Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_H17
         (1263 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ...    58   6e-07
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ...    36   2.9  

>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
           root|Rep: Putative uncharacterized protein - Salmonella
           typhimurium
          Length = 127

 Score = 57.6 bits (133), Expect = 6e-07
 Identities = 32/87 (36%), Positives = 33/87 (37%)
 Frame = +1

Query: 712 PGXSFTKXXXXXXGGXXRXXXXDPXGXPLKAPXCALLXRPXXXPDTXPXXXLRXGWXXXI 891
           P  S TK      GG  R    D    PL+AP CALL RP   PDT P   LR  W   I
Sbjct: 22  PLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLI 81

Query: 892 PXXXGXXXXXRXXXPXXGXVXXPPVXP 972
               G     R   P       PP  P
Sbjct: 82  AHAVGISVRCRSFAPSWAVCTNPPFSP 108


>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides capillosus ATCC 29799|Rep: Putative
           uncharacterized protein - Bacteroides capillosus ATCC
           29799
          Length = 37

 Score = 35.5 bits (78), Expect = 2.9
 Identities = 16/32 (50%), Positives = 18/32 (56%)
 Frame = +3

Query: 810 VRXPXPTXXXTGYXXAFXPSGXVXLXHTXXXR 905
           +R P PT   TGY  AF PSG V L H+   R
Sbjct: 1   MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCR 32


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 533,211,879
Number of Sequences: 1657284
Number of extensions: 6004665
Number of successful extensions: 13928
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13288
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 128364952603
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)