31 6.1
BC034776-1|AAH34776.1| 479|Homo sapiens chromosome 9 open readi... 31 6.1
AY364261-1|AAQ76820.1| 310|Homo sapiens hypothetical protein pr... 31 6.1
AY072792-1|AAL68396.1| 994|Homo sapiens PAAD and NACHT-containi... 31 6.1
AL445645-1|CAH72109.1| 479|Homo sapiens chromosome 9 open readi... 31 6.1
AL160165-5|CAH70535.1| 479|Homo sapiens chromosome 9 open readi... 31 6.1
AL136233-5|CAI17238.1| 1040|Homo sapiens DNA2 DNA replication he... 31 6.1
AK057266-1|BAB71402.1| 479|Homo sapiens protein ( Homo sapiens ... 31 6.1
AK056688-1|BAB71254.1| 919|Homo sapiens protein ( Homo sapiens ... 31 6.1
AK022348-1|BAB14017.1| 392|Homo sapiens protein ( Homo sapiens ... 31 6.1
AK001211-1|BAA91556.1| 310|Homo sapiens protein ( Homo sapiens ... 31 6.1
AF482706-1|AAL88672.1| 916|Homo sapiens ribonuclease inhibitor ... 31 6.1
AF479747-1|AAL87104.1| 994|Homo sapiens PYRIN-containing APAF1-... 31 6.1
AF442488-1|AAL35293.1| 994|Homo sapiens NALP4 protein. 31 6.1
BC008634-1|AAH08634.1| 310|Homo sapiens ATP binding domain 1 fa... 31 8.1
BC007815-1|AAH07815.1| 310|Homo sapiens ATP binding domain 1 fa... 31 8.1
BC000981-1|AAH00981.1| 753|Homo sapiens spermatogenesis associa... 31 8.1
AY358864-1|AAQ89223.1| 310|Homo sapiens AGAA5828 protein. 31 8.1
AL034380-4|CAB92117.1| 310|Homo sapiens novel protein protein. 31 8.1
AL034380-3|CAI21619.1| 172|Homo sapiens novel protein protein. 31 8.1
AK023232-1|BAB14482.1| 620|Homo sapiens protein ( Homo sapiens ... 31 8.1
AK022535-1|BAB14084.1| 310|Homo sapiens protein ( Homo sapiens ... 31 8.1
>M87338-1|AAB09786.1| 354|Homo sapiens replication factor C, 40-kDa
subunit protein.
Length = 354
Score = 398 bits (981), Expect = e-110
Identities = 186/260 (71%), Positives = 222/260 (85%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAV 399
RP + IVGNE TVSRL VFA+ GN PNIIIAGPPG GKTT+ILCLARALLG + KDA+
Sbjct: 43 RPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAM 102
Query: 400 LELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMELYS 579
LELNASNDRGIDVVRNKIKMFAQQKVTLP GRHKI+ILDEADSMTDGAQQALRRTME+YS
Sbjct: 103 LELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYS 162
Query: 580 STTRFALAANNSEKIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVV 759
TTRFALA N S+KIIEPIQSRCAVLRY++L+DAQIL +++ + KE + YT++G+ A++
Sbjct: 163 KTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLMNVIEKERVPYTDDGLEAII 222
Query: 760 FTAQGDLRSALNNLQSTAQGFGHISPDNVFKVCDEPHPMVVRQMLEAXTKQDIHEAYKVI 939
FTAQGD+R ALNNLQST GFG I+ +NVFKVCDEPHP++V++M++ +I EAYK++
Sbjct: 223 FTAQGDMRQALNNLQSTFSGFGFINSENVFKVCDEPHPLLVKEMIQHCVNANIDEAYKIL 282
Query: 940 AKLCKIGYAAEDIVSNIFRV 999
A L +GY+ EDI+ NIFRV
Sbjct: 283 AHLWHLGYSPEDIIGNIFRV 302
>AF045555-4|AAC04860.1| 354|Homo sapiens replication factor C
subunit 2 protein.
Length = 354
Score = 398 bits (981), Expect = e-110
Identities = 186/260 (71%), Positives = 222/260 (85%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAV 399
RP + IVGNE TVSRL VFA+ GN PNIIIAGPPG GKTT+ILCLARALLG + KDA+
Sbjct: 43 RPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAM 102
Query: 400 LELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMELYS 579
LELNASNDRGIDVVRNKIKMFAQQKVTLP GRHKI+ILDEADSMTDGAQQALRRTME+YS
Sbjct: 103 LELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYS 162
Query: 580 STTRFALAANNSEKIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVV 759
TTRFALA N S+KIIEPIQSRCAVLRY++L+DAQIL +++ + KE + YT++G+ A++
Sbjct: 163 KTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLMNVIEKERVPYTDDGLEAII 222
Query: 760 FTAQGDLRSALNNLQSTAQGFGHISPDNVFKVCDEPHPMVVRQMLEAXTKQDIHEAYKVI 939
FTAQGD+R ALNNLQST GFG I+ +NVFKVCDEPHP++V++M++ +I EAYK++
Sbjct: 223 FTAQGDMRQALNNLQSTFSGFGFINSENVFKVCDEPHPLLVKEMIQHCVNANIDEAYKIL 282
Query: 940 AKLCKIGYAAEDIVSNIFRV 999
A L +GY+ EDI+ NIFRV
Sbjct: 283 AHLWHLGYSPEDIIGNIFRV 302
>AC005081-1|AAP22334.1| 354|Homo sapiens unknown protein.
Length = 354
Score = 398 bits (981), Expect = e-110
Identities = 186/260 (71%), Positives = 222/260 (85%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAV 399
RP + IVGNE TVSRL VFA+ GN PNIIIAGPPG GKTT+ILCLARALLG + KDA+
Sbjct: 43 RPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAM 102
Query: 400 LELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMELYS 579
LELNASNDRGIDVVRNKIKMFAQQKVTLP GRHKI+ILDEADSMTDGAQQALRRTME+YS
Sbjct: 103 LELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYS 162
Query: 580 STTRFALAANNSEKIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVV 759
TTRFALA N S+KIIEPIQSRCAVLRY++L+DAQIL +++ + KE + YT++G+ A++
Sbjct: 163 KTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLMNVIEKERVPYTDDGLEAII 222
Query: 760 FTAQGDLRSALNNLQSTAQGFGHISPDNVFKVCDEPHPMVVRQMLEAXTKQDIHEAYKVI 939
FTAQGD+R ALNNLQST GFG I+ +NVFKVCDEPHP++V++M++ +I EAYK++
Sbjct: 223 FTAQGDMRQALNNLQSTFSGFGFINSENVFKVCDEPHPLLVKEMIQHCVNANIDEAYKIL 282
Query: 940 AKLCKIGYAAEDIVSNIFRV 999
A L +GY+ EDI+ NIFRV
Sbjct: 283 AHLWHLGYSPEDIIGNIFRV 302
>BT007058-1|AAP35707.1| 320|Homo sapiens replication factor C
(activator 1) 2, 40kDa protein.
Length = 320
Score = 231 bits (564), Expect = 5e-60
Identities = 103/159 (64%), Positives = 133/159 (83%)
Frame = +1
Query: 523 DSMTDGAQQALRRTMELYSSTTRFALAANNSEKIIEPIQSRCAVLRYSRLSDAQILAKVI 702
DSMTDGAQQALRRTME+YS TTRFALA N S+KIIEPIQSRCAVLRY++L+DAQIL +++
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLM 169
Query: 703 EICNKENLSYTEEGVSAVVFTAQGDLRSALNNLQSTAQGFGHISPDNVFKVCDEPHPMVV 882
+ KE + YT++G+ A++FTAQGD+R ALNNLQST GFG I+ +NVFKVCDEPHP++V
Sbjct: 170 NVIEKERVPYTDDGLEAIIFTAQGDMRQALNNLQSTFSGFGFINSENVFKVCDEPHPLLV 229
Query: 883 RQMLEAXTKQDIHEAYKVIAKLCKIGYAAEDIVSNIFRV 999
++M++ +I EAYK++A L +GY+ EDI+ NIFRV
Sbjct: 230 KEMIQHCVNANIDEAYKILAHLWHLGYSPEDIIGNIFRV 268
Score = 109 bits (262), Expect = 2e-23
Identities = 53/79 (67%), Positives = 61/79 (77%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAV 399
RP + IVGNE TVSRL VFA+ GN PNIIIAGPPG GKTT+ILCLARALLG + KDA+
Sbjct: 43 RPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAM 102
Query: 400 LELNASNDRGIDVVRNKIK 456
LELNASND D + ++
Sbjct: 103 LELNASNDSMTDGAQQALR 121
>BC002813-1|AAH02813.1| 320|Homo sapiens replication factor C
(activator 1) 2, 40kDa protein.
