Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_H21
(1211 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P48159 Cluster: 60S ribosomal protein L23; n=39; cellul... 263 7e-69
UniRef50_P62829 Cluster: 60S ribosomal protein L23; n=156; cellu... 256 6e-67
UniRef50_Q8SRA7 Cluster: 60S ribosomal protein L23; n=3; Eukaryo... 149 1e-34
UniRef50_A0RVY3 Cluster: Ribosomal protein L14; n=2; Thermoprote... 135 2e-30
UniRef50_O59427 Cluster: 50S ribosomal protein L14P; n=7; Archae... 134 4e-30
UniRef50_Q8PV40 Cluster: 50S ribosomal protein L14P; n=36; Archa... 126 1e-27
UniRef50_Q8ZTR0 Cluster: 50S ribosomal protein L14P; n=10; Therm... 125 2e-27
UniRef50_UPI0000D9F818 Cluster: PREDICTED: similar to 60S riboso... 98 3e-19
UniRef50_A7DSY4 Cluster: Putative uncharacterized protein; n=1; ... 91 5e-17
UniRef50_Q2KL07 Cluster: Ribosomal protein L23; n=3; Eukaryota|R... 79 3e-13
UniRef50_O46904 Cluster: Chloroplast 50S ribosomal protein L14; ... 73 1e-11
UniRef50_Q5KJU6 Cluster: Mitochondrial 60s ribosomal protein l38... 71 6e-11
UniRef50_Q39KF7 Cluster: 50S ribosomal protein L14; n=109; cellu... 71 6e-11
UniRef50_Q9RXJ2 Cluster: 50S ribosomal protein L14; n=113; cellu... 71 8e-11
UniRef50_P0A473 Cluster: 50S ribosomal protein L14; n=69; cellul... 69 2e-10
UniRef50_Q9UX96 Cluster: Putative uncharacterized protein ORF-c1... 69 2e-10
UniRef50_P56792 Cluster: Chloroplast 50S ribosomal protein L14; ... 69 2e-10
UniRef50_Q9XD26 Cluster: 50S ribosomal protein L14; n=407; cellu... 68 6e-10
UniRef50_Q676X9 Cluster: HUELLENLOS-like protein; n=1; Hyacinthu... 66 2e-09
UniRef50_Q00UK0 Cluster: Ribosomal protein L23; n=1; Ostreococcu... 65 3e-09
UniRef50_Q7RBS4 Cluster: LSU ribosomal protein L14P; n=4; Aconoi... 59 3e-07
UniRef50_A7IFZ1 Cluster: Ribosomal protein L14; n=1; Xanthobacte... 58 3e-07
UniRef50_A3U7M5 Cluster: 50S ribosomal protein L14; n=1; Croceib... 56 1e-06
UniRef50_A5K9G7 Cluster: 50S ribosomal subunit protein L14, puta... 56 2e-06
UniRef50_Q8W9T2 Cluster: Ribosomal protein L14; n=1; Mesostigma ... 53 2e-05
UniRef50_Q3S293 Cluster: Ribosomal protein L14; n=1; Thalassiosi... 51 7e-05
UniRef50_Q9G8Q2 Cluster: Ribosomal protein L14; n=1; Naegleria g... 50 2e-04
UniRef50_Q9LNP8 Cluster: F1L3.27; n=14; Magnoliophyta|Rep: F1L3.... 49 3e-04
UniRef50_A0IXJ1 Cluster: Ribosomal protein L14b/L23e precursor; ... 47 9e-04
UniRef50_O21033 Cluster: Mitochondrial 60S ribosomal protein L14... 47 0.001
UniRef50_Q9G8Z6 Cluster: Ribosomal protein L14; n=1; Ochromonas ... 46 0.002
UniRef50_Q9TAK1 Cluster: Ribosomal protein L14; n=1; Cafeteria r... 44 0.006
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 43 0.014
UniRef50_A6SDC7 Cluster: 50S ribosomal protein L14; n=7; Pezizom... 43 0.014
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 43 0.018
UniRef50_A0NWH4 Cluster: 50S ribosomal protein L14; n=2; Bacteri... 42 0.024
UniRef50_Q9TCB2 Cluster: Ribosomal protein L14; n=1; Nephroselmi... 42 0.042
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 42 0.042
UniRef50_Q9G8W6 Cluster: Ribosomal protein L14; n=1; Rhodomonas ... 41 0.074
UniRef50_Q7YN74 Cluster: Ribosomal protein L14; n=2; Eimeriorina... 41 0.074
UniRef50_P15767 Cluster: Mitochondrial 60S ribosomal protein L14... 39 0.30
UniRef50_Q9ZZN9 Cluster: 50S ribosomal protein L14; n=1; Cyanidi... 38 0.40
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 38 0.69
UniRef50_Q6UVR4 Cluster: Ribosomal protein L14; n=1; Pseudendocl... 35 4.9
UniRef50_UPI0000E8063D Cluster: PREDICTED: hypothetical protein;... 34 8.5
UniRef50_Q3HKP9 Cluster: Capsule polysaccharide export protein; ... 34 8.5
>UniRef50_P48159 Cluster: 60S ribosomal protein L23; n=39; cellular
organisms|Rep: 60S ribosomal protein L23 - Drosophila
melanogaster (Fruit fly)
Length = 140
Score = 263 bits (644), Expect = 7e-69
Identities = 124/131 (94%), Positives = 127/131 (96%)
Frame = +2
Query: 71 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDM 250
