Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_H18
(1242 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.059
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.059
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.059
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.18
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 34 0.18
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.18
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 3.9
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 3.9
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 30 3.9
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 3.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 3.9
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 30 3.9
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 30 3.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 3.9
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 5.2
AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical ... 29 5.2
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 29 9.0
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 29 9.0
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 29 9.0
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.9 bits (79), Expect = 0.059
Identities = 26/104 (25%), Positives = 28/104 (26%)
Frame = +2
Query: 500 GXPPPPPXXKPRXPXXXXXXXXXXXXXGXXGXPXKXGXXPXKXFXXKGPKRXXXPKRXXG 679
G PPPPP K P G P P P P
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 294
Query: 680 GGFXXXXPPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTPPGPP 811
G PPP + P G PP P +PP PP
Sbjct: 295 GS-----PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
Score = 35.9 bits (79), Expect = 0.059
Identities = 34/124 (27%), Positives = 39/124 (31%), Gaps = 5/124 (4%)
Frame = +2
Query: 467 PPPXGXGGXXL---GXPPPPPXXKPRXPXXXXXXXXXXXXXGXXGXPXKXGXXPXKXFXX 637
PPP G L G PPPPP P G P G P
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGS--PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 296
Query: 638 KGPKRXXXPKRXXGGGFXXXXPPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTPP--GPP 811
P P G PPP + P G G PP ++ R P ++PP PP
Sbjct: 297 PPP-----PPPPRGSPPTGSLPPP-QAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 350
Query: 812 XXXP 823
P
Sbjct: 351 TGSP 354
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Frame = +2
Query: 701 PPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKT--PPGPPXXXP 823
PPP K P G G PP P +T PP PP P
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP 280
Score = 29.1 bits (62), Expect = 6.8
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +2
Query: 701 PPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTPPGPPXXXPRGKXKXXXXFPLGKGG 871
PPP P G PP P +PP PP PRG P GG
Sbjct: 265 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP--PRGSPPTGSLPPPQAGG 319
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.9 bits (79), Expect = 0.059
Identities = 26/104 (25%), Positives = 28/104 (26%)
Frame = +2
Query: 500 GXPPPPPXXKPRXPXXXXXXXXXXXXXGXXGXPXKXGXXPXKXFXXKGPKRXXXPKRXXG 679
G PPPPP K P G P P P P
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 315
Query: 680 GGFXXXXPPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTPPGPP 811
G PPP + P G PP P +PP PP
Sbjct: 316 GS-----PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
Score = 35.9 bits (79), Expect = 0.059
Identities = 34/124 (27%), Positives = 39/124 (31%), Gaps = 5/124 (4%)
Frame = +2
Query: 467 PPPXGXGGXXL---GXPPPPPXXKPRXPXXXXXXXXXXXXXGXXGXPXKXGXXPXKXFXX 637
PPP G L G PPPPP P G P G P
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGS--PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 317
