Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_H24
         (1154 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L13690-1|AAA28875.1|  246|Drosophila melanogaster ribosomal prot...   358   7e-99
BT024258-1|ABC86320.1|  253|Drosophila melanogaster IP15838p pro...   358   7e-99
AY118971-1|AAM50831.1|  246|Drosophila melanogaster LD47488p pro...   358   7e-99
AE014297-3319|AAF56129.1|  246|Drosophila melanogaster CG6779-PA...   358   7e-99
X72921-1|CAA51425.1|  246|Drosophila melanogaster ribosomal prot...   351   1e-96
AJ238847-1|CAB52798.1| 1301|Drosophila melanogaster drosophila d...    34   0.32 
AF132179-1|AAD34767.1| 1301|Drosophila melanogaster unknown prot...    34   0.32 
AE013599-2691|AAM68451.1| 1301|Drosophila melanogaster CG5170-PF...    34   0.32 
AE013599-2690|AAM68450.1| 1301|Drosophila melanogaster CG5170-PE...    34   0.32 
AE013599-2689|AAM68449.1| 1301|Drosophila melanogaster CG5170-PD...    34   0.32 
AE013599-2688|AAF57691.2| 1301|Drosophila melanogaster CG5170-PC...    34   0.32 
AE013599-2687|AAS64810.1| 1301|Drosophila melanogaster CG5170-PB...    34   0.32 
AE013599-2686|AAS64809.1| 1301|Drosophila melanogaster CG5170-PA...    34   0.32 
AE014298-2726|AAF48847.1|  494|Drosophila melanogaster CG15046-P...    33   0.98 

>L13690-1|AAA28875.1|  246|Drosophila melanogaster ribosomal protein
           S3/AP endonucleaseDNA repair protein protein.
          Length = 246

 Score =  358 bits (881), Expect = 7e-99
 Identities = 173/223 (77%), Positives = 191/223 (85%)
 Frame = +1

Query: 79  LSKXRKFVGXGVFKAELNXFLTXXLAEXGXSGVEVRVTPIRSEXIIMATRXQSVLGEKGR 258
           +SK RKFV  G+FKAELN FLT  LAE G SGVEVRVTP R+E IIMAT+ Q VLGEKGR
Sbjct: 7   ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66

Query: 259 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 438
           RIRELT++VQKRFN     +ELYAEKVA RGLCAIAQAESLRYKL GGLAVRRACYGVLR
Sbjct: 67  RIRELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLR 126

Query: 439 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 618
           +IMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV TATRHVLLRQGVLGI
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186

Query: 619 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVR 747
           KVK+MLP+D + K GPKKP PD++ V EPK+E +   P +E +
Sbjct: 187 KVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYK 229


>BT024258-1|ABC86320.1|  253|Drosophila melanogaster IP15838p
           protein.
          Length = 253

 Score =  358 bits (881), Expect = 7e-99
 Identities = 173/223 (77%), Positives = 191/223 (85%)
 Frame = +1

Query: 79  LSKXRKFVGXGVFKAELNXFLTXXLAEXGXSGVEVRVTPIRSEXIIMATRXQSVLGEKGR 258
           +SK RKFV  G+FKAELN FLT  LAE G SGVEVRVTP R+E IIMAT+ Q VLGEKGR
Sbjct: 14  ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 73

Query: 259 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 438
           RIRELT++VQKRFN     +ELYAEKVA RGLCAIAQAESLRYKL GGLAVRRACYGVLR
Sbjct: 74  RIRELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLR 133

Query: 439 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 618
           +IMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV TATRHVLLRQGVLGI
Sbjct: 134 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 193

Query: 619 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVR 747
           KVK+MLP+D + K GPKKP PD++ V EPK+E +   P +E +
Sbjct: 194 KVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYK 236


>AY118971-1|AAM50831.1|  246|Drosophila melanogaster LD47488p
           protein.
          Length = 246