MSKRGRGG+AG KFRISLGLPVGAV+NCADNTGAKNLYVIAV GI+GRLNRLPAAG GDM
Sbjct: 1 MSKRGRGGTAGGKFRISLGLPVGAVMNCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDM 60
Query: 251 IVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 430
VATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP
Sbjct: 61 FVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 431 VAKECADLWPR 463
VAKECADLWPR
Sbjct: 121 VAKECADLWPR 131
>UniRef50_P62829 Cluster: 60S ribosomal protein L23; n=156; cellular
organisms|Rep: 60S ribosomal protein L23 - Homo sapiens
(Human)
Length = 140
Score = 256 bits (628), Expect = 6e-67
Identities = 119/131 (90%), Positives = 128/131 (97%)
Frame = +2
Query: 71 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDM 250
MSKRGRGGS+GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 251 IVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 430
++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 431 VAKECADLWPR 463
VAKECADLWPR
Sbjct: 121 VAKECADLWPR 131
>UniRef50_Q8SRA7 Cluster: 60S ribosomal protein L23; n=3;
Eukaryota|Rep: 60S ribosomal protein L23 -
Encephalitozoon cuniculi
Length = 146
Score = 149 bits (361), Expect = 1e-34
Identities = 67/119 (56%), Positives = 92/119 (77%)
Frame = +2
Query: 107 KFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPEL 286
+++++ G+ V ++ CADN+GAK L I V+ +GRLNRLPAA GD+ V +VKKGKPEL
Sbjct: 19 RYKMTRGIQVETLMKCADNSGAKILRCIGVKRYRGRLNRLPAAAPGDICVVSVKKGKPEL 78
Query: 287 RKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 463
RKKV A++IRQ+K +RR DG I FEDNA V++NNKGE++G+ I GPV +E AD+WP+
Sbjct: 79 RKKVHYAILIRQKKIWRRTDGSHIMFEDNAAVLINNKGELRGAQIAGPVPREVADMWPK 137
>UniRef50_A0RVY3 Cluster: Ribosomal protein L14; n=2;
Thermoprotei|Rep: Ribosomal protein L14 - Cenarchaeum
symbiosum
Length = 144
Score = 135 bits (326), Expect = 2e-30
Identities = 70/131 (53%), Positives = 90/131 (68%), Gaps = 3/131 (2%)
Frame = +2
Query: 80 RGRGGSAGAK-FR--ISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDM 250
R RG + G + FR ++ LPVGA + CADN+GAK L +I VQ K R++RLPAA GD
Sbjct: 5 RSRGKAKGVEEFRPYVTRALPVGARVTCADNSGAKVLEIIMVQKAKTRVSRLPAAAVGDY 64
Query: 251 IVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 430
+ VKKG ELRK+V AV+IRQ+ P RR +GV + FEDNA V+ +GEMKG+ I GP
Sbjct: 65 VNVVVKKGPAELRKQVHGAVIIRQKYPVRRLNGVRVAFEDNAAVLTTPEGEMKGTDIKGP 124
Query: 431 VAKECADLWPR 463
VA E ++ WPR
Sbjct: 125 VAAEASEKWPR 135
>UniRef50_O59427 Cluster: 50S ribosomal protein L14P; n=7;
Archaea|Rep: 50S ribosomal protein L14P - Pyrococcus
horikoshii
Length = 141
Score = 134 bits (324), Expect = 4e-30
Identities = 66/132 (50%), Positives = 92/132 (69%), Gaps = 1/132 (0%)
Frame = +2
Query: 71 MSKRGRGGSAG-AKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGD 247
M+K+G G + G + R + +P+GA + ADN+GAK + VI V G RL +AG GD
Sbjct: 1 MAKKGAGATRGISPVRPTRAIPIGAYLTVADNSGAKVIQVIGVVEYHGTRRRLASAGVGD 60
Query: 248 MIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITG 427
M+VATVKKG+P++R +V+ AV+IRQRK +RR DG+ + FEDNA VIV +G +G+ I G
Sbjct: 61 MVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRVKFEDNAAVIVTPEGVPRGTEIRG 120
Query: 428 PVAKECADLWPR 463
PVA+E A+ W R
Sbjct: 121 PVAREAAEKWVR 132
>UniRef50_Q8PV40 Cluster: 50S ribosomal protein L14P; n=36;
Archaea|Rep: 50S ribosomal protein L14P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 132
Score = 126 bits (304), Expect = 1e-27
Identities = 61/121 (50%), Positives = 84/121 (69%)
Frame = +2
Query: 101 GAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKP 280
G + I L GA I C DNTGAK + +I+V+ +G NR+P AG GDM V +VKKG P
Sbjct: 3 GIRSNIPRALNAGAQIACVDNTGAKVVEIISVKKYRGVKNRMPCAGIGDMCVVSVKKGTP 62
Query: 281 ELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWP 460
E+RK+++ AVV+RQ++ FRR DG+ + FEDNA VI + G KG+ I GPVA+E A+ +P
Sbjct: 63 EMRKQILLAVVVRQKQEFRRPDGLHVSFEDNAMVITDEDGIPKGTDIKGPVAREVAERFP 122
Query: 461 R 463
+
Sbjct: 123 K 123
>UniRef50_Q8ZTR0 Cluster: 50S ribosomal protein L14P; n=10;