Length = 320
Score = 231 bits (564), Expect = 5e-60
Identities = 103/159 (64%), Positives = 133/159 (83%)
Frame = +1
Query: 523 DSMTDGAQQALRRTMELYSSTTRFALAANNSEKIIEPIQSRCAVLRYSRLSDAQILAKVI 702
DSMTDGAQQALRRTME+YS TTRFALA N S+KIIEPIQSRCAVLRY++L+DAQIL +++
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLM 169
Query: 703 EICNKENLSYTEEGVSAVVFTAQGDLRSALNNLQSTAQGFGHISPDNVFKVCDEPHPMVV 882
+ KE + YT++G+ A++FTAQGD+R ALNNLQST GFG I+ +NVFKVCDEPHP++V
Sbjct: 170 NVIEKERVPYTDDGLEAIIFTAQGDMRQALNNLQSTFSGFGFINSENVFKVCDEPHPLLV 229
Query: 883 RQMLEAXTKQDIHEAYKVIAKLCKIGYAAEDIVSNIFRV 999
++M++ +I EAYK++A L +GY+ EDI+ NIFRV
Sbjct: 230 KEMIQHCVNANIDEAYKILAHLWHLGYSPEDIIGNIFRV 268
Score = 109 bits (262), Expect = 2e-23
Identities = 53/79 (67%), Positives = 61/79 (77%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAV 399
RP + IVGNE TVSRL VFA+ GN PNIIIAGPPG GKTT+ILCLARALLG + KDA+
Sbjct: 43 RPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAM 102
Query: 400 LELNASNDRGIDVVRNKIK 456
LELNASND D + ++
Sbjct: 103 LELNASNDSMTDGAQQALR 121
>AF483622-1|AAL82503.1| 320|Homo sapiens replication factor C
(activator 1) 2 (40kD) protein.
Length = 320
Score = 231 bits (564), Expect = 5e-60
Identities = 103/159 (64%), Positives = 133/159 (83%)
Frame = +1
Query: 523 DSMTDGAQQALRRTMELYSSTTRFALAANNSEKIIEPIQSRCAVLRYSRLSDAQILAKVI 702
DSMTDGAQQALRRTME+YS TTRFALA N S+KIIEPIQSRCAVLRY++L+DAQIL +++
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLM 169
Query: 703 EICNKENLSYTEEGVSAVVFTAQGDLRSALNNLQSTAQGFGHISPDNVFKVCDEPHPMVV 882
+ KE + YT++G+ A++FTAQGD+R ALNNLQST GFG I+ +NVFKVCDEPHP++V
Sbjct: 170 NVIEKERVPYTDDGLEAIIFTAQGDMRQALNNLQSTFSGFGFINSENVFKVCDEPHPLLV 229
Query: 883 RQMLEAXTKQDIHEAYKVIAKLCKIGYAAEDIVSNIFRV 999
++M++ +I EAYK++A L +GY+ EDI+ NIFRV
Sbjct: 230 KEMIQHCVNANIDEAYKILAHLWHLGYSPEDIIGNIFRV 268
Score = 109 bits (262), Expect = 2e-23
Identities = 53/79 (67%), Positives = 61/79 (77%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAV 399
RP + IVGNE TVSRL VFA+ GN PNIIIAGPPG GKTT+ILCLARALLG + KDA+
Sbjct: 43 RPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAM 102
Query: 400 LELNASNDRGIDVVRNKIK 456
LELNASND D + ++
Sbjct: 103 LELNASNDSMTDGAQQALR 121
>AC005081-2|AAP22335.1| 320|Homo sapiens unknown protein.
Length = 320
Score = 231 bits (564), Expect = 5e-60
Identities = 103/159 (64%), Positives = 133/159 (83%)
Frame = +1
Query: 523 DSMTDGAQQALRRTMELYSSTTRFALAANNSEKIIEPIQSRCAVLRYSRLSDAQILAKVI 702
DSMTDGAQQALRRTME+YS TTRFALA N S+KIIEPIQSRCAVLRY++L+DAQIL +++
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLM 169
Query: 703 EICNKENLSYTEEGVSAVVFTAQGDLRSALNNLQSTAQGFGHISPDNVFKVCDEPHPMVV 882
+ KE + YT++G+ A++FTAQGD+R ALNNLQST GFG I+ +NVFKVCDEPHP++V
Sbjct: 170 NVIEKERVPYTDDGLEAIIFTAQGDMRQALNNLQSTFSGFGFINSENVFKVCDEPHPLLV 229
Query: 883 RQMLEAXTKQDIHEAYKVIAKLCKIGYAAEDIVSNIFRV 999
++M++ +I EAYK++A L +GY+ EDI+ NIFRV
Sbjct: 230 KEMIQHCVNANIDEAYKILAHLWHLGYSPEDIIGNIFRV 268
Score = 109 bits (262), Expect = 2e-23
Identities = 53/79 (67%), Positives = 61/79 (77%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAV 399
RP + IVGNE TVSRL VFA+ GN PNIIIAGPPG GKTT+ILCLARALLG + KDA+
Sbjct: 43 RPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAM 102
Query: 400 LELNASNDRGIDVVRNKIK 456
LELNASND D + ++
Sbjct: 103 LELNASNDSMTDGAQQALR 121
>L07540-1|AAB09784.1| 340|Homo sapiens replication factor C, 36-kDa
subunit protein.
Length = 340
Score = 185 bits (451), Expect = 2e-46
Identities = 99/259 (38%), Positives = 149/259 (57%), Gaps = 2/259 (0%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALL-GVSFKDA 396
RPQT + ++ ++ +S + F P++++ GPPG GKT+TIL A+ L F
Sbjct: 27 RPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQLYKDKEFGSM 86
Query: 397 VLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMELY 576
VLELNAS+DRGID++R I FA + G K+VILDEAD+MT AQ ALRR +E +
Sbjct: 87 VLELNASDDRGIDIIRGPILSFASTRTIFKKG-FKLVILDEADAMTQDAQNALRRVIEKF 145
Query: 577 SSTTRFALAANNSEKIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAV 756
+ TRF L N KII +QSRC R+ L+ ++ ++ + +E + +E+G+ A+
Sbjct: 146 TENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVDISEDGMKAL 205
Query: 757 VFTAQGDLRSALNNLQSTAQGFGHISPDNVFKVCDEPHPMVVRQMLEAXTKQDIHEAYKV 936
V + GD+R ALN LQST FG ++ + V+ P + +L+ QD AY+
Sbjct: 206 VTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGHPLKSDIANILDWMLNQDFTTAYRN 265
Query: 937 IAKLCKI-GYAAEDIVSNI 990
I +L + G A DI++ I
Sbjct: 266 ITELKTLKGLALHDILTEI 284
>BC013961-1|AAH13961.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 185 bits (451), Expect = 2e-46
Identities = 99/259 (38%), Positives = 149/259 (57%), Gaps = 2/259 (0%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALL-GVSFKDA 396
RPQT + ++ ++ +S + F P++++ GPPG GKT+TIL A+ L F
Sbjct: 27 RPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQLYKDKEFGSM 86
Query: 397 VLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMELY 576
VLELNAS+DRGID++R I FA + G K+VILDEAD+MT AQ ALRR +E +
Sbjct: 87 VLELNASDDRGIDIIRGPILSFASTRTIFKKG-FKLVILDEADAMTQDAQNALRRVIEKF 145
Query: 577 SSTTRFALAANNSEKIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAV 756
+ TRF L N KII +QSRC R+ L+ ++ ++ + +E + +E+G+ A+
Sbjct: 146 TENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVDISEDGMKAL 205
Query: 757 VFTAQGDLRSALNNLQSTAQGFGHISPDNVFKVCDEPHPMVVRQMLEAXTKQDIHEAYKV 936
V + GD+R ALN LQST FG ++ + V+ P + +L+ QD AY+
Sbjct: 206 VTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGHPLKSDIANILDWMLNQDFTTAYRN 265
Query: 937 IAKLCKI-GYAAEDIVSNI 990
I +L + G A DI++ I
Sbjct: 266 ITELKTLKGLALHDILTEI 284
>BC001866-1|AAH01866.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 185 bits (451), Expect = 2e-46
Identities = 99/259 (38%), Positives = 149/259 (57%), Gaps = 2/259 (0%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALL-GVSFKDA 396
RPQT + ++ ++ +S + F P++++ GPPG GKT+TIL A+ L F
Sbjct: 27 RPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQLYKDKEFGSM 86
Query: 397 VLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMELY 576
VLELNAS+DRGID++R I FA + G K+VILDEAD+MT AQ ALRR +E +
Sbjct: 87 VLELNASDDRGIDIIRGPILSFASTRTIFKKG-FKLVILDEADAMTQDAQNALRRVIEKF 145
Query: 577 SSTTRFALAANNSEKIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAV 756
+ TRF L N KII +QSRC R+ L+ ++ ++ + +E + +E+G+ A+
Sbjct: 146 TENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVDISEDGMKAL 205
Query: 757 VFTAQGDLRSALNNLQSTAQGFGHISPDNVFKVCDEPHPMVVRQMLEAXTKQDIHEAYKV 936
V + GD+R ALN LQST FG ++ + V+ P + +L+ QD AY+
Sbjct: 206 VTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGHPLKSDIANILDWMLNQDFTTAYRN 265
Query: 937 IAKLCKI-GYAAEDIVSNI 990
I +L + G A DI++ I
Sbjct: 266 ITELKTLKGLALHDILTEI 284
>AY254323-1|AAO63493.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 185 bits (451), Expect = 2e-46
Identities = 99/259 (38%), Positives = 149/259 (57%), Gaps = 2/259 (0%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALL-GVSFKDA 396
RPQT + ++ ++ +S + F P++++ GPPG GKT+TIL A+ L F
Sbjct: 27 RPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQLYKDKEFGSM 86
Query: 397 VLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMELY 576
VLELNAS+DRGID++R I FA + G K+VILDEAD+MT AQ ALRR +E +
Sbjct: 87 VLELNASDDRGIDIIRGPILSFASTRTIFKKG-FKLVILDEADAMTQDAQNALRRVIEKF 145
Query: 577 SSTTRFALAANNSEKIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAV 756
+ TRF L N KII +QSRC R+ L+ ++ ++ + +E + +E+G+ A+
Sbjct: 146 TENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVDISEDGMKAL 205
Query: 757 VFTAQGDLRSALNNLQSTAQGFGHISPDNVFKVCDEPHPMVVRQMLEAXTKQDIHEAYKV 936
V + GD+R ALN LQST FG ++ + V+ P + +L+ QD AY+
Sbjct: 206 VTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGHPLKSDIANILDWMLNQDFTTAYRN 265
Query: 937 IAKLCKI-GYAAEDIVSNI 990
I +L + G A DI++ I
Sbjct: 266 ITELKTLKGLALHDILTEI 284
>CR407651-1|CAG28579.1| 340|Homo sapiens RFC5 protein.