Query: 638 KGPKRXXXPKRXXGGGFXXXXPPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTPP--GPP 811
P P G PPP + P G G PP ++ R P ++PP PP
Sbjct: 318 PPP-----PPPPRGSPPTGSLPPP-QAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 371
Query: 812 XXXP 823
P
Sbjct: 372 TGSP 375
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Frame = +2
Query: 701 PPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKT--PPGPPXXXP 823
PPP K P G G PP P +T PP PP P
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP 301
Score = 29.1 bits (62), Expect = 6.8
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +2
Query: 701 PPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTPPGPPXXXPRGKXKXXXXFPLGKGG 871
PPP P G PP P +PP PP PRG P GG
Sbjct: 286 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP--PRGSPPTGSLPPPQAGG 340
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.9 bits (79), Expect = 0.059
Identities = 26/104 (25%), Positives = 28/104 (26%)
Frame = +2
Query: 500 GXPPPPPXXKPRXPXXXXXXXXXXXXXGXXGXPXKXGXXPXKXFXXKGPKRXXXPKRXXG 679
G PPPPP K P G P P P P
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 300
Query: 680 GGFXXXXPPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTPPGPP 811
G PPP + P G PP P +PP PP
Sbjct: 301 GS-----PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
Score = 35.9 bits (79), Expect = 0.059
Identities = 34/124 (27%), Positives = 39/124 (31%), Gaps = 5/124 (4%)
Frame = +2
Query: 467 PPPXGXGGXXL---GXPPPPPXXKPRXPXXXXXXXXXXXXXGXXGXPXKXGXXPXKXFXX 637
PPP G L G PPPPP P G P G P
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGS--PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 302
Query: 638 KGPKRXXXPKRXXGGGFXXXXPPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTPP--GPP 811
P P G PPP + P G G PP ++ R P ++PP PP
Sbjct: 303 PPP-----PPPPRGSPPTGSLPPP-QAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 356
Query: 812 XXXP 823
P
Sbjct: 357 TGSP 360
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Frame = +2
Query: 701 PPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKT--PPGPPXXXP 823
PPP K P G G PP P +T PP PP P
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP 286
Score = 29.1 bits (62), Expect = 6.8
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +2
Query: 701 PPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTPPGPPXXXPRGKXKXXXXFPLGKGG 871
PPP P G PP P +PP PP PRG P GG
Sbjct: 271 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP--PRGSPPTGSLPPPQAGG 325
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.3 bits (75), Expect = 0.18
Identities = 26/99 (26%), Positives = 27/99 (27%), Gaps = 2/99 (2%)
Frame = +2
Query: 467 PPPXGXGGXXLGXPPPPPXXKPRXPXXXXXXXXXXXXXGXXGXPXKXG--XXPXKXFXXK 640
PPP G PPPPP P P G P G P
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPP--GMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYP 344
Query: 641 GPKRXXXPKRXXGGGFXXXXPPPXKKKKXXPXXGGGXPP 757
G P R G PPP + P G PP
Sbjct: 345 GGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPP 383
Score = 32.3 bits (70), Expect = 0.73
Identities = 30/117 (25%), Positives = 31/117 (26%)
Frame = +2
Query: 479 GXGGXXLGXPPPPPXXKPRXPXXXXXXXXXXXXXGXXGXPXKXGXXPXKXFXXKGPKRXX 658
G G PPPPP P P P G P P
Sbjct: 255 GYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPP----PPPSSGMWP--------PPPPP 302
Query: 659 XPKRXXGGGFXXXXPPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTPPGPPXXXPRG 829
P R G PPP + P GG PP R PP PP G
Sbjct: 303 PPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG 359
Score = 29.9 bits (64), Expect = 3.9
Identities = 27/115 (23%), Positives = 28/115 (24%)
Frame = +2
Query: 467 PPPXGXGGXXLGXPPPPPXXKPRXPXXXXXXXXXXXXXGXXGXPXKXGXXPXKXFXXKGP 646
PPP PPPPP P G G P G
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGM 333