Thermoprotei|Rep: 50S ribosomal protein L14P -
Pyrobaculum aerophilum
Length = 144
Score = 125 bits (302), Expect = 2e-27
Identities = 63/134 (47%), Positives = 90/134 (67%), Gaps = 4/134 (2%)
Frame = +2
Query: 71 MSKRGRGGSAGA--KFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRL--NRLPAAG 238
M+KRG + G +F ++ G+ + +++ ADN+GAK + VI V G + R+P AG
Sbjct: 1 MAKRGGKRTVGVPYRFHVTPGIFMNSLVPVADNSGAKLVRVIGVVGHYSKTVHRRIPGAG 60
Query: 239 SGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSA 418
GDM+V V++GKPELRK++ A+V+RQR+P+RR DG ++ FEDNA VIV +G+ KGS
Sbjct: 61 VGDMVVVVVREGKPELRKQIFRAIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEGDPKGSE 120
Query: 419 ITGPVAKECADLWP 460
I GPVA E WP
Sbjct: 121 IHGPVAMEATLRWP 134
>UniRef50_UPI0000D9F818 Cluster: PREDICTED: similar to 60S ribosomal
protein L23; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L23 - Macaca mulatta
Length = 98
Score = 98.3 bits (234), Expect = 3e-19
Identities = 48/75 (64%), Positives = 58/75 (77%)
Frame = +2
Query: 71 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDM 250
M KR GGS+ KFRISLGLP GAVIN AD+TGAK+LY+I+ +GI GRLNRLPAA G M
Sbjct: 1 MLKRECGGSSSVKFRISLGLPAGAVINYADSTGAKSLYIISRKGINGRLNRLPAADVGYM 60
Query: 251 IVATVKKGKPELRKK 295
++ TVKK + +KK
Sbjct: 61 VITTVKKRQTRAQKK 75
>UniRef50_A7DSY4 Cluster: Putative uncharacterized protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Putative
uncharacterized protein - Candidatus Nitrosopumilus
maritimus SCM1
Length = 148
Score = 91.1 bits (216), Expect = 5e-17
Identities = 54/113 (47%), Positives = 63/113 (55%)
Frame = -3
Query: 468 AIRGHRSAHSLATGPVMAEPFISPLLLTMTPALSSKYINTPSRLLNGFRCLMTTAGITFF 289
A GH S S ATGP+M+ PF+SP + T ALSSK TP L G+ CL+ TA T F
Sbjct: 14 ATLGHFSEASAATGPLMSVPFVSPSGVINTAALSSKQTLTPFNLRTGYFCLIITAPYTCF 73
Query: 288 RSSGLPFLTVATIMSPEPAAGSLFRRPLIPWTAITYRFFAPVLSAQLITAPTG 130
+S PF T SP A G+L L T IT + FAP LSA I APTG
Sbjct: 74 LNSAGPFFTTTLQKSPTDAEGNLDALVLCLGTLITSKIFAPELSAHTIFAPTG 126
>UniRef50_Q2KL07 Cluster: Ribosomal protein L23; n=3; Eukaryota|Rep:
Ribosomal protein L23 - Siniperca chuatsi (Chinese
perch)
Length = 46
Score = 78.6 bits (185), Expect = 3e-13
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +2
Query: 71 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNL 181
MSKRGRGGS+GAKFRISLGLPVGAVINCADNTGAKNL
Sbjct: 10 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNL 46
>UniRef50_O46904 Cluster: Chloroplast 50S ribosomal protein L14;
n=64; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L14 - Guillardia theta (Cryptomonas phi)
Length = 121
Score = 73.3 bits (172), Expect = 1e-11
Identities = 41/105 (39%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Frame = +2
Query: 146 INCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPEL---RKKVMPAVVI 316
+ ADN+GAK + I + G G NR A GD+I+ VK P + R V+ AV++
Sbjct: 8 LTVADNSGAKKIMCIRILG--G--NR-KYASIGDVIIGVVKDATPNMPVKRSDVVRAVIM 62
Query: 317 RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECAD 451
R + RR+DG+ I F+DNA VI+N + +G+ + GP+A+E D
Sbjct: 63 RTKNTIRRKDGMSIRFDDNAAVIINKENNPRGTRVFGPIARELRD 107
>UniRef50_Q5KJU6 Cluster: Mitochondrial 60s ribosomal protein l38
(Yml38), putative; n=13; Dikarya|Rep: Mitochondrial 60s
ribosomal protein l38 (Yml38), putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 149
Score = 70.9 bits (166), Expect = 6e-11
Identities = 46/118 (38%), Positives = 63/118 (53%), Gaps = 18/118 (15%)
Frame = +2
Query: 143 VINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKP-------------- 280
++N DNTGA + I V +K RL A GD IV V K +P
Sbjct: 7 ILNVIDNTGALKVECINVLKVKTRLKSTGFATVGDEIVCVVNKARPIPANEVVKNPNASS 66
Query: 281 ---ELRK-KVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKE 442
++RK + AVV+R +K +R DG + F+D+A V++NNKGEM G+ I GPVA E
Sbjct: 67 NIQKIRKGDIRRAVVVRVKKTTQRPDGSVVRFDDSAAVLLNNKGEMLGTRIVGPVASE 124
>UniRef50_Q39KF7 Cluster: 50S ribosomal protein L14; n=109; cellular