Length = 340
Score = 182 bits (444), Expect = 2e-45
Identities = 98/259 (37%), Positives = 148/259 (57%), Gaps = 2/259 (0%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALL-GVSFKDA 396
RPQT + ++ ++ +S + F P++++ GPPG GKT+TIL A+ L F
Sbjct: 27 RPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQLYKDKEFGSM 86
Query: 397 VLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMELY 576
VLELNAS+DRGID++R I FA + G K+VILDEAD+MT AQ ALR +E +
Sbjct: 87 VLELNASDDRGIDIIRGPILSFASTRTIFKKG-FKLVILDEADAMTQDAQNALRGVIEKF 145
Query: 577 SSTTRFALAANNSEKIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAV 756
+ TRF L N KII +QSRC R+ L+ ++ ++ + +E + +E+G+ A+
Sbjct: 146 TENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVDISEDGMKAL 205
Query: 757 VFTAQGDLRSALNNLQSTAQGFGHISPDNVFKVCDEPHPMVVRQMLEAXTKQDIHEAYKV 936
V + GD+R ALN LQST FG ++ + V+ P + +L+ QD AY+
Sbjct: 206 VTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGHPLKSDIANILDWMLNQDFTTAYRN 265
Query: 937 IAKLCKI-GYAAEDIVSNI 990
I +L + G A DI++ I
Sbjct: 266 ITELKTLKGLALHDILTEI 284
>AB208992-1|BAD92229.1| 351|Homo sapiens replication factor C 5
isoform 1 variant protein.
Length = 351
Score = 182 bits (444), Expect = 2e-45
Identities = 98/258 (37%), Positives = 147/258 (56%), Gaps = 1/258 (0%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALL-GVSFKDA 396
RPQT + ++ ++ +S + F P++++ GPPG GKT+TIL A+ L F
Sbjct: 41 RPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQLYKDKEFGSM 100
Query: 397 VLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMELY 576
VLELNAS+DRGID++R I FA + G K+VILDEAD+MT AQ ALRR +E +
Sbjct: 101 VLELNASDDRGIDIIRGPILSFASTRTIFKKG-FKLVILDEADAMTQDAQNALRRVIEKF 159
Query: 577 SSTTRFALAANNSEKIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAV 756
+ TRF L N KII +QSRC R+ L+ ++ ++ + +E + +E+G+ A+
Sbjct: 160 TENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVDISEDGMKAL 219
Query: 757 VFTAQGDLRSALNNLQSTAQGFGHISPDNVFKVCDEPHPMVVRQMLEAXTKQDIHEAYKV 936
V + GD+R ALN LQST FG ++ + V+ P + +L+ QD AY+
Sbjct: 220 VTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGHPLKSDIANILDWMLNQDFTTAYRK 279
Query: 937 IAKLCKIGYAAEDIVSNI 990
+ L G A DI++ I
Sbjct: 280 LKTL--KGLALHDILTEI 295
>M87339-1|AAB09785.1| 363|Homo sapiens replication factor C, 37-kDa
subunit protein.
Length = 363
Score = 174 bits (424), Expect = 4e-43
Identities = 107/269 (39%), Positives = 149/269 (55%), Gaps = 9/269 (3%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVS-FKDA 396
RP+ D + E V+ L + + PN++ GPPG GKT+TIL AR L G F+
Sbjct: 45 RPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLR 104
Query: 397 VLELNASNDRGIDVVRNKIKMFAQQKVT------LPPGRHKIVILDEADSMTDGAQQALR 558
VLELNAS++RGI VVR K+K FAQ V+ P KIVILDEADSMT AQ ALR
Sbjct: 105 VLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALR 164
Query: 559 RTMELYSSTTRFALAANNSEKIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTE 738
RTME S TTRF L N +IIEP+ SRC+ R+ LSD ++++I KEN+ ++
Sbjct: 165 RTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKKENVKISD 224
Query: 739 EGVSAVVFTAQGDLRSALNNLQSTAQ--GFGHISPDNVFKVCDEPHPMVVRQMLEAXTKQ 912
EG++ +V ++GDLR A+ LQS + G I+ + + + + A
Sbjct: 225 EGIAYLVKVSEGDLRKAITFLQSATRLTGGKEITEKVITDIAGVIPAEKIDGVFAACQSG 284
Query: 913 DIHEAYKVIAKLCKIGYAAEDIVSNIFRV 999
+ V+ L G+AA +V+ + V
Sbjct: 285 SFDKLEAVVKDLIDEGHAATQLVNQLHDV 313
>CR536561-1|CAG38798.1| 363|Homo sapiens RFC4 protein.
Length = 363
Score = 174 bits (424), Expect = 4e-43
Identities = 107/269 (39%), Positives = 149/269 (55%), Gaps = 9/269 (3%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVS-FKDA 396
RP+ D + E V+ L + + PN++ GPPG GKT+TIL AR L G F+
Sbjct: 45 RPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLR 104
Query: 397 VLELNASNDRGIDVVRNKIKMFAQQKVT------LPPGRHKIVILDEADSMTDGAQQALR 558
VLELNAS++RGI VVR K+K FAQ V+ P KIVILDEADSMT AQ ALR
Sbjct: 105 VLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALR 164
Query: 559 RTMELYSSTTRFALAANNSEKIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTE 738
RTME S TTRF L N +IIEP+ SRC+ R+ LSD ++++I KEN+ ++
Sbjct: 165 RTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKKENVKISD 224
Query: 739 EGVSAVVFTAQGDLRSALNNLQSTAQ--GFGHISPDNVFKVCDEPHPMVVRQMLEAXTKQ 912
EG++ +V ++GDLR A+ LQS + G I+ + + + + A
Sbjct: 225 EGIAYLVKVSEGDLRKAITFLQSATRLTGGKEITEKVITDIAGVIPAEKIDGVFAACQSG 284
Query: 913 DIHEAYKVIAKLCKIGYAAEDIVSNIFRV 999
+ V+ L G+AA +V+ + V
Sbjct: 285 SFDKLEAVVKDLIDEGHAATQLVNQLHDV 313
>BT006987-1|AAP35633.1| 363|Homo sapiens replication factor C
(activator 1) 4, 37kDa protein.
Length = 363
Score = 174 bits (424), Expect = 4e-43
Identities = 107/269 (39%), Positives = 149/269 (55%), Gaps = 9/269 (3%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVS-FKDA 396
RP+ D + E V+ L + + PN++ GPPG GKT+TIL AR L G F+
Sbjct: 45 RPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLR 104
Query: 397 VLELNASNDRGIDVVRNKIKMFAQQKVT------LPPGRHKIVILDEADSMTDGAQQALR 558
VLELNAS++RGI VVR K+K FAQ V+ P KIVILDEADSMT AQ ALR
Sbjct: 105 VLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALR 164
Query: 559 RTMELYSSTTRFALAANNSEKIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTE 738
RTME S TTRF L N +IIEP+ SRC+ R+ LSD ++++I KEN+ ++
Sbjct: 165 RTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKKENVKISD 224
Query: 739 EGVSAVVFTAQGDLRSALNNLQSTAQ--GFGHISPDNVFKVCDEPHPMVVRQMLEAXTKQ 912
EG++ +V ++GDLR A+ LQS + G I+ + + + + A
Sbjct: 225 EGIAYLVKVSEGDLRKAITFLQSATRLTGGKEITEKVITDIAGVIPAEKIDGVFAACQSG 284
Query: 913 DIHEAYKVIAKLCKIGYAAEDIVSNIFRV 999
+ V+ L G+AA +V+ + V
Sbjct: 285 SFDKLEAVVKDLIDEGHAATQLVNQLHDV 313
>BC024022-1|AAH24022.1| 363|Homo sapiens replication factor C
(activator 1) 4, 37kDa protein.