Query: 647 KRXXXPKRXXGGGFXXXXPPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTPPGPP 811
P GG PPP + P PP P PP PP
Sbjct: 334 PPPPPPGMRYPGGMPP--PPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 386
Score = 29.9 bits (64), Expect = 3.9
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = +2
Query: 662 PKRXXGGGFXXXXPPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTPPGPPXXXP 823
P R G PPP + GG PP + P P PP PP P
Sbjct: 322 PSRFGPPGMGGMPPPPPPGMRYP---GGMPPPPPPRYPSAGPGMYPPPPPSRPP 372
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 34.3 bits (75), Expect = 0.18
Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Frame = +2
Query: 644 PKRXXXPKRXXGGGFXXXXPPPXKKKKXXPXXGGGX--PPGXXKKPRXXPXKTPPGP-PX 814
P P++ GG PPP + + P PP P+ P +TPP P P
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPR 181
Query: 815 XXPR 826
PR
Sbjct: 182 NPPR 185
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.18
Identities = 26/99 (26%), Positives = 27/99 (27%), Gaps = 2/99 (2%)
Frame = +2
Query: 467 PPPXGXGGXXLGXPPPPPXXKPRXPXXXXXXXXXXXXXGXXGXPXKXG--XXPXKXFXXK 640
PPP G PPPPP P P G P G P
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPP--GMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYP 354
Query: 641 GPKRXXXPKRXXGGGFXXXXPPPXKKKKXXPXXGGGXPP 757
G P R G PPP + P G PP
Sbjct: 355 GGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPP 393
Score = 32.3 bits (70), Expect = 0.73
Identities = 30/117 (25%), Positives = 31/117 (26%)
Frame = +2
Query: 479 GXGGXXLGXPPPPPXXKPRXPXXXXXXXXXXXXXGXXGXPXKXGXXPXKXFXXKGPKRXX 658
G G PPPPP P P P G P P
Sbjct: 265 GYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPP----PPPSSGMWP--------PPPPP 312
Query: 659 XPKRXXGGGFXXXXPPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTPPGPPXXXPRG 829
P R G PPP + P GG PP R PP PP G
Sbjct: 313 PPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG 369
Score = 29.9 bits (64), Expect = 3.9
Identities = 27/115 (23%), Positives = 28/115 (24%)
Frame = +2
Query: 467 PPPXGXGGXXLGXPPPPPXXKPRXPXXXXXXXXXXXXXGXXGXPXKXGXXPXKXFXXKGP 646
PPP PPPPP P G G P G
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGM 343
Query: 647 KRXXXPKRXXGGGFXXXXPPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTPPGPP 811
P GG PPP + P PP P PP PP
Sbjct: 344 PPPPPPGMRYPGGMPP--PPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 396
Score = 29.9 bits (64), Expect = 3.9
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = +2
Query: 662 PKRXXGGGFXXXXPPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTPPGPPXXXP 823
P R G PPP + GG PP + P P PP PP P
Sbjct: 332 PSRFGPPGMGGMPPPPPPGMRYP---GGMPPPPPPRYPSAGPGMYPPPPPSRPP 382
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.9 bits (64), Expect = 3.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 467 PPPXGXGGXXLGXPPPPPXXKP 532
PPP G G PPPPP P
Sbjct: 636 PPPMGLPAVGAGAPPPPPPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.9 bits (64), Expect = 3.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 467 PPPXGXGGXXLGXPPPPPXXKP 532
PPP G G PPPPP P
Sbjct: 462 PPPMGLPAVGAGAPPPPPPPPP 483
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 29.9 bits (64), Expect = 3.9
Identities = 32/117 (27%), Positives = 35/117 (29%), Gaps = 2/117 (1%)
Frame = +2
Query: 467 PPPXGXGGXXLGXPPP-PPXXK-PRXPXXXXXXXXXXXXXGXXGXPXKXGXXPXKXFXXK 640
P P G G L PPP PP K P P G G G
Sbjct: 134 PGPPGRDGALLPGPPPKPPCQKCPPGPPGPAGPPGPKGLPGPQGDAGTSGQDGVPGLP-- 191
Query: 641 GPKRXXXPKRXXGGGFXXXXPPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTPPGPP 811
GP P+ G P + K G PPG P + PPGPP
Sbjct: 192 GPPGPSGPQ--GAPGVPGEKGPTGEPGKVI----NGAPPGPPGPPGPPGPQGPPGPP 242
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 3.9