organisms|Rep: 50S ribosomal protein L14 - Burkholderia
sp. (strain 383) (Burkholderia cepacia (strain ATCC
17760/ NCIB 9086 / R18194))
Length = 122
Score = 70.9 bits (166), Expect = 6e-11
Identities = 45/102 (44%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Frame = +2
Query: 146 INCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKK---VMPAVVI 316
+ ADNTGA+ + I V G G R AG GD+I +VK+ P R K + AVV+
Sbjct: 8 LEVADNTGAREVLCIKVLG--GSKRRY--AGIGDIIKVSVKEATPRGRVKKGEIYNAVVV 63
Query: 317 RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKE 442
R K RR+DG I F+ NA V++NNK E G+ I GPV +E
Sbjct: 64 RTAKGVRRQDGSLIKFDGNAAVLLNNKLEPIGTRIFGPVTRE 105
>UniRef50_Q9RXJ2 Cluster: 50S ribosomal protein L14; n=113; cellular
organisms|Rep: 50S ribosomal protein L14 - Deinococcus
radiodurans
Length = 134
Score = 70.5 bits (165), Expect = 8e-11
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
Frame = +2
Query: 146 INCADNTGAKNLYVIAV--QGIKGRLNRLPAAGS------GDMIVATVKKGKPELRKK-- 295
++ ADN+GA+ + I V GI G+ G+ GD+IVA+VK P K
Sbjct: 8 LDVADNSGAREIMCIRVLNSGIGGKGLTTGGGGNKRYAHVGDIIVASVKDAAPRGAVKAG 67
Query: 296 -VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECAD 451
V+ AVV+R +R DG I F+ NA VI+NN+GE +G+ + GPVA+E D
Sbjct: 68 DVVKAVVVRTSHAIKRADGSTIRFDRNAAVIINNQGEPRGTRVFGPVARELRD 120
>UniRef50_P0A473 Cluster: 50S ribosomal protein L14; n=69; cellular
organisms|Rep: 50S ribosomal protein L14 - Streptococcus
pneumoniae
Length = 122
Score = 69.3 bits (162), Expect = 2e-10
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Frame = +2
Query: 146 INCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKP--ELRK-KVMPAVVI 316
+ ADN+GA+ + I V G GR A GD+IVA+VK+ P ++K V+ AV++
Sbjct: 8 LKVADNSGAREILTIKVLGGSGR----KFANIGDVIVASVKQATPGGAVKKGDVVKAVIV 63
Query: 317 RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKE 442
R + RR DG +I F++NA VI+ +G+ I GPVA+E
Sbjct: 64 RTKSGARRADGSYIKFDENAAVIIREDKTPRGTRIFGPVARE 105
>UniRef50_Q9UX96 Cluster: Putative uncharacterized protein
ORF-c10_023; n=2; Archaea|Rep: Putative uncharacterized
protein ORF-c10_023 - Sulfolobus solfataricus
Length = 107
Score = 68.9 bits (161), Expect = 2e-10
Identities = 42/88 (47%), Positives = 51/88 (57%)
Frame = -3
Query: 468 AIRGHRSAHSLATGPVMAEPFISPLLLTMTPALSSKYINTPSRLLNGFRCLMTTAGITFF 289
AI GH SA SLA GP+ + PF P +T ALSSK I+ PS LL G CL TA F
Sbjct: 20 AIFGHLSAASLAIGPLTSVPFGVPSGFIITTALSSKEIHVPSGLLYGILCLTITALNFCF 79
Query: 288 RSSGLPFLTVATIMSPEPAAGSLFRRPL 205
+SG+PFL +S A G+L + PL
Sbjct: 80 LTSGVPFLIDTITISAMLANGTLLKTPL 107
>UniRef50_P56792 Cluster: Chloroplast 50S ribosomal protein L14;
n=151; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L14 - Arabidopsis thaliana (Mouse-ear cress)
Length = 122
Score = 68.9 bits (161), Expect = 2e-10
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Frame = +2
Query: 146 INCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPEL---RKKVMPAVVI 316
+N ADN+GA+ L I + G R A GD+IVA +K+ P R +V+ AV++
Sbjct: 8 LNVADNSGARELMCIRIIGASNRRY----AHIGDVIVAVIKEAIPNTPLERSEVIRAVIV 63
Query: 317 RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADL 454
R K +R +G I ++DNA V+++ +G KG+ + G + +E L
Sbjct: 64 RTCKELKRNNGTIIRYDDNAAVVIDQEGNPKGTRVFGAIPRELRQL 109
>UniRef50_Q9XD26 Cluster: 50S ribosomal protein L14; n=407; cellular
organisms|Rep: 50S ribosomal protein L14 - Leptospira
interrogans
Length = 130
Score = 67.7 bits (158), Expect = 6e-10
Identities = 45/114 (39%), Positives = 59/114 (51%), Gaps = 11/114 (9%)
Frame = +2
Query: 143 VINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPEL-----------R 289
++ ADN+G K + I V G G R A GD I+ VK +P
Sbjct: 7 LLQVADNSGIKKVMCIKVLG--GSKKRY--ASVGDEIIVAVKDAQPAFGLKDSTGKKVHN 62
Query: 290 KKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECAD 451
K V AVV+R K RR DG +I F+DNA I+++KG KG+ I GPVA+E D
Sbjct: 63 KAVQRAVVVRTTKEIRRPDGSYIRFDDNACAIIDDKGNPKGTRIFGPVARELRD 116
>UniRef50_Q676X9 Cluster: HUELLENLOS-like protein; n=1; Hyacinthus