Length = 363
Score = 174 bits (424), Expect = 4e-43
Identities = 107/269 (39%), Positives = 149/269 (55%), Gaps = 9/269 (3%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVS-FKDA 396
RP+ D + E V+ L + + PN++ GPPG GKT+TIL AR L G F+
Sbjct: 45 RPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLR 104
Query: 397 VLELNASNDRGIDVVRNKIKMFAQQKVT------LPPGRHKIVILDEADSMTDGAQQALR 558
VLELNAS++RGI VVR K+K FAQ V+ P KIVILDEADSMT AQ ALR
Sbjct: 105 VLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALR 164
Query: 559 RTMELYSSTTRFALAANNSEKIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTE 738
RTME S TTRF L N +IIEP+ SRC+ R+ LSD ++++I KEN+ ++
Sbjct: 165 RTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKKENVKISD 224
Query: 739 EGVSAVVFTAQGDLRSALNNLQSTAQ--GFGHISPDNVFKVCDEPHPMVVRQMLEAXTKQ 912
EG++ +V ++GDLR A+ LQS + G I+ + + + + A
Sbjct: 225 EGIAYLVKVSEGDLRKAITFLQSATRLTGGKEITEKVITDIAGVIPAEKIDGVFAACQSG 284
Query: 913 DIHEAYKVIAKLCKIGYAAEDIVSNIFRV 999
+ V+ L G+AA +V+ + V
Sbjct: 285 SFDKLEAVVKDLIDEGHAATQLVNQLHDV 313
>BC017452-1|AAH17452.1| 363|Homo sapiens replication factor C
(activator 1) 4, 37kDa protein.
Length = 363
Score = 174 bits (424), Expect = 4e-43
Identities = 107/269 (39%), Positives = 149/269 (55%), Gaps = 9/269 (3%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVS-FKDA 396
RP+ D + E V+ L + + PN++ GPPG GKT+TIL AR L G F+
Sbjct: 45 RPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLR 104
Query: 397 VLELNASNDRGIDVVRNKIKMFAQQKVT------LPPGRHKIVILDEADSMTDGAQQALR 558
VLELNAS++RGI VVR K+K FAQ V+ P KIVILDEADSMT AQ ALR
Sbjct: 105 VLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALR 164
Query: 559 RTMELYSSTTRFALAANNSEKIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTE 738
RTME S TTRF L N +IIEP+ SRC+ R+ LSD ++++I KEN+ ++
Sbjct: 165 RTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKKENVKISD 224
Query: 739 EGVSAVVFTAQGDLRSALNNLQSTAQ--GFGHISPDNVFKVCDEPHPMVVRQMLEAXTKQ 912
EG++ +V ++GDLR A+ LQS + G I+ + + + + A
Sbjct: 225 EGIAYLVKVSEGDLRKAITFLQSATRLTGGKEITEKVITDIAGVIPAEKIDGVFAACQSG 284
Query: 913 DIHEAYKVIAKLCKIGYAAEDIVSNIFRV 999
+ V+ L G+AA +V+ + V
Sbjct: 285 SFDKLEAVVKDLIDEGHAATQLVNQLHDV 313
>AF538718-1|AAM97933.1| 363|Homo sapiens replication factor C
(activator 1) 4 (37kD) protein.
Length = 363
Score = 174 bits (424), Expect = 4e-43
Identities = 107/269 (39%), Positives = 149/269 (55%), Gaps = 9/269 (3%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVS-FKDA 396
RP+ D + E V+ L + + PN++ GPPG GKT+TIL AR L G F+
Sbjct: 45 RPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLR 104
Query: 397 VLELNASNDRGIDVVRNKIKMFAQQKVT------LPPGRHKIVILDEADSMTDGAQQALR 558
VLELNAS++RGI VVR K+K FAQ V+ P KIVILDEADSMT AQ ALR
Sbjct: 105 VLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALR 164
Query: 559 RTMELYSSTTRFALAANNSEKIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTE 738
RTME S TTRF L N +IIEP+ SRC+ R+ LSD ++++I KEN+ ++
Sbjct: 165 RTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKKENVKISD 224
Query: 739 EGVSAVVFTAQGDLRSALNNLQSTAQ--GFGHISPDNVFKVCDEPHPMVVRQMLEAXTKQ 912
EG++ +V ++GDLR A+ LQS + G I+ + + + + A
Sbjct: 225 EGIAYLVKVSEGDLRKAITFLQSATRLTGGKEITEKVITDIAGVIPAEKIDGVFAACQSG 284
Query: 913 DIHEAYKVIAKLCKIGYAAEDIVSNIFRV 999
+ V+ L G+AA +V+ + V
Sbjct: 285 SFDKLEAVVKDLIDEGHAATQLVNQLHDV 313
>L07541-1|AAB07268.1| 356|Homo sapiens replication factor C, 38-kDa
subunit protein.
Length = 356
Score = 89.0 bits (211), Expect = 3e-17
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFK--- 390
RP + + ++ ++L + G+ P++++ GP G GK T I+C+ R L GV +
Sbjct: 9 RPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVGVEKLR 68
Query: 391 ---------------------DAVLELNASNDRGID--VVRNKIKMFAQ--QKVTLPPGR 495
+ LE+N S+ D V++ +K AQ Q T
Sbjct: 69 IEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLETNSQRD 128
Query: 496 HKIVILDEADSMTDGAQQALRRTMELYSSTTRFALAANNSEKIIEPIQSRCAVLRYSRLS 675
K+V+L E D +T AQ ALRRTME Y ST R L N++ K+I PI+SRC +R S
Sbjct: 129 FKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPS 188
Query: 676 DAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSAL 792
I + +C KE L+ + + + +LR AL
Sbjct: 189 IEDICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKAL 227
>BT019668-1|AAV38474.1| 356|Homo sapiens replication factor C
(activator 1) 3, 38kDa protein.
Length = 356
Score = 89.0 bits (211), Expect = 3e-17
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFK--- 390
RP + + ++ ++L + G+ P++++ GP G GK T I+C+ R L GV +
Sbjct: 9 RPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVGVEKLR 68
Query: 391 ---------------------DAVLELNASNDRGID--VVRNKIKMFAQ--QKVTLPPGR 495
+ LE+N S+ D V++ +K AQ Q T
Sbjct: 69 IEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLETNSQRD 128
Query: 496 HKIVILDEADSMTDGAQQALRRTMELYSSTTRFALAANNSEKIIEPIQSRCAVLRYSRLS 675
K+V+L E D +T AQ ALRRTME Y ST R L N++ K+I PI+SRC +R S
Sbjct: 129 FKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPS 188
Query: 676 DAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSAL 792
I + +C KE L+ + + + +LR AL
Sbjct: 189 IEDICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKAL 227
>BC000149-1|AAH00149.1| 356|Homo sapiens replication factor C
(activator 1) 3, 38kDa protein.
Length = 356
Score = 89.0 bits (211), Expect = 3e-17
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFK--- 390
RP + + ++ ++L + G+ P++++ GP G GK T I+C+ R L GV +
Sbjct: 9 RPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVGVEKLR 68
Query: 391 ---------------------DAVLELNASNDRGID--VVRNKIKMFAQ--QKVTLPPGR 495
+ LE+N S+ D V++ +K AQ Q T
Sbjct: 69 IEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLETNSQRD 128
Query: 496 HKIVILDEADSMTDGAQQALRRTMELYSSTTRFALAANNSEKIIEPIQSRCAVLRYSRLS 675
K+V+L E D +T AQ ALRRTME Y ST R L N++ K+I PI+SRC +R S
Sbjct: 129 FKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPS 188
Query: 676 DAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSAL 792
I + +C KE L+ + + + +LR AL
Sbjct: 189 IEDICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKAL 227
>AL139081-1|CAH70947.1| 356|Homo sapiens replication factor C
(activator 1) 3, 38kDa protein.
Length = 356
Score = 89.0 bits (211), Expect = 3e-17
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFK--- 390
RP + + ++ ++L + G+ P++++ GP G GK T I+C+ R L GV +
Sbjct: 9 RPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVGVEKLR 68
Query: 391 ---------------------DAVLELNASNDRGID--VVRNKIKMFAQ--QKVTLPPGR 495
+ LE+N S+ D V++ +K AQ Q T
Sbjct: 69 IEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLETNSQRD 128
Query: 496 HKIVILDEADSMTDGAQQALRRTMELYSSTTRFALAANNSEKIIEPIQSRCAVLRYSRLS 675
K+V+L E D +T AQ ALRRTME Y ST R L N++ K+I PI+SRC +R S
Sbjct: 129 FKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPS 188
Query: 676 DAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSAL 792
I + +C KE L+ + + + +LR AL
Sbjct: 189 IEDICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKAL 227
>AF484446-1|AAL82505.1| 356|Homo sapiens replication factor C
(activator 1) 3 (38kD) protein.
Length = 356
Score = 89.0 bits (211), Expect = 3e-17
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFK--- 390
RP + + ++ ++L + G+ P++++ GP G GK T I+C+ R L GV +
Sbjct: 9 RPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVGVEKLR 68
Query: 391 ---------------------DAVLELNASNDRGID--VVRNKIKMFAQ--QKVTLPPGR 495
+ LE+N S+ D V++ +K AQ Q T
Sbjct: 69 IEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLETNSQRD 128
Query: 496 HKIVILDEADSMTDGAQQALRRTMELYSSTTRFALAANNSEKIIEPIQSRCAVLRYSRLS 675
K+V+L E D +T AQ ALRRTME Y ST R L N++ K+I PI+SRC +R S
Sbjct: 129 FKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPS 188
Query: 676 DAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSAL 792
I + +C KE L+ + + + +LR AL
Sbjct: 189 IEDICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKAL 227
>AK222572-1|BAD96292.1| 356|Homo sapiens replication factor C 3
isoform 1 variant protein.