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 701 PPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTPPGPPXXXPRG 829
PPP P GG PP P P PP PP P G
Sbjct: 742 PPPPPPPGGLPPISGGPPP-----PPPPPGGCPPPPPPPPPGG 779
Score = 29.5 bits (63), Expect = 5.2
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 467 PPPXGXGGXXLGXPPPPP 520
PPP GG G PPPPP
Sbjct: 772 PPPPPPGGFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 3.9
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 701 PPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTPPGPPXXXPRG 829
PPP P GG PP P P PP PP P G
Sbjct: 742 PPPPPPPGGLPPISGGPPP-----PPPPPGGCPPPPPPPPPGG 779
Score = 29.5 bits (63), Expect = 5.2
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 467 PPPXGXGGXXLGXPPPPP 520
PPP GG G PPPPP
Sbjct: 772 PPPPPPGGFKGGPPPPPP 789
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.9 bits (64), Expect = 3.9
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 467 PPPXGXGGXXLGXPPPPP 520
PPP G GG PPPPP
Sbjct: 664 PPPGGLGGFMPPPPPPPP 681
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.9 bits (64), Expect = 3.9
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 467 PPPXGXGGXXLGXPPPPP 520
PPP G GG PPPPP
Sbjct: 664 PPPGGLGGFMPPPPPPPP 681
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 3.9
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 701 PPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTPPGPPXXXPRG 829
PPP P GG PP P P PP PP P G
Sbjct: 325 PPPPPPPGGLPPISGGPPP-----PPPPPGGCPPPPPPPPPGG 362
Score = 29.5 bits (63), Expect = 5.2
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 467 PPPXGXGGXXLGXPPPPP 520
PPP GG G PPPPP
Sbjct: 355 PPPPPPGGFKGGPPPPPP 372
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = -1
Query: 321 FFXPPFFXGXXPXXXXFFXXXGPXPPPX-GGXPPXXXFFYPP 199
F PP G P F P PPP GG PP F P
Sbjct: 73 FIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAP 114
>AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical
protein Y75B8A.8 protein.
Length = 715
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
Frame = -1
Query: 531 GFXXGGGGGXPKXXP---PXPXGGGV 463
G GGGGG P+ P P P GGGV
Sbjct: 13 GGAGGGGGGPPRGPPQQPPQPQGGGV 38
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 28.7 bits (61), Expect = 9.0
Identities = 20/66 (30%), Positives = 22/66 (33%), Gaps = 1/66 (1%)
Frame = +2
Query: 677 GGGFXXXXPPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTPPGPPXXXPRGKXKXXXXF- 853
G G PP + P G P P PPGPP PRG+ F
Sbjct: 210 GTGIKGPPGPPGPRGPKGPPGSNGLPSQNSGPPGPIGEMGPPGPP--GPRGEPGPPGPFG 267
Query: 854 PLGKGG 871
P G G
Sbjct: 268 PPGDSG 273
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 28.7 bits (61), Expect = 9.0
Identities = 20/66 (30%), Positives = 22/66 (33%), Gaps = 1/66 (1%)
Frame = +2
Query: 677 GGGFXXXXPPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTPPGPPXXXPRGKXKXXXXF- 853
G G PP + P G P P PPGPP PRG+ F
Sbjct: 210 GTGIKGPPGPPGPRGPKGPPGSNGLPSQNSGPPGPIGEMGPPGPP--GPRGEPGPPGPFG 267
Query: 854 PLGKGG 871
P G G
Sbjct: 268 PPGDSG 273
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 28.7 bits (61), Expect = 9.0
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = +2
Query: 680 GGFXXXXPPPXKKKKXXPXXGGGXPPGXXKKPRXXPXKTPPGPPXXXPRGKXKXXXXFPL 859
GGF P P K P G G P P +P GP P G P
Sbjct: 923 GGFIPPIPVPNPIPKPNPGPGPGPP--SPNGPSDPNKPSPNGPSPNGPNGPSDPNKPGPS 980
Query: 860 GKGG 871
G G
Sbjct: 981 GPNG 984
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.152 0.509
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,878,760
Number of Sequences: 27780
Number of extensions: 307520
Number of successful extensions: 1356
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3443371140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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