orientalis|Rep: HUELLENLOS-like protein - Hyacinthus
orientalis (Common hyacinth)
Length = 171
Score = 65.7 bits (153), Expect = 2e-09
Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Frame = +2
Query: 146 INCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKK---VMPAVVI 316
+ DN+GAK V+ +Q +KG+ A GD I+A+VK+ +P+ + K V+ VV+
Sbjct: 59 LKVVDNSGAKR--VMCIQSLKGK----KGARLGDTIIASVKEAQPKGKVKKGDVVYGVVV 112
Query: 317 RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKE 442
R P R DG I F+DNA V+VN +GE G+ + GPV E
Sbjct: 113 RAAMPRGRCDGSEIKFDDNAVVLVNKQGEPIGTRVFGPVPHE 154
>UniRef50_Q00UK0 Cluster: Ribosomal protein L23; n=1; Ostreococcus
tauri|Rep: Ribosomal protein L23 - Ostreococcus tauri
Length = 93
Score = 65.3 bits (152), Expect = 3e-09
Identities = 27/39 (69%), Positives = 35/39 (89%)
Frame = +2
Query: 83 GRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQ 199
G G ++G K+++S GLPVGAV+NCADNTGAKNLY+IAV+
Sbjct: 45 GGGNASGTKYKMSYGLPVGAVVNCADNTGAKNLYMIAVK 83
>UniRef50_Q7RBS4 Cluster: LSU ribosomal protein L14P; n=4;
Aconoidasida|Rep: LSU ribosomal protein L14P -
Plasmodium yoelii yoelii
Length = 124
Score = 58.8 bits (136), Expect = 3e-07
Identities = 35/111 (31%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
Frame = +2
Query: 116 ISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPE--LR 289
I GL +++ CADN+G +I + G+ N+ GD I +++ E +
Sbjct: 7 ILYGLWRQSIVRCADNSGVIKACIIGI----GK-NKWGTGKIGDRIRVSIRDKTSECGVS 61
Query: 290 KKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKE 442
+K +++R++K +R+DG +I F+DNA V++ +K ++K + I GPVA E
Sbjct: 62 EKTPKGIIVRRKKETKRKDGSYIKFDDNAFVMI-SKNKLKATKIKGPVAME 111
>UniRef50_A7IFZ1 Cluster: Ribosomal protein L14; n=1; Xanthobacter
autotrophicus Py2|Rep: Ribosomal protein L14 -
Xanthobacter sp. (strain Py2)
Length = 144
Score = 58.4 bits (135), Expect = 3e-07
Identities = 38/87 (43%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Frame = +2
Query: 146 INCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKK---VMPAVVI 316
++ ADN+GA+ + I V G R A GD+IV +VK+ P R K VM AVV+
Sbjct: 8 LDVADNSGARRVMCIKVLGGSKR----KYAHVGDIIVVSVKEAIPRGRVKKGDVMKAVVV 63
Query: 317 RQRKPFRRRDGVFIYFEDNAGVIVNNK 397
R K RR DG I F+ NA V++NNK
Sbjct: 64 RTAKDIRRVDGSVIRFDRNAAVLINNK 90
>UniRef50_A3U7M5 Cluster: 50S ribosomal protein L14; n=1;
Croceibacter atlanticus HTCC2559|Rep: 50S ribosomal
protein L14 - Croceibacter atlanticus HTCC2559
Length = 135
Score = 56.4 bits (130), Expect = 1e-06
Identities = 45/104 (43%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -3
Query: 450 SAHSLATGPVMAEPFISPLLLTMTPALSSKYINTPSRLLNGFRCLMTTAGIT---FFRSS 280
S SLATGP P ISP+ T ALSSK I PS L F TTA T
Sbjct: 27 SRSSLATGPKTRVPLISPVGFNNTHALSSKRIYEPSGLRTSFLVRTTTAVETAPFLIPPF 86
Query: 279 GLPFLTVATIMSPEPAAGSLFRRPLIPWTAITYRFFAPVLSAQL 148
G+ T+ TI+SP A + R + P T I FAPVLSA L
Sbjct: 87 GVASFTLTTILSPTDA----YLRLVPPNTRIVKTSFAPVLSATL 126
>UniRef50_A5K9G7 Cluster: 50S ribosomal subunit protein L14,
putative; n=4; Aconoidasida|Rep: 50S ribosomal subunit
protein L14, putative - Plasmodium vivax
Length = 183
Score = 55.6 bits (128), Expect = 2e-06
Identities = 34/108 (31%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Frame = +2
Query: 125 GLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATV--KKGKPELRKKV 298
GL +++ ADN+G +I + G+ N+ GD I ++ K +++K
Sbjct: 69 GLWRQSIVRSADNSGVIKACIIGI----GK-NKWGTGKIGDRIRVSIRDKTNDCTIQEKT 123
Query: 299 MPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKE 442
+++R++K +R+DG +I F+DNA VI+ +K ++K + I GPVA E
Sbjct: 124 PKGIIVRRKKETKRKDGSYIKFDDNAFVII-SKNKLKATKIKGPVAME 170
>UniRef50_Q8W9T2 Cluster: Ribosomal protein L14; n=1; Mesostigma
viride|Rep: Ribosomal protein L14 - Mesostigma viride
Length = 124
Score = 52.8 bits (121), Expect = 2e-05
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Frame = +2
Query: 128 LPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPE----LRK- 292
+PVGAVI DNTG + + + V R GD IV +V KP+ ++K