Length = 356
Score = 88.2 bits (209), Expect = 5e-17
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFK--- 390
RP + + ++ ++L + G+ P++++ GP G GK T I+C+ R L GV +
Sbjct: 9 RPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVGVEKLR 68
Query: 391 ---------------------DAVLELNASNDRGID--VVRNKIKMFAQ--QKVTLPPGR 495
+ LE+N S+ D V++ +K AQ Q T
Sbjct: 69 IEHQTTTTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLETNSQRD 128
Query: 496 HKIVILDEADSMTDGAQQALRRTMELYSSTTRFALAANNSEKIIEPIQSRCAVLRYSRLS 675
K+V+L E D +T AQ ALRRTME Y ST R L N++ K+I PI+SRC +R S
Sbjct: 129 FKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPS 188
Query: 676 DAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSAL 792
I + +C KE L+ + + + +LR AL
Sbjct: 189 IEGICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKAL 227
>L23320-1|AAA16121.1| 1148|Homo sapiens replication factor C large
subunit protein.
Length = 1148
Score = 51.6 bits (118), Expect = 5e-06
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 12/176 (6%)
Frame = +1
Query: 310 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVR---------NKIKMF 462
+++GPPGVGKTTT + + LG S+ +ELNAS+ R ++ IK F
Sbjct: 648 LLSGPPGVGKTTTASLVCQE-LGYSY----VELNASDTRSKSSLKAIVAESLNNTSIKGF 702
Query: 463 AQQKVTLPPGRHKIVILDEADSMTDGAQQ-ALRRTMELYSST--TRFALAANNSEKIIEP 633
+I+DE D M + ++ + L T + + + I
Sbjct: 703 YSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRS 762
Query: 634 IQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSALNNL 801
+ C LR+ R QI ++ I KE L ++ ++ A D+R L+NL
Sbjct: 763 LVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNL 818
>BC051786-1|AAH51786.1| 1148|Homo sapiens RFC1 protein protein.
Length = 1148
Score = 51.6 bits (118), Expect = 5e-06
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 12/176 (6%)
Frame = +1
Query: 310 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVR---------NKIKMF 462
+++GPPGVGKTTT + + LG S+ +ELNAS+ R ++ IK F
Sbjct: 648 LLSGPPGVGKTTTASLVCQE-LGYSY----VELNASDTRSKSSLKAIVAESLNNTSIKGF 702
Query: 463 AQQKVTLPPGRHKIVILDEADSMTDGAQQ-ALRRTMELYSST--TRFALAANNSEKIIEP 633
+I+DE D M + ++ + L T + + + I
Sbjct: 703 YSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRS 762
Query: 634 IQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSALNNL 801
+ C LR+ R QI ++ I KE L ++ ++ A D+R L+NL
Sbjct: 763 LVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNL 818
>BC051751-1|AAH51751.1| 1147|Homo sapiens replication factor C
(activator 1) 1, 145kDa protein.
Length = 1147
Score = 51.6 bits (118), Expect = 5e-06
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 12/176 (6%)
Frame = +1
Query: 310 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVR---------NKIKMF 462
+++GPPGVGKTTT + + LG S+ +ELNAS+ R ++ IK F
Sbjct: 647 LLSGPPGVGKTTTASLVCQE-LGYSY----VELNASDTRSKSSLKAIVAESLNNTSIKGF 701
Query: 463 AQQKVTLPPGRHKIVILDEADSMTDGAQQ-ALRRTMELYSST--TRFALAANNSEKIIEP 633
+I+DE D M + ++ + L T + + + I
Sbjct: 702 YSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRS 761
Query: 634 IQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSALNNL 801
+ C LR+ R QI ++ I KE L ++ ++ A D+R L+NL
Sbjct: 762 LVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNL 817
>BC035297-1|AAH35297.1| 1148|Homo sapiens replication factor C
(activator 1) 1, 145kDa protein.
Length = 1148
Score = 51.6 bits (118), Expect = 5e-06
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 12/176 (6%)
Frame = +1
Query: 310 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVR---------NKIKMF 462
+++GPPGVGKTTT + + LG S+ +ELNAS+ R ++ IK F
Sbjct: 648 LLSGPPGVGKTTTASLVCQE-LGYSY----VELNASDTRSKSSLKAIVAESLNNTSIKGF 702
Query: 463 AQQKVTLPPGRHKIVILDEADSMTDGAQQ-ALRRTMELYSST--TRFALAANNSEKIIEP 633
+I+DE D M + ++ + L T + + + I
Sbjct: 703 YSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRS 762
Query: 634 IQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSALNNL 801
+ C LR+ R QI ++ I KE L ++ ++ A D+R L+NL
Sbjct: 763 LVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNL 818
>AY600371-1|AAS94325.1| 1147|Homo sapiens replication factor C
(activator 1) 1, 145kDa protein.
Length = 1147
Score = 51.6 bits (118), Expect = 5e-06
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 12/176 (6%)
Frame = +1
Query: 310 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVR---------NKIKMF 462
+++GPPGVGKTTT + + LG S+ +ELNAS+ R ++ IK F
Sbjct: 647 LLSGPPGVGKTTTASLVCQE-LGYSY----VELNASDTRSKSSLKAIVAESLNNTSIKGF 701
Query: 463 AQQKVTLPPGRHKIVILDEADSMTDGAQQ-ALRRTMELYSST--TRFALAANNSEKIIEP 633
+I+DE D M + ++ + L T + + + I
Sbjct: 702 YSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRS 761
Query: 634 IQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSALNNL 801
+ C LR+ R QI ++ I KE L ++ ++ A D+R L+NL
Sbjct: 762 LVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNL 817
>Z22642-1|CAA80355.1| 1147|Homo sapiens PO-GA protein.
Length = 1147
Score = 49.6 bits (113), Expect = 2e-05
Identities = 45/176 (25%), Positives = 74/176 (42%), Gaps = 12/176 (6%)
Frame = +1
Query: 310 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVR---------NKIKMF 462
+++GPPGVGKTTT + + LG S+ +ELN S+ R ++ IK F
Sbjct: 647 LLSGPPGVGKTTTASLVCQE-LGYSY----VELNRSDTRSKSSLKAIVAESLNNTSIKGF 701
Query: 463 AQQKVTLPPGRHKIVILDEADSMTDGAQQ-ALRRTMELYSST--TRFALAANNSEKIIEP 633
+I+DE D M + ++ + L T + + + I
Sbjct: 702 YSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRS 761
Query: 634 IQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSALNNL 801
+ C LR+ R QI ++ I KE L ++ ++ A D+R L+NL
Sbjct: 762 LVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNL 817
>AF040250-1|AAB99788.1| 1147|Homo sapiens DNA binding protein protein.
Length = 1147
Score = 49.6 bits (113), Expect = 2e-05
Identities = 45/176 (25%), Positives = 74/176 (42%), Gaps = 12/176 (6%)
Frame = +1
Query: 310 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVR---------NKIKMF 462
+++GPPGVGKTTT + + LG S+ +ELN S+ R ++ IK F
Sbjct: 647 LLSGPPGVGKTTTASLVCQE-LGYSY----VELNRSDTRSKSSLKAIVAESLNNTSIKGF 701
Query: 463 AQQKVTLPPGRHKIVILDEADSMTDGAQQ-ALRRTMELYSST--TRFALAANNSEKIIEP 633
+I+DE D M + ++ + L T + + + I
Sbjct: 702 YSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRS 761
Query: 634 IQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSALNNL 801
+ C LR+ R QI ++ I KE L ++ ++ A D+R L+NL
Sbjct: 762 LVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNL 817
>AL139092-4|CAH73665.1| 445|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 445
Score = 48.8 bits (111), Expect = 4e-05
Identities = 45/156 (28%), Positives = 68/156 (43%), Gaps = 5/156 (3%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFK 390
RP T G V + L +T P++I+ GPPG GKTT LA + S K
Sbjct: 12 RPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTT----LAHIIASNSKK 67
Query: 391 DAV--LELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRT 564
++ + L+A+N + D VR+ IK +K R I+ +DE Q
Sbjct: 68 HSIRFVTLSATNAKTND-VRDVIKQAQNEKSFFK--RKTILFIDEIHRFNKSQQDTFLPH 124
Query: 565 MELYSSTTRFALAANNSEKIIEPIQSRCAVLRYSRL 672
+E + T A N S ++ + SRC V+ +L
Sbjct: 125 VECGTITLIGATTENPSFQVNAALLSRCRVIVLEKL 160
>AL139092-3|CAH73664.1| 665|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 665
Score = 48.8 bits (111), Expect = 4e-05
Identities = 45/156 (28%), Positives = 68/156 (43%), Gaps = 5/156 (3%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFK 390
RP T G V + L +T P++I+ GPPG GKTT LA + S K
Sbjct: 232 RPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTT----LAHIIASNSKK 287
Query: 391 DAV--LELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRT 564
++ + L+A+N + D VR+ IK +K R I+ +DE Q
Sbjct: 288 HSIRFVTLSATNAKTND-VRDVIKQAQNEKSFFK--RKTILFIDEIHRFNKSQQDTFLPH 344
Query: 565 MELYSSTTRFALAANNSEKIIEPIQSRCAVLRYSRL 672
+E + T A N S ++ + SRC V+ +L
Sbjct: 345 VECGTITLIGATTENPSFQVNAALLSRCRVIVLEKL 380
>AK223593-1|BAD97313.1| 665|Homo sapiens Werner helicase
interacting protein isoform 1 variant protein.
