Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_H18
(1242 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 39 0.009
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 34 0.27
01_01_0895 + 7052118-7053110,7053249-7053252,7054450-7055189 32 1.1
06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979 31 1.4
12_02_1174 - 26696869-26698191 31 1.9
08_02_0758 + 20848078-20849579,20849660-20849850,20849944-208501... 30 3.3
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 30 3.3
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 30 3.3
11_04_0415 - 17395988-17396161,17397349-17397444,17397489-173980... 30 4.3
08_01_0059 - 394001-394708 29 5.7
07_01_0479 + 3606663-3607448 29 5.7
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037... 29 5.7
03_06_0710 + 35676497-35677204,35677837-35677921,35679722-35679798 29 5.7
07_03_1136 + 24218601-24218734,24218769-24219906 29 7.6
09_02_0194 - 5641920-5642867,5642895-5642983,5643049-5643280 24 8.7
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 38.7 bits (86), Expect = 0.009
Identities = 21/57 (36%), Positives = 21/57 (36%)
Frame = +2
Query: 701 PPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTPPGPPXXXPRGKXKXXXXFPLGKGG 871
PPP K P G PP K P P P PP P G K P KGG
Sbjct: 329 PPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGG 385
Score = 30.7 bits (66), Expect = 2.5
Identities = 28/98 (28%), Positives = 28/98 (28%)
Frame = +2
Query: 467 PPPXGXGGXXLGXPPPPPXXKPRXPXXXXXXXXXXXXXGXXGXPXKXGXXPXKXFXXKGP 646
PPP PPPPP K P G P G P KGP
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPP--------PPPPKGPPPPPPAKGPPPPP--PPKGP 362
Query: 647 KRXXXPKRXXGGGFXXXXPPPXKKKKXXPXXGGGXPPG 760
P GG PPP K P G P G
Sbjct: 363 S--PPPPPPPGGKKGGPPPPPPKGGASRPPAAPGVPTG 398
Score = 30.7 bits (66), Expect = 2.5
Identities = 21/58 (36%), Positives = 22/58 (37%)
Frame = +2
Query: 701 PPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTPPGPPXXXPRGKXKXXXXFPLGKGGG 874
PPP K P PP P P K PP PP P+G P GK GG
Sbjct: 326 PPPPPPPKAAPP-----PPPPKGPPPPPPAKGPPPPPP--PKGPSPPPPPPPGGKKGG 376
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 33.9 bits (74), Expect = 0.27
Identities = 31/116 (26%), Positives = 33/116 (28%), Gaps = 1/116 (0%)
Frame = +2
Query: 467 PPPXGXGGXXLGXPPPPPXXKPRXPXXXXXXXXXXXXXGXXGXPXKXG-XXPXKXFXXKG 643
PPP G G PPPPP G P G P G
Sbjct: 1109 PPPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAG 1168
Query: 644 PKRXXXPKRXXGGGFXXXXPPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTPPGPP 811
+ P GG PPP + G PPG P P P GPP
Sbjct: 1169 FRGGTPPPNAHGG----VAPPPPPPRGHGGVGGPPTPPGAPAPP--MPPGVPGGPP 1218
Score = 29.1 bits (62), Expect = 7.6
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = +2
Query: 467 PPPXGXGGXXLGXPPPPPXXKPRXPXXXXXXXXXXXXXGXXGXPXKXG 610
PPP G GG +G PP PP P P G G P G
Sbjct: 1187 PPPRGHGG--VGGPPTPPG-APAPPMPPGVPGGPPPPPGGRGLPAPPG 1231
>01_01_0895 + 7052118-7053110,7053249-7053252,7054450-7055189
Length = 578
Score = 31.9 bits (69), Expect = 1.1
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 458 KKTPPPXGXGGXXLGXPPPPP 520
K+ PPP G GG L PP PP
Sbjct: 33 KRPPPPCGDGGRRLPLPPSPP 53
>06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979
Length = 304
Score = 31.5 bits (68), Expect = 1.4
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Frame = +2
Query: 701 PPPXKKKKXXPXXGGGXPPGXXKKPRXXPXK-TPPGPPXXXPRGKXKXXXXFPLGKGGG 874
PPP + K P PP K P+ + PP PP P+G P G G G
Sbjct: 59 PPPPQPAKEPP------PPTKPKHPKPKQQQHPPPPPPQKPPQGSTNLSLPNPSGSGSG 111
>12_02_1174 - 26696869-26698191
Length = 440
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +2
Query: 701 PPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTPPGPPXXXP 823
PPP P PP KP+ P PP PP P
Sbjct: 155 PPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPP 195
>08_02_0758 +
20848078-20849579,20849660-20849850,20849944-20850179,
20850254-20850973
Length = 882