Sbjct: 2 IPVGAVIKVIDNTGVRWVRCLKVLDRASR----DGGSVGDRIVVSVLSSKPKEKLHIQKG 57
Query: 293 KVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKE 442
+V A+++ +K R +G I F N V++N +G++ G+ I PV E
Sbjct: 58 EVKLALIVETKKELGRINGTRISFSQNGAVLLNAQGQILGTRILYPVTHE 107
>UniRef50_Q3S293 Cluster: Ribosomal protein L14; n=1; Thalassiosira
pseudonana|Rep: Ribosomal protein L14 - Thalassiosira
pseudonana (Marine diatom)
Length = 126
Score = 50.8 bits (116), Expect = 7e-05
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 7/106 (6%)
Frame = +2
Query: 143 VINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRK-------KVM 301
++ ADN+GAK + I V + G R A GD+I+ +++K + + R +V
Sbjct: 7 ILKVADNSGAKTVKCIKV--LNGFNRRF--AVLGDIIIVSIQKLRNKARSTSKVQKGEVH 62
Query: 302 PAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAK 439
AV+IR +K ++DG ++F+ N +++ +G+ S I GP+ K
Sbjct: 63 KAVIIRTKKKTIKKDGTVVFFQSNVVSLISKQGKPIASRIMGPIPK 108
>UniRef50_Q9G8Q2 Cluster: Ribosomal protein L14; n=1; Naegleria
gruberi|Rep: Ribosomal protein L14 - Naegleria gruberi
Length = 123
Score = 49.6 bits (113), Expect = 2e-04
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Frame = +2
Query: 158 DNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMP-----AVVIRQ 322
DN+G K I V +K + A GD IV +KK K + KV +++R
Sbjct: 12 DNSGGKQAECIKV--LKKKYQH---ASVGDYIVVAIKKVKMRKKMKVKMHDVRFGIIVRT 66
Query: 323 RKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKE 442
+K +R +G+++ FEDNA V+++ G+ I GP++ E
Sbjct: 67 KKNIKRYNGIYVSFEDNAMVLLDKNLNPIGNRINGPLSYE 106
>UniRef50_Q9LNP8 Cluster: F1L3.27; n=14; Magnoliophyta|Rep: F1L3.27
- Arabidopsis thaliana (Mouse-ear cress)
Length = 201
Score = 48.8 bits (111), Expect = 3e-04
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 15/110 (13%)
Frame = +2
Query: 128 LPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKV--- 298
+ +G ++ C DN+ AK V+ +Q ++G+ A GD+IV +VK+ P ++KKV
Sbjct: 54 IQMGTILKCVDNSCAKE--VMCIQSLRGK----KGARLGDIIVGSVKEANPIVQKKVKKD 107
Query: 299 -MP-----------AVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKG 412
+P VV+R P R DG + F+DNA V+V K E KG
Sbjct: 108 AIPKGKVKKGMVVYGVVVRAAMPKGRADGSQVKFDDNAIVVVGIK-EKKG 156
>UniRef50_A0IXJ1 Cluster: Ribosomal protein L14b/L23e precursor;
n=1; Serratia proteamaculans 568|Rep: Ribosomal protein
L14b/L23e precursor - Serratia proteamaculans 568
Length = 119
Score = 47.2 bits (107), Expect = 9e-04
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +2
Query: 296 VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMK-GSAITGPVAKE 442
V+ AVV+R +K RR DG I F+ NA VI+NN E G+ I GPV +E
Sbjct: 53 VLKAVVVRTKKGVRRPDGSVIRFDGNACVILNNNSEQPIGTRIFGPVTRE 102
>UniRef50_O21033 Cluster: Mitochondrial 60S ribosomal protein L14;
n=2; Dictyosteliida|Rep: Mitochondrial 60S ribosomal
protein L14 - Dictyostelium discoideum (Slime mold)
Length = 129
Score = 46.8 bits (106), Expect = 0.001
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 9/111 (8%)
Frame = +2
Query: 137 GAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKK------GKPELRKK- 295
G+ + DN+GA+ V +Q ++G+ GD IV +KK GK +L+ K
Sbjct: 5 GSNFSVMDNSGARK--VQCIQTLEGK-KPTSLLRVGDKIVVVIKKMEKRKGGKYKLKVKK 61
Query: 296 --VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKE 442
V AV+++ ++P RR+ G+ + +N +++ E G+ +TG V KE
Sbjct: 62 SDVCYAVIVKSKQPVRRKSGIIVNAGENGVILLTKTKEPIGTRLTGVVFKE 112
>UniRef50_Q9G8Z6 Cluster: Ribosomal protein L14; n=1; Ochromonas
danica|Rep: Ribosomal protein L14 - Ochromonas danica
Length = 127
Score = 46.0 bits (104), Expect = 0.002
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 7/109 (6%)
Frame = +2
Query: 137 GAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVK--KGKPELRKK---VM 301
G+ +N DN+G K + I V G G R A SGD+I+A++K K K ++ K V+
Sbjct: 5 GSYLNVIDNSGVKQIACIHVFG--GYRKRY--AKSGDLIMASIKSIKYKQNIKLKKGDVV 60
Query: 302 PAVVIRQRK-PFRRRD-GVFIYFEDNAGVIVNNKGEMKGSAITGPVAKE 442
AVV++ + F R++ I F +N +I++NK ++ G+ I G + K+
Sbjct: 61 RAVVVKTKVFSFLRKEIKTPIKFFENGAIILSNKNKLVGTRIFGGINKQ 109