Length = 665
Score = 48.8 bits (111), Expect = 4e-05
Identities = 45/156 (28%), Positives = 68/156 (43%), Gaps = 5/156 (3%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFK 390
RP T G V + L +T P++I+ GPPG GKTT LA + S K
Sbjct: 232 RPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTT----LAHIIASNSKK 287
Query: 391 DAV--LELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRT 564
++ + L+A+N + D VR+ IK +K R I+ +DE Q
Sbjct: 288 HSIRFVTLSATNAKTND-VRDVIKQAQNEKSFFK--RKTILFIDEIHRFNKSQQDTFLPH 344
Query: 565 MELYSSTTRFALAANNSEKIIEPIQSRCAVLRYSRL 672
+E + T A N S ++ + SRC V+ +L
Sbjct: 345 VECGTITLIGATTENPSFQVNAALLSRCRVIVLEKL 380
>AF218313-1|AAF80563.1| 445|Homo sapiens putative helicase RUVBL
protein.
Length = 445
Score = 48.8 bits (111), Expect = 4e-05
Identities = 45/156 (28%), Positives = 68/156 (43%), Gaps = 5/156 (3%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFK 390
RP T G V + L +T P++I+ GPPG GKTT LA + S K
Sbjct: 12 RPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTT----LAHIIASNSKK 67
Query: 391 DAV--LELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRT 564
++ + L+A+N + D VR+ IK +K R I+ +DE Q
Sbjct: 68 HSIRFVTLSATNAKTND-VRDVIKQAQNEKSFFK--RKTILFIDEIHRFNKSQQDTFLPH 124
Query: 565 MELYSSTTRFALAANNSEKIIEPIQSRCAVLRYSRL 672
+E + T A N S ++ + SRC V+ +L
Sbjct: 125 VECGTITLIGATTENPSFQVNAALLSRCRVIVLEKL 160
>AB209723-1|BAD92960.1| 646|Homo sapiens Werner helicase
interacting protein isoform 1 variant protein.
Length = 646
Score = 48.8 bits (111), Expect = 4e-05
Identities = 45/156 (28%), Positives = 68/156 (43%), Gaps = 5/156 (3%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFK 390
RP T G V + L +T P++I+ GPPG GKTT LA + S K
Sbjct: 213 RPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTT----LAHIIASNSKK 268
Query: 391 DAV--LELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRT 564
++ + L+A+N + D VR+ IK +K R I+ +DE Q
Sbjct: 269 HSIRFVTLSATNAKTND-VRDVIKQAQNEKSFFK--RKTILFIDEIHRFNKSQQDTFLPH 325
Query: 565 MELYSSTTRFALAANNSEKIIEPIQSRCAVLRYSRL 672
+E + T A N S ++ + SRC V+ +L
Sbjct: 326 VECGTITLIGATTENPSFQVNAALLSRCRVIVLEKL 361
>BC018184-1|AAH18184.1| 975|Homo sapiens CTF18, chromosome
transmission fidelity factor 18 homolog (S. cerevisiae)
protein.
Length = 975
Score = 46.4 bits (105), Expect = 2e-04
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +1
Query: 310 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTL-P 486
++ GPPG+GKTT +AR G S V+E+NAS+DR +V R +I+ Q + L
Sbjct: 371 LLCGPPGLGKTTLAHVIARHA-GYS----VVEMNASDDRSPEVFRTRIEAATQMESVLGA 425
Query: 487 PGRHKIVILDEAD 525
G+ +++DE D
Sbjct: 426 GGKPNCLVIDEID 438
>BC006437-1|AAH06437.1| 1016|Homo sapiens CHTF18 protein protein.
Length = 1016
Score = 46.4 bits (105), Expect = 2e-04
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +1
Query: 310 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTL-P 486
++ GPPG+GKTT +AR G S V+E+NAS+DR +V R +I+ Q + L
Sbjct: 412 LLCGPPGLGKTTLAHVIARHA-GYS----VVEMNASDDRSPEVFRTRIEAATQMESVLGA 466
Query: 487 PGRHKIVILDEAD 525
G+ +++DE D
Sbjct: 467 GGKPNCLVIDEID 479
>BC006278-1|AAH06278.2| 975|Homo sapiens CTF18, chromosome
transmission fidelity factor 18 homolog (S. cerevisiae)
protein.
Length = 975
Score = 46.4 bits (105), Expect = 2e-04
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +1
Query: 310 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTL-P 486
++ GPPG+GKTT +AR G S V+E+NAS+DR +V R +I+ Q + L
Sbjct: 371 LLCGPPGLGKTTLAHVIARHA-GYS----VVEMNASDDRSPEVFRTRIEAATQMESVLGA 425
Query: 487 PGRHKIVILDEAD 525
G+ +++DE D
Sbjct: 426 GGKPNCLVIDEID 438
>AL031033-2|CAB53056.1| 260|Homo sapiens protein ( Human DNA
sequence from clone LA16c-321D2 on chromosome 16
Contains a gene for a Ribosomal Large Subunit
Pseudouridine Synthase (EC ).
Length = 260
Score = 46.4 bits (105), Expect = 2e-04
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +1
Query: 310 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTL-P 486
++ GPPG+GKTT +AR G S V+E+NAS+DR +V R +I+ Q + L
Sbjct: 93 LLCGPPGLGKTTLAHVIARHA-GYS----VVEMNASDDRSPEVFRTRIEAATQMESVLGA 147
Query: 487 PGRHKIVILDEAD 525
G+ +++DE D
Sbjct: 148 GGKPNCLVIDEID 160
>AE006465-2|AAK61256.1| 1184|Homo sapiens some homology with
holliday junction DNA helicase RUVB like protein.
Length = 1184
Score = 46.4 bits (105), Expect = 2e-04
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +1
Query: 310 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTL-P 486
++ GPPG+GKTT +AR G S V+E+NAS+DR +V R +I+ Q + L
Sbjct: 566 LLCGPPGLGKTTLAHVIARHA-GYS----VVEMNASDDRSPEVFRTRIEAATQMESVLGA 620
Query: 487 PGRHKIVILDEAD 525
G+ +++DE D
Sbjct: 621 GGKPNCLVIDEID 633
>AB056152-1|BAB60709.1| 665|Homo sapiens Werner helicase
interacting protein protein.
Length = 665
Score = 46.0 bits (104), Expect = 3e-04
Identities = 44/156 (28%), Positives = 67/156 (42%), Gaps = 5/156 (3%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFK 390
RP T G V + L +T P++ + GPPG GKTT LA + S K
Sbjct: 232 RPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLNLWGPPGCGKTT----LAHIIASNSKK 287
Query: 391 DAV--LELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRT 564
++ + L+A+N + D VR+ IK +K R I+ +DE Q
Sbjct: 288 HSIRFVTLSATNAKTND-VRDVIKQAQNEKSFFK--RKTILFIDEIHRFNKSQQDTFLPH 344
Query: 565 MELYSSTTRFALAANNSEKIIEPIQSRCAVLRYSRL 672
+E + T A N S ++ + SRC V+ +L
Sbjct: 345 VECGTITLIGATTENPSFQVNAALLSRCRVIVLEKL 380
>BC018923-1|AAH18923.1| 640|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 640
Score = 41.1 bits (92), Expect = 0.008
Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 7/202 (3%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFK 390
RP T G V + L +T P++I+ GPPG GKTT LA + S K
Sbjct: 232 RPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTT----LAHIIASNSKK 287
Query: 391 DAV--LELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRT 564
++ + L+A+N + D VR+ IK +K R I+ +DE + +QQ
Sbjct: 288 HSIRFVTLSATNAKTND-VRDVIKQAQNEKSFFK--RKTILFIDEIHRF-NKSQQVNAAL 343
Query: 565 MELYSSTTRFALAANNSEKII-EPIQS-RCAVLRYSRLSDAQILAKVIEICNKENLSYTE 738
+ L I+ I S VL SR +D L+ ++ + +
Sbjct: 344 LSRCRVIVLEKLPVEAMVTILMRAINSLGIHVLDSSRPTDP--LSHSSNSSSEPAMFIED 401
Query: 739 EGVSAVVFTAQGDLRSALNNLQ 804
+ V + + + GD R+ LN LQ
Sbjct: 402 KAVDTLAYLSDGDARAGLNGLQ 423
>AL139092-2|CAH73663.1| 640|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 640
Score = 41.1 bits (92), Expect = 0.008
Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 7/202 (3%)
Frame = +1
Query: 220 RPQTFDXIVGNEXTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFK 390
RP T G V + L +T P++I+ GPPG GKTT LA + S K
Sbjct: 232 RPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTT----LAHIIASNSKK 287
Query: 391 DAV--LELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRT 564
++ + L+A+N + D VR+ IK +K R I+ +DE + +QQ
Sbjct: 288 HSIRFVTLSATNAKTND-VRDVIKQAQNEKSFFK--RKTILFIDEIHRF-NKSQQVNAAL 343
Query: 565 MELYSSTTRFALAANNSEKII-EPIQS-RCAVLRYSRLSDAQILAKVIEICNKENLSYTE 738
+ L I+ I S VL SR +D L+ ++ + +
Sbjct: 344 LSRCRVIVLEKLPVEAMVTILMRAINSLGIHVLDSSRPTDP--LSHSSNSSSEPAMFIED 401
Query: 739 EGVSAVVFTAQGDLRSALNNLQ 804
+ V + + + GD R+ LN LQ
Sbjct: 402 KAVDTLAYLSDGDARAGLNGLQ 423
>BC051867-1|AAH51867.1| 674|Homo sapiens fidgetin-like 1 protein.