Score = 30.3 bits (65), Expect = 3.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 460 KNPPPXGXXGXXFGXPPPXPP 522
KNPPP G +G PPP PP
Sbjct: 436 KNPPP-NLKGQCYGQPPPPPP 455
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 30.3 bits (65), Expect = 3.3
Identities = 28/119 (23%), Positives = 30/119 (25%)
Frame = +2
Query: 467 PPPXGXGGXXLGXPPPPPXXKPRXPXXXXXXXXXXXXXGXXGXPXKXGXXPXKXFXXKGP 646
PPP G G PP PP P P P P GP
Sbjct: 12 PPPQG------GFPPQPPPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPP---PGP 62
Query: 647 KRXXXPKRXXGGGFXXXXPPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTPPGPPXXXP 823
P+ G G PP + P G P PP PP P
Sbjct: 63 PPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAP 121
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 30.3 bits (65), Expect = 3.3
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +2
Query: 701 PPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTPPGPPXXXP 823
PPP + P PP P P TPP PP P
Sbjct: 1137 PPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSP 1177
>11_04_0415 -
17395988-17396161,17397349-17397444,17397489-17398026,
17398106-17398422
Length = 374
Score = 29.9 bits (64), Expect = 4.3
Identities = 19/43 (44%), Positives = 19/43 (44%)
Frame = -1
Query: 828 PRGXXXGGPGGVFXGXXRGFFXXPGGXPPPXXGXFFFFFXGGG 700
PRG GGP G G RGF GG P G F GGG
Sbjct: 8 PRGGGGGGPRGFGGGGPRGF---GGGGPRGFGGGGPRGFGGGG 47
>08_01_0059 - 394001-394708
Length = 235
Score = 29.5 bits (63), Expect = 5.7
Identities = 13/41 (31%), Positives = 15/41 (36%)
Frame = +2
Query: 701 PPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTPPGPPXXXP 823
PPP ++ P PP P P PP PP P
Sbjct: 2 PPPPPPRRAPPPPATPPPPPRRAPPPPSPPIRPPPPPTPRP 42
>07_01_0479 + 3606663-3607448
Length = 261
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +2
Query: 701 PPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTPPGPPXXXP 823
PPP + P GG PPG +P P PG P P
Sbjct: 212 PPPMGPPQVRPGMPGGPPPG--MRPGMPPPPFRPGMPPPPP 250
>04_04_0233 +
23801944-23802598,23802914-23803047,23803548-23803730,
23804145-23804318
Length = 381
Score = 29.5 bits (63), Expect = 5.7
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +2
Query: 464 TPPPXGXGGXXLGXPPPPPXXKPRXP 541
+PPP +G PPPPP P P
Sbjct: 14 SPPPFSSRPRVVGPPPPPPSDPPPPP 39
>03_06_0710 + 35676497-35677204,35677837-35677921,35679722-35679798
Length = 289
Score = 29.5 bits (63), Expect = 5.7
Identities = 30/114 (26%), Positives = 32/114 (28%)
Frame = +2
Query: 458 KKTPPPXGXGGXXLGXPPPPPXXKPRXPXXXXXXXXXXXXXGXXGXPXKXGXXPXKXFXX 637
+ TP P PPPPP R G K K
Sbjct: 33 RSTPKPRKNPNPKEEAPPPPPANNKRLNPQGGSNRKKKADAGTPSKKPKRQPPEPKPRKH 92
Query: 638 KGPKRXXXPKRXXGGGFXXXXPPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTP 799
KG K P R G G P P KKKK P K+ P TP
Sbjct: 93 KGAK-SEKPHRVSGEG---EKPTPTKKKKKKE---SSKEPKREKQQASAPMSTP 139
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.1 bits (62), Expect = 7.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 519 GGGGGXPKXXPPXPXGGG 466
GGGGG P PP GGG
Sbjct: 111 GGGGGGPPSLPPGAGGGG 128
>09_02_0194 - 5641920-5642867,5642895-5642983,5643049-5643280
Length = 422
Score = 24.2 bits (50), Expect(2) = 8.7
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 506 PPPPPXXKPRXP 541
PPPPP PR P
Sbjct: 409 PPPPPEDPPRAP 420
Score = 23.0 bits (47), Expect(2) = 8.7
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +2
Query: 488 GXXLGXPPPPPXXKP 532
G G PPPPP P
Sbjct: 402 GHGYGYPPPPPPEDP 416
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.152 0.509
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,251,674
Number of Sequences: 37544
Number of extensions: 481637
Number of successful extensions: 2137
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1809
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3829445508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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