>UniRef50_Q9TAK1 Cluster: Ribosomal protein L14; n=1; Cafeteria
roenbergensis|Rep: Ribosomal protein L14 - Cafeteria
roenbergensis
Length = 124
Score = 44.4 bits (100), Expect = 0.006
Identities = 27/104 (25%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Frame = +2
Query: 137 GAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMI-VATVKKGKPELRK-KVMPAV 310
G+V+ DN+GA+ I V ++G N+ GS ++ + ++ G ++ +V AV
Sbjct: 5 GSVVEIVDNSGARVGRCICV--LEGFFNKTAVVGSLIVLSIRGIRSGSRRVKAGQVSLAV 62
Query: 311 VIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKE 442
++R + + +DG F+ N V++ K ++ G+ + GPV+++
Sbjct: 63 IVRTKAWTKFKDGSQSRFQRNCAVLLTRKKQILGTKVFGPVSRQ 106
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 43.2 bits (97), Expect = 0.014
Identities = 39/105 (37%), Positives = 44/105 (41%), Gaps = 2/105 (1%)
Frame = +1
Query: 853 PXPRSLTXCARSFGCGXRYQLTQRR*YGLSTXSGDXXGKNMXXKGHKRPXTVKXAXLLXF 1032
P PRSLT ARSFGCG RY+LT G D + K RP + F
Sbjct: 37 PLPRSLTRYARSFGCGERYRLTD----GDGNFLEDT--RKTLSKEEIRPRRSR------F 84
Query: 1033 SIGSAPLTXXQKXXXN-XXWXTXXXFKNP-XXPXXXPXXXPXFXP 1161
SIGSAPLT K T +K+P P P F P
Sbjct: 85 SIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLP 129
>UniRef50_A6SDC7 Cluster: 50S ribosomal protein L14; n=7;
Pezizomycotina|Rep: 50S ribosomal protein L14 -
Botryotinia fuckeliana B05.10
Length = 134
Score = 43.2 bits (97), Expect = 0.014
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +2
Query: 287 RKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKE 442
R + AVV+R K +R DG + F+DNA V++N GE G+ + G V E
Sbjct: 66 RGDIRHAVVVRTVKKLQRPDGSVVKFDDNACVLINKAGEPIGTRLNGVVGTE 117
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 42.7 bits (96), Expect = 0.018
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +1
Query: 598 DPDMIRYIDEFGQTTTXMQ 654
DPDMIRYIDEFGQTTT MQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A0NWH4 Cluster: 50S ribosomal protein L14; n=2;
Bacteria|Rep: 50S ribosomal protein L14 - Stappia
aggregata IAM 12614
Length = 147
Score = 42.3 bits (95), Expect = 0.024
Identities = 31/70 (44%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = -3
Query: 441 SLATGPVMAEPFISPLLLTMTPALSSKYINTPSRLLNGFRCLMTTAGIT---FFRSSGLP 271
S TGP + P S LLLT T AL S I PS F TTA IT R G+
Sbjct: 46 SRGTGPKIRVPIGSLLLLTSTAALRSNRITLPSGRRISFAVRTTTAFITSPFLTRPRGIA 105
Query: 270 FLTVATIMSP 241
LT T+MSP
Sbjct: 106 SLTETTMMSP 115
>UniRef50_Q9TCB2 Cluster: Ribosomal protein L14; n=1; Nephroselmis
olivacea|Rep: Ribosomal protein L14 - Nephroselmis
olivacea
Length = 124
Score = 41.5 bits (93), Expect = 0.042
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Frame = +2
Query: 128 LPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKK---- 295
+ VG ++ +DN+GAK I + + + A GD+IV T+KK + + K
Sbjct: 2 ISVGTYLDVSDNSGAKIAQCIRI--LSKQQGHF--ATVGDVIVVTIKKANSKYKGKATAG 57
Query: 296 -VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITG 427
V V++ +K R+DG F+ N ++ + G+ ITG
Sbjct: 58 QVYRGVILETKKEVTRKDGSLFSFDRNVVALMTPQENPMGTRITG 102
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 41.5 bits (93), Expect = 0.042
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1
Query: 793 SALMNRPTXGXRRFAYWALF 852
+ALMNRPT G RRFAYWALF
Sbjct: 25 AALMNRPTRGERRFAYWALF 44
>UniRef50_Q9G8W6 Cluster: Ribosomal protein L14; n=1; Rhodomonas
salina|Rep: Ribosomal protein L14 - Rhodomonas salina
(Cryptomonas salina)
Length = 113
Score = 40.7 bits (91), Expect = 0.074
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Frame = +2
Query: 143 VINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQ 322
+IN DN+G K V ++ IK ++ KK K ++KK + I
Sbjct: 7 IINIIDNSGIKT--VRCIRNIKNNTA---------LVSVFEKKSKTNIKKKSLFLAAIIC 55
Query: 323 RKPFR-RRDGVFIYFEDNAGVIVNNKGEMKGSAITGPV 433
K F +++G+F+ F N V++N+K + G+ GPV
Sbjct: 56 EKIFNSKKNGIFVAFNKNNAVLLNSKNNLIGTRFFGPV 93
>UniRef50_Q7YN74 Cluster: Ribosomal protein L14; n=2;
Eimeriorina|Rep: Ribosomal protein L14 - Eimeria tenella
Length = 121