Length = 674
Score = 37.1 bits (82), Expect = 0.12
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Frame = +1
Query: 292 GNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNAS-NDRGIDVVRNKIKMFAQ 468
G I++ GPPG GKT C+A F + L + G +VR +FA
Sbjct: 432 GPPKGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVR---ALFAV 488
Query: 469 QKVTLPPGRHKIVILDEADSMT----DGAQQALRR-----TMELYSSTT----RFAL--A 603
+ P ++ +DE DS+ DG ++ RR ++L +TT R + A
Sbjct: 489 ARCQQP----AVIFIDEIDSLLSQRGDGEHESSRRIKTEFLVQLDGATTSSEDRILVVGA 544
Query: 604 ANNSEKIIEPIQSRCAVLRYSRLSDAQILAK-VIEICNKENLSYTEEGVSAVV 759
N ++I E + R Y L +A + VI + +KE +EE + +V
Sbjct: 545 TNRPQEIDEAARRRLVKRLYIPLPEASARKQIVINLMSKEQCCLSEEEIEQIV 597
>BC027856-1|AAH27856.1| 674|Homo sapiens FIGNL1 protein protein.
Length = 674
Score = 37.1 bits (82), Expect = 0.12
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Frame = +1
Query: 292 GNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNAS-NDRGIDVVRNKIKMFAQ 468
G I++ GPPG GKT C+A F + L + G +VR +FA
Sbjct: 432 GPPKGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVR---ALFAV 488
Query: 469 QKVTLPPGRHKIVILDEADSMT----DGAQQALRR-----TMELYSSTT----RFAL--A 603
+ P ++ +DE DS+ DG ++ RR ++L +TT R + A
Sbjct: 489 ARCQQP----AVIFIDEIDSLLSQRGDGEHESSRRIKTEFLVQLDGATTSSEDRILVVGA 544
Query: 604 ANNSEKIIEPIQSRCAVLRYSRLSDAQILAK-VIEICNKENLSYTEEGVSAVV 759
N ++I E + R Y L +A + VI + +KE +EE + +V
Sbjct: 545 TNRPQEIDEAARRRLVKRLYIPLPEASARKQIVINLMSKEQCCLSEEEIEQIV 597
>AK023411-1|BAB14567.1| 254|Homo sapiens protein ( Homo sapiens
cDNA FLJ13349 fis, clone OVARC1002138, moderately
similar to SAP1 PROTEIN. ).
Length = 254
Score = 37.1 bits (82), Expect = 0.12
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Frame = +1
Query: 292 GNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNAS-NDRGIDVVRNKIKMFAQ 468
G I++ GPPG GKT C+A F + L + G +VR +FA
Sbjct: 12 GPPKGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVR---ALFAV 68
Query: 469 QKVTLPPGRHKIVILDEADSMT----DGAQQALRR-----TMELYSSTT----RFAL--A 603
+ P ++ +DE DS+ DG ++ RR ++L +TT R + A
Sbjct: 69 ARCQQP----AVIFIDEIDSLLSQRGDGEHESSRRIKTEFLVQLDGATTSSEDRILVVGA 124
Query: 604 ANNSEKIIEPIQSRCAVLRYSRLSDAQILAK-VIEICNKENLSYTEEGVSAVV 759
N ++I E + R Y L +A + VI + +KE +EE + +V
Sbjct: 125 TNRPQEIDEAARRRLVKRLYIPLPEASARKQIVINLMSKEQCCLSEEEIEQIV 177
>AK023142-1|BAB14426.1| 674|Homo sapiens protein ( Homo sapiens
cDNA FLJ13080 fis, clone NT2RP3002007, weakly similar to
SAP1 PROTEIN. ).
Length = 674
Score = 37.1 bits (82), Expect = 0.12
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Frame = +1
Query: 292 GNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNAS-NDRGIDVVRNKIKMFAQ 468
G I++ GPPG GKT C+A F + L + G +VR +FA
Sbjct: 432 GPPKGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVR---ALFAV 488
Query: 469 QKVTLPPGRHKIVILDEADSMT----DGAQQALRR-----TMELYSSTT----RFAL--A 603
+ P ++ +DE DS+ DG ++ RR ++L +TT R + A
Sbjct: 489 ARCQQP----AVIFIDEIDSLLSQRGDGEHESSRRIKTEFLVQLDGATTSSEDRILVVGA 544
Query: 604 ANNSEKIIEPIQSRCAVLRYSRLSDAQILAK-VIEICNKENLSYTEEGVSAVV 759
N ++I E + R Y L +A + VI + +KE +EE + +V
Sbjct: 545 TNRPQEIDEAARRRLVKRLYIPLPEASARKQIVINLMSKEQCCLSEEEIEQIV 597
>AC018705-1|AAS01996.1| 674|Homo sapiens unknown protein.
Length = 674
Score = 37.1 bits (82), Expect = 0.12
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Frame = +1
Query: 292 GNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNAS-NDRGIDVVRNKIKMFAQ 468
G I++ GPPG GKT C+A F + L + G +VR +FA
Sbjct: 432 GPPKGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVR---ALFAV 488
Query: 469 QKVTLPPGRHKIVILDEADSMT----DGAQQALRR-----TMELYSSTT----RFAL--A 603
+ P ++ +DE DS+ DG ++ RR ++L +TT R + A
Sbjct: 489 ARCQQP----AVIFIDEIDSLLSQRGDGEHESSRRIKTEFLVQLDGATTSSEDRILVVGA 544
Query: 604 ANNSEKIIEPIQSRCAVLRYSRLSDAQILAK-VIEICNKENLSYTEEGVSAVV 759
N ++I E + R Y L +A + VI + +KE +EE + +V
Sbjct: 545 TNRPQEIDEAARRRLVKRLYIPLPEASARKQIVINLMSKEQCCLSEEEIEQIV 597
>AY557611-1|AAT52049.1| 1844|Homo sapiens chromosome fragility
associated gene 1 protein.
Length = 1844
Score = 32.7 bits (71), Expect = 2.7
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +1
Query: 307 IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQ 468
++I GP GVGKT + A+ L FK + E+NAS+ R + +++K Q
Sbjct: 1128 VLITGPTGVGKTAAVYACAQEL---GFK--IFEVNASSQRSGRQILSQLKEATQ 1176
>AK022797-1|BAB14248.1| 801|Homo sapiens protein ( Homo sapiens
cDNA FLJ12735 fis, clone NT2RP2000258, weakly similar to
ACTIVATOR 1 140 KD SUBUNIT. ).
Length = 801
Score = 32.7 bits (71), Expect = 2.7
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +1
Query: 307 IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQ 468
++I GP GVGKT + A+ L FK + E+NAS+ R + +++K Q
Sbjct: 725 VLITGPTGVGKTAAVYACAQEL---GFK--IFEVNASSQRSGRQILSQLKEATQ 773
>AJ314648-1|CAC44537.2| 1844|Homo sapiens ATP(GTP)-binding protein
protein.
Length = 1844
Score = 32.7 bits (71), Expect = 2.7
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +1
Query: 307 IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQ 468
++I GP GVGKT + A+ L FK + E+NAS+ R + +++K Q
Sbjct: 1128 VLITGPTGVGKTAAVYACAQEL---GFK--IFEVNASSQRSGRQILSQLKEATQ 1176
>D42046-1|BAA07647.1| 1077|Homo sapiens KIAA0083 protein.
Length = 1077
Score = 31.5 bits (68), Expect = 6.1
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +1
Query: 310 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMF 462
+I G PG GKTTTI L R L F +VL L + +D + K+ F
Sbjct: 662 LIVGMPGTGKTTTICTLVRILYACGF--SVL-LTSYTHSAVDNILLKLAKF 709
>BC053574-1|AAH53574.1| 494|Homo sapiens DNA2L protein protein.
Length = 494
Score = 31.5 bits (68), Expect = 6.1
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +1
Query: 310 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMF 462
+I G PG GKTTTI L R L F +VL L + +D + K+ F
Sbjct: 79 LIVGMPGTGKTTTICTLVRILYACGF--SVL-LTSYTHSAVDNILLKLAKF 126
>BC050576-1|AAH50576.1| 479|Homo sapiens chromosome 9 open reading
frame 98 protein.
Length = 479
Score = 31.5 bits (68), Expect = 6.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 295 NAPNIIIAGPPGVGKTTTILCLARAL 372
N P I+I GPP GKTT + L + L
Sbjct: 56 NVPRIVILGPPASGKTTIAMWLCKHL 81
>BC041115-1|AAH41115.1| 435|Homo sapiens DNA2L protein protein.
Length = 435
Score = 31.5 bits (68), Expect = 6.1
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +1
Query: 310 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMF 462
+I G PG GKTTTI L R L F +VL L + +D + K+ F
Sbjct: 20 LIVGMPGTGKTTTICTLVRILYACGF--SVL-LTSYTHSAVDNILLKLAKF 67
>BC034776-1|AAH34776.1| 479|Homo sapiens chromosome 9 open reading
frame 98 protein.
Length = 479
Score = 31.5 bits (68), Expect = 6.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 295 NAPNIIIAGPPGVGKTTTILCLARAL 372
N P I+I GPP GKTT + L + L
Sbjct: 56 NVPRIVILGPPASGKTTIAMWLCKHL 81
>AY364261-1|AAQ76820.1| 310|Homo sapiens hypothetical protein
protein.
Length = 310
Score = 31.5 bits (68), Expect = 6.1
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 313 IAGPPGVGKTTTILCLARALLGVSFKDAVLELNASND 423
+ GPPG GKTT L ++ L + + AV+ L+ +N+
Sbjct: 14 VTGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANE 50
>AY072792-1|AAL68396.1| 994|Homo sapiens PAAD and NACHT-containing
protein 2 protein.
Length = 994
Score = 31.5 bits (68), Expect = 6.1
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 262 VSRLAVFAKTGNAPN-IIIAGPPGVGKTTTILCLARA 369
+ RL +TG P +II GP G+GKTT ++ L A
Sbjct: 135 LDRLFAPKETGKQPRTVIIQGPQGIGKTTLLMKLMMA 171
>AL445645-1|CAH72109.1| 479|Homo sapiens chromosome 9 open reading
frame 98 protein.
Length = 479
Score = 31.5 bits (68), Expect = 6.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 295 NAPNIIIAGPPGVGKTTTILCLARAL 372
N P I+I GPP GKTT + L + L
Sbjct: 56 NVPRIVILGPPASGKTTIAMWLCKHL 81
>AL160165-5|CAH70535.1| 479|Homo sapiens chromosome 9 open reading
frame 98 protein.
Length = 479
Score = 31.5 bits (68), Expect = 6.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 295 NAPNIIIAGPPGVGKTTTILCLARAL 372
N P I+I GPP GKTT + L + L
Sbjct: 56 NVPRIVILGPPASGKTTIAMWLCKHL 81
>AL136233-5|CAI17238.1| 1040|Homo sapiens DNA2 DNA replication
helicase 2-like (yeast) protein.
Length = 1040
Score = 31.5 bits (68), Expect = 6.1
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +1
Query: 310 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMF 462
+I G PG GKTTTI L R L F +VL L + +D + K+ F
Sbjct: 645 LIVGMPGTGKTTTICTLVRILYACGF--SVL-LTSYTHSAVDNILLKLAKF 692
>AK057266-1|BAB71402.1| 479|Homo sapiens protein ( Homo sapiens
cDNA FLJ32704 fis, clone TESTI2000591, weakly similar to
ADENYLATE KINASE, CHLOROPLAST (EC 2.7.4.3). ).
Length = 479
Score = 31.5 bits (68), Expect = 6.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 295 NAPNIIIAGPPGVGKTTTILCLARAL 372
N P I+I GPP GKTT + L + L
Sbjct: 56 NVPRIVILGPPASGKTTIAMWLCKHL 81
>AK056688-1|BAB71254.1| 919|Homo sapiens protein ( Homo sapiens
cDNA FLJ32126 fis, clone PEBLM2000112, weakly similar to
Homo sapiens nucleotide-binding site protein 1 mRNA. ).
Length = 919
Score = 31.5 bits (68), Expect = 6.1
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 262 VSRLAVFAKTGNAPN-IIIAGPPGVGKTTTILCLARA 369
+ RL +TG P +II GP G+GKTT ++ L A
Sbjct: 60 LDRLFAPKETGKQPRTVIIQGPQGIGKTTLLMKLMMA 96
>AK022348-1|BAB14017.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ12286 fis, clone MAMMA1001768, weakly similar to
CELL DIVISION CYCLE PROTEIN 48 HOMOLOG MJ1156. ).
Length = 392
Score = 31.5 bits (68), Expect = 6.1
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +1
Query: 307 IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLP 486
+++AGPPGVGKT + +AR G AV R + N ++F + +
Sbjct: 237 VLLAGPPGVGKTQLVQAVARG-AGAELL-AVSAPALQGSRPGETEENVRRVFQRARELAS 294
Query: 487 PGRHKIVILDEADSM 531
G ++ LDE D++
Sbjct: 295 RG-PSLLFLDEMDAL 308
>AK001211-1|BAA91556.1| 310|Homo sapiens protein ( Homo sapiens
cDNA FLJ10349 fis, clone NT2RM2001100. ).
Length = 310
Score = 31.5 bits (68), Expect = 6.1
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 313 IAGPPGVGKTTTILCLARALLGVSFKDAVLELNASND 423
+ GPPG GKTT L ++ L + + AV+ L+ +N+
Sbjct: 14 VTGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANE 50
>AF482706-1|AAL88672.1| 916|Homo sapiens ribonuclease inhibitor 2
protein.
Length = 916
Score = 31.5 bits (68), Expect = 6.1
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 262 VSRLAVFAKTGNAPN-IIIAGPPGVGKTTTILCLARA 369
+ RL +TG P +II GP G+GKTT ++ L A
Sbjct: 57 LDRLFAPKETGKQPRTVIIQGPQGIGKTTLLMKLMMA 93
>AF479747-1|AAL87104.1| 994|Homo sapiens PYRIN-containing
APAF1-like protein 4 protein.
Length = 994
Score = 31.5 bits (68), Expect = 6.1
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 262 VSRLAVFAKTGNAPN-IIIAGPPGVGKTTTILCLARA 369
+ RL +TG P +II GP G+GKTT ++ L A
Sbjct: 135 LDRLFAPKETGKQPRTVIIQGPQGIGKTTLLMKLMMA 171
>AF442488-1|AAL35293.1| 994|Homo sapiens NALP4 protein.
Length = 994
Score = 31.5 bits (68), Expect = 6.1
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 262 VSRLAVFAKTGNAPN-IIIAGPPGVGKTTTILCLARA 369
+ RL +TG P +II GP G+GKTT ++ L A
Sbjct: 135 LDRLFAPKETGKQPRTVIIQGPQGIGKTTLLMKLMMA 171
>BC008634-1|AAH08634.1| 310|Homo sapiens ATP binding domain 1
family, member B protein.
Length = 310
Score = 31.1 bits (67), Expect = 8.1
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 313 IAGPPGVGKTTTILCLARALLGVSFKDAVLELNASND 423
+ GPPG GKTT L ++ L + + AV+ L+ +N+
Sbjct: 14 VIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANE 50
>BC007815-1|AAH07815.1| 310|Homo sapiens ATP binding domain 1
family, member B protein.
Length = 310
Score = 31.1 bits (67), Expect = 8.1
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 313 IAGPPGVGKTTTILCLARALLGVSFKDAVLELNASND 423
+ GPPG GKTT L ++ L + + AV+ L+ +N+
Sbjct: 14 VIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANE 50
>BC000981-1|AAH00981.1| 753|Homo sapiens spermatogenesis associated
5-like 1 protein.
Length = 753
Score = 31.1 bits (67), Expect = 8.1
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +1
Query: 307 IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLP 486
+++AGPPGVGKT + +AR G AV R + N ++F + +
Sbjct: 237 VLLAGPPGVGKTQLVQAVARE-AGAELL-AVSAPALQGSRPGETEENVRRVFQRARELAS 294
Query: 487 PGRHKIVILDEADSM 531
G ++ LDE D++
Sbjct: 295 RG-PSLLFLDEMDAL 308
>AY358864-1|AAQ89223.1| 310|Homo sapiens AGAA5828 protein.
Length = 310
Score = 31.1 bits (67), Expect = 8.1
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 313 IAGPPGVGKTTTILCLARALLGVSFKDAVLELNASND 423
+ GPPG GKTT L ++ L + + AV+ L+ +N+
Sbjct: 14 VIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANE 50
>AL034380-4|CAB92117.1| 310|Homo sapiens novel protein protein.
Length = 310
Score = 31.1 bits (67), Expect = 8.1
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 313 IAGPPGVGKTTTILCLARALLGVSFKDAVLELNASND 423
+ GPPG GKTT L ++ L + + AV+ L+ +N+
Sbjct: 14 VIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANE 50
>AL034380-3|CAI21619.1| 172|Homo sapiens novel protein protein.
Length = 172
Score = 31.1 bits (67), Expect = 8.1
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 313 IAGPPGVGKTTTILCLARALLGVSFKDAVLELNASND 423
+ GPPG GKTT L ++ L + + AV+ L+ +N+
Sbjct: 14 VIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANE 50
>AK023232-1|BAB14482.1| 620|Homo sapiens protein ( Homo sapiens
cDNA FLJ13170 fis, clone NT2RP3003809, weakly similar to
SAV PROTEIN. ).
Length = 620
Score = 31.1 bits (67), Expect = 8.1
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +1
Query: 307 IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLP 486
+++AGPPGVGKT + +AR G AV R + N ++F + +
Sbjct: 237 VLLAGPPGVGKTQLVQAVARE-AGAELL-AVSAPALQGSRPGETEENVRRVFQRARELAS 294
Query: 487 PGRHKIVILDEADSM 531
G ++ LDE D++
Sbjct: 295 RG-PSLLFLDEMDAL 308
>AK022535-1|BAB14084.1| 310|Homo sapiens protein ( Homo sapiens
cDNA FLJ12473 fis, clone NT2RM1000924, weakly similar to
HYPOTHETICAL 39.7 KD PROTEIN C34E10.2 IN CHROMOSOME III.
).
Length = 310
Score = 31.1 bits (67), Expect = 8.1
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 313 IAGPPGVGKTTTILCLARALLGVSFKDAVLELNASND 423
+ GPPG GKTT L ++ L + + AV+ L+ +N+
Sbjct: 14 VIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANE 50
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,006,980
Number of Sequences: 237096
Number of extensions: 2898431
Number of successful extensions: 6951
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 6487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6922
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16513869000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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