 Score =  358 bits (881), Expect = 7e-99
 Identities = 173/223 (77%), Positives = 191/223 (85%)
 Frame = +1

Query: 79  LSKXRKFVGXGVFKAELNXFLTXXLAEXGXSGVEVRVTPIRSEXIIMATRXQSVLGEKGR 258
           +SK RKFV  G+FKAELN FLT  LAE G SGVEVRVTP R+E IIMAT+ Q VLGEKGR
Sbjct: 7   ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66

Query: 259 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 438
           RIRELT++VQKRFN     +ELYAEKVA RGLCAIAQAESLRYKL GGLAVRRACYGVLR
Sbjct: 67  RIRELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLR 126

Query: 439 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 618
           +IMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV TATRHVLLRQGVLGI
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186

Query: 619 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVR 747
           KVK+MLP+D + K GPKKP PD++ V EPK+E +   P +E +
Sbjct: 187 KVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYK 229


>AE014297-3319|AAF56129.1|  246|Drosophila melanogaster CG6779-PA
           protein.
          Length = 246

 Score =  358 bits (881), Expect = 7e-99
 Identities = 173/223 (77%), Positives = 191/223 (85%)
 Frame = +1

Query: 79  LSKXRKFVGXGVFKAELNXFLTXXLAEXGXSGVEVRVTPIRSEXIIMATRXQSVLGEKGR 258
           +SK RKFV  G+FKAELN FLT  LAE G SGVEVRVTP R+E IIMAT+ Q VLGEKGR
Sbjct: 7   ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66

Query: 259 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 438
           RIRELT++VQKRFN     +ELYAEKVA RGLCAIAQAESLRYKL GGLAVRRACYGVLR
Sbjct: 67  RIRELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLR 126

Query: 439 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 618
           +IMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV TATRHVLLRQGVLGI
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186

Query: 619 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVR 747
           KVK+MLP+D + K GPKKP PD++ V EPK+E +   P +E +
Sbjct: 187 KVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYK 229


>X72921-1|CAA51425.1|  246|Drosophila melanogaster ribosomal protein
           S3 protein.
          Length = 246

 Score =  351 bits (862), Expect = 1e-96
 Identities = 170/223 (76%), Positives = 188/223 (84%)
 Frame = +1

Query: 79  LSKXRKFVGXGVFKAELNXFLTXXLAEXGXSGVEVRVTPIRSEXIIMATRXQSVLGEKGR 258
           +SK RKFV  G+FKAELN FLT  LAE G SGVEVRVTP  +E IIMAT+ Q VL EKGR
Sbjct: 7   ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPFGTEIIIMATKTQQVLAEKGR 66

Query: 259 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 438
           RIRELT++VQKRFN     +ELYAEKVA RGLCAIAQAESLRYKL G LAVRRACYGVLR
Sbjct: 67  RIRELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGELAVRRACYGVLR 126

Query: 439 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 618
           +IMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV TATRHVLLRQGVLGI
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186

Query: 619 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVR 747
           KVK+MLP+D + K GPKKP PD++ V EPK+E +   P +E +
Sbjct: 187 KVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYK 229


>AJ238847-1|CAB52798.1| 1301|Drosophila melanogaster drosophila
           dodeca-satellite protein1 protein.
          Length = 1301

 Score = 34.3 bits (75), Expect = 0.32
 Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +1

Query: 238 VLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLC-AIAQAE 375
           +LG+ G+R+RE+  V   R NIP QS E  +E +   G    IAQAE
Sbjct: 183 ILGKGGQRLREIERVTATRINIPSQSDE--SEFITIAGTKEGIAQAE 227


>AF132179-1|AAD34767.1| 1301|Drosophila melanogaster unknown
           protein.
          Length = 1301

 Score = 34.3 bits (75), Expect = 0.32
 Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +1

Query: 238 VLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLC-AIAQAE 375
           +LG+ G+R+RE+  V   R NIP QS E  +E +   G    IAQAE
Sbjct: 183 ILGKGGQRLREIERVTATRINIPSQSDE--SEFITIAGTKEGIAQAE 227


>AE013599-2691|AAM68451.1| 1301|Drosophila melanogaster CG5170-PF,
           isoform F protein.
          Length = 1301

 Score = 34.3 bits (75), Expect = 0.32
 Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +1

Query: 238 VLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLC-AIAQAE 375
           +LG+ G+R+RE+  V   R NIP QS E  +E +   G    IAQAE
Sbjct: 183 ILGKGGQRLREIERVTATRINIPSQSDE--SEFITIAGTKEGIAQAE 227


>AE013599-2690|AAM68450.1| 1301|Drosophila melanogaster CG5170-PE,
           isoform E protein.
          Length = 1301

 Score = 34.3 bits (75), Expect = 0.32
 Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +1

Query: 238 VLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLC-AIAQAE 375
           +LG+ G+R+RE+  V   R NIP QS E  +E +   G    IAQAE
Sbjct: 183 ILGKGGQRLREIERVTATRINIPSQSDE--SEFITIAGTKEGIAQAE 227


>AE013599-2689|AAM68449.1| 1301|Drosophila melanogaster CG5170-PD,
           isoform D protein.
          Length = 1301

 Score = 34.3 bits (75), Expect = 0.32
 Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +1

Query: 238 VLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLC-AIAQAE 375
           +LG+ G+R+RE+  V   R NIP QS E  +E +   G    IAQAE
Sbjct: 183 ILGKGGQRLREIERVTATRINIPSQSDE--SEFITIAGTKEGIAQAE 227


>AE013599-2688|AAF57691.2| 1301|Drosophila melanogaster CG5170-PC,
           isoform C protein.
          Length = 1301

 Score = 34.3 bits (75), Expect = 0.32
 Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +1

Query: 238 VLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLC-AIAQAE 375
           +LG+ G+R+RE+  V   R NIP QS E  +E +   G    IAQAE
Sbjct: 183 ILGKGGQRLREIERVTATRINIPSQSDE--SEFITIAGTKEGIAQAE 227


>AE013599-2687|AAS64810.1| 1301|Drosophila melanogaster CG5170-PB,
           isoform B protein.
          Length = 1301

 Score = 34.3 bits (75), Expect = 0.32
 Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +1

Query: 238 VLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLC-AIAQAE 375
           +LG+ G+R+RE+  V   R NIP QS E  +E +   G    IAQAE
Sbjct: 183 ILGKGGQRLREIERVTATRINIPSQSDE--SEFITIAGTKEGIAQAE 227


>AE013599-2686|AAS64809.1| 1301|Drosophila melanogaster CG5170-PA,
           isoform A protein.
          Length = 1301

 Score = 34.3 bits (75), Expect = 0.32
 Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +1

Query: 238 VLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLC-AIAQAE 375
           +LG+ G+R+RE+  V   R NIP QS E  +E +   G    IAQAE
Sbjct: 183 ILGKGGQRLREIERVTATRINIPSQSDE--SEFITIAGTKEGIAQAE 227


>AE014298-2726|AAF48847.1|  494|Drosophila melanogaster CG15046-PA
           protein.
          Length = 494

 Score = 32.7 bits (71), Expect = 0.98
 Identities = 14/50 (28%), Positives = 21/50 (42%)
 Frame = +2

Query: 50  PDCNHGRVTIFQSXANLLXLGFSRRNSMXSSLGXWPRXAXPAWKCGSLPS 199
           P C    +T  Q   +L+ +G+ +       L   P    P W CG LP+
Sbjct: 356 PICTQFELTRLQRSGSLVAVGWGKGEDTDCPLFEMPMRLRPTWACGDLPN 405


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,559,363
Number of Sequences: 53049
Number of extensions: 730167
Number of successful extensions: 2861
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2858
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 6086993892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)