Score = 40.7 bits (91), Expect = 0.074
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Frame = +2
Query: 134 VGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKK---GKPELRKKVMP 304
+ N ADN+G K ++ +Q + + ++ GD+IV +KK + ++
Sbjct: 4 INTYFNIADNSGVKK--ILCIQNLTKKTKKIEI---GDLIVGVIKKINNTSKLIYSNIVY 58
Query: 305 AVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAK 439
+VIR +K I F DN+ V+V+ GS I G + K
Sbjct: 59 GIVIRLKKNINLYKKYNISFNDNSAVLVDKNLNPIGSRIFGTIPK 103
>UniRef50_P15767 Cluster: Mitochondrial 60S ribosomal protein L14;
n=1; Paramecium tetraurelia|Rep: Mitochondrial 60S
ribosomal protein L14 - Paramecium tetraurelia
Length = 119
Score = 38.7 bits (86), Expect = 0.30
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +2
Query: 197 QGIKGRLNRLPAAGSGDMIVATVKKGKPEL---RKKVMPAVVIRQRKPFRRRDGVFIYFE 367
+G + R+ RL GD I +++ KPE R K A+++R +RDG F F
Sbjct: 26 RGFRHRIGRL-----GDYIKVSIRSTKPECTIKRGKKKKAIIVRHAFGRLKRDGSFSKFS 80
Query: 368 DNAGVIVNNKGEMKGSAITGPV 433
N V++ + G I GP+
Sbjct: 81 SNVCVLLKKRTAPLGREIKGPI 102
>UniRef50_Q9ZZN9 Cluster: 50S ribosomal protein L14; n=1;
Cyanidioschyzon merolae|Rep: 50S ribosomal protein L14 -
Cyanidioschyzon merolae (Red alga)
Length = 127
Score = 38.3 bits (85), Expect = 0.40
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 8/107 (7%)
Frame = +2
Query: 137 GAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVK---KGKPELRKKVMP- 304
G + DN+GA I + G N A G I+ T+K + +R K+
Sbjct: 5 GTYLRVIDNSGATLAKCIGILGS----NSPKYAKVGSTIIVTIKELYRSNNSVRSKIEKG 60
Query: 305 ----AVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPV 433
A+++R +K R D ++ F DN V+++NK + + + GP+
Sbjct: 61 IISHALIVRTKKKNRSLDNIWTNFIDNGVVLLDNKKSLMFTRVRGPI 107
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 37.5 bits (83), Expect = 0.69
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -2
Query: 847 APNTQTAXPRALADSLMQ 794
APNTQTA PRALADSLMQ
Sbjct: 331 APNTQTASPRALADSLMQ 348
>UniRef50_Q6UVR4 Cluster: Ribosomal protein L14; n=1;
Pseudendoclonium akinetum|Rep: Ribosomal protein L14 -
Pseudendoclonium akinetum (Green alga)
Length = 129
Score = 34.7 bits (76), Expect = 4.9
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 10/90 (11%)
Frame = +2
Query: 158 DNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPE-----LRK-----KVMPA 307
DN+G I VQ + + ++ P GD + ATVKKG + L+K ++
Sbjct: 12 DNSGIILAQCIQVQ--RSKKSQKPCK-IGDFLKATVKKGSAKSQTQRLKKLTGSERLRNL 68
Query: 308 VVIRQRKPFRRRDGVFIYFEDNAGVIVNNK 397
VVI+ + RR DG I F N G+ VN +
Sbjct: 69 VVIQTKSALRRLDGGAIRFNANCGITVNER 98
>UniRef50_UPI0000E8063D Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 350
Score = 33.9 bits (74), Expect = 8.5
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = +1
Query: 127 SPSGSSNQLRRQHRGKESVCDRCPRYQRSPEQTAGGRFRGHDCGHSQKG*T*TPEKGNAG 306
+P +N++RR RG + V D+C + T G G D G S+ PE+G G
Sbjct: 198 APLSPANEMRRGGRGSDPVTDKCGEANGKRQLTGRGPI-GGDAGESE-----APERGGVG 251
Query: 307 SGHQA 321
+A
Sbjct: 252 VAERA 256
>UniRef50_Q3HKP9 Cluster: Capsule polysaccharide export protein;
n=4; Rhodobacteraceae|Rep: Capsule polysaccharide export
protein - Rhodobacter sphaeroides (strain ATCC 17023 /
2.4.1 / NCIB 8253 / DSM158)
Length = 611
Score = 33.9 bits (74), Expect = 8.5
Identities = 28/70 (40%), Positives = 34/70 (48%)
Frame = -3
Query: 288 RSSGLPFLTVATIMSPEPAAGSLFRRPLIPWTAITYRFFAPVLSAQLITAPTGRPREIRN 109
RS L F VAT+ + P F RP IP TA + P S + + P PR R
Sbjct: 47 RSVPLTFRLVATLSTVLPIPALTFARP-IPGTARS-----PTPSGRPVP-PGAPPRFRRR 99
Query: 108 FAPAEPPRPL 79
APA PPRP+
Sbjct: 100 TAPALPPRPV 109
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 926,478,853
Number of Sequences: 1657284
Number of extensions: 17307431
Number of successful extensions: 44589
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 42756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44556
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 122384806943
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -