Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_H16
(1185 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9Y3I0 Cluster: UPF0027 protein C22orf28; n=54; Eukaryo... 440 e-122
UniRef50_UPI0000499389 Cluster: conserved hypothetical protein; ... 235 2e-60
UniRef50_A2FSC4 Cluster: Putative uncharacterized protein; n=7; ... 227 4e-58
UniRef50_Q8ZY09 Cluster: UPF0027 protein PAE0998; n=26; cellular... 214 4e-54
UniRef50_Q6LXF9 Cluster: UPF0027 protein MMP1392; n=9; cellular ... 210 7e-53
UniRef50_Q5XQ66 Cluster: Putative uncharacterized protein; n=5; ... 206 1e-51
UniRef50_Q8SWJ2 Cluster: Putative uncharacterized protein ECU01_... 191 3e-47
UniRef50_A1I791 Cluster: RtcB protein; n=6; cellular organisms|R... 177 3e-43
UniRef50_Q5ZTG1 Cluster: Replication factor C subunit; n=17; Bac... 177 6e-43
UniRef50_Q8KET1 Cluster: Putative uncharacterized protein; n=5; ... 174 4e-42
UniRef50_Q6L1G2 Cluster: RtcB protein; n=3; cellular organisms|R... 173 7e-42
UniRef50_Q978S0 Cluster: Putative uncharacterized protein TVG139... 168 2e-40
UniRef50_P71930 Cluster: UPF0027 protein Rv2631/MT2707; n=19; ce... 163 6e-39
UniRef50_Q30ZL0 Cluster: Putative uncharacterized protein; n=1; ... 159 1e-37
UniRef50_A2RQD0 Cluster: RtcB like protein; n=3; root|Rep: RtcB ... 158 3e-37
UniRef50_A5D1V8 Cluster: Uncharacterized conserved protein; n=4;... 151 5e-35
UniRef50_Q2AIS2 Cluster: Putative uncharacterized protein; n=1; ... 146 7e-34
UniRef50_Q9V168 Cluster: UPF0027 protein PYRAB05600 [Contains: P... 142 2e-32
UniRef50_Q2RZP0 Cluster: Uncharacterized protein family UPF0027;... 138 2e-31
UniRef50_Q58095 Cluster: UPF0027 protein MJ0682 [Contains: Mja h... 132 1e-29
UniRef50_Q8TUS2 Cluster: UPF0027 protein MK1682 [Contains: Mka h... 120 1e-25
UniRef50_Q7NY50 Cluster: Putative uncharacterized protein; n=5; ... 74 6e-12
UniRef50_A4XIW5 Cluster: Putative uncharacterized protein; n=1; ... 69 2e-10
UniRef50_Q09CZ4 Cluster: RtcB protein; n=2; Cystobacterineae|Rep... 64 5e-09
UniRef50_P46850 Cluster: Protein rtcB; n=73; cellular organisms|... 64 5e-09
UniRef50_A6FXH5 Cluster: Putative uncharacterized protein; n=1; ... 62 4e-08
UniRef50_Q72DS6 Cluster: Putative uncharacterized protein; n=2; ... 55 4e-08
UniRef50_Q9KBY5 Cluster: BH1789 protein; n=5; Bacteria|Rep: BH17... 61 6e-08
UniRef50_Q08WH4 Cluster: RtcB protein; n=3; Bacteria|Rep: RtcB p... 55 4e-06
UniRef50_Q4KAP7 Cluster: RtcB protein; n=2; Bacteria|Rep: RtcB p... 54 1e-05
UniRef50_Q7URB3 Cluster: Putative uncharacterized protein; n=2; ... 53 2e-05
UniRef50_Q08W43 Cluster: Rtcb protein; n=9; Bacteria|Rep: Rtcb p... 53 2e-05
UniRef50_Q3J9M5 Cluster: Putative uncharacterized protein; n=5; ... 52 2e-05
UniRef50_Q8I5J3 Cluster: Putative uncharacterized protein; n=1; ... 52 3e-05
UniRef50_A5K021 Cluster: Putative uncharacterized protein; n=1; ... 51 7e-05
UniRef50_A1ZPN4 Cluster: RtcB protein; n=2; Bacteria|Rep: RtcB p... 48 5e-04
UniRef50_UPI00006A2AF4 Cluster: UPI00006A2AF4 related cluster; n... 46 0.001
UniRef50_A1K1J2 Cluster: RtcB protein; n=7; Bacteria|Rep: RtcB p... 46 0.002
UniRef50_Q1FKT8 Cluster: Putative uncharacterized protein; n=1; ... 45 0.003
UniRef50_Q8YRC2 Cluster: All3526 protein; n=6; cellular organism... 45 0.004
UniRef50_Q389M0 Cluster: Putative uncharacterized protein; n=1; ... 44 0.010
UniRef50_A7BNF2 Cluster: Putative uncharacterized protein; n=1; ... 43 0.014
UniRef50_A6PNP2 Cluster: Putative uncharacterized protein; n=1; ... 43 0.014
UniRef50_Q185T6 Cluster: Putative uncharacterized protein; n=3; ... 42 0.024
UniRef50_Q0UMZ4 Cluster: Putative uncharacterized protein; n=1; ... 42 0.024
UniRef50_Q4TC88 Cluster: Chromosome undetermined SCAF7042, whole... 41 0.054
UniRef50_Q8NLE1 Cluster: Uncharacterized ACR; n=7; Actinomycetal... 41 0.054
UniRef50_Q7QTD7 Cluster: GLP_9_6218_4470; n=1; Giardia lamblia A... 41 0.072
UniRef50_Q1K006 Cluster: Putative uncharacterized protein; n=1; ... 40 0.095
UniRef50_Q8RJY8 Cluster: ORF8, ORF7, ORF6, ORF5, ORF4, ORF3, ORF... 40 0.13
UniRef50_Q8A7R9 Cluster: Protein rtcB; n=7; cellular organisms|R... 40 0.17
UniRef50_A6ELD5 Cluster: Protein rtcB; n=4; Bacteroidetes|Rep: P... 40 0.17
UniRef50_A6DJD1 Cluster: Putative uncharacterized protein; n=1; ... 40 0.17
UniRef50_A3RTM5 Cluster: RtcB protein; n=37; Proteobacteria|Rep:... 40 0.17
UniRef50_Q73PJ5 Cluster: Putative uncharacterized protein; n=1; ... 39 0.22
UniRef50_Q30KY5 Cluster: Gp160; n=4; root|Rep: Gp160 - Listeria ... 38 0.38
UniRef50_A3IXW8 Cluster: Putative uncharacterized protein; n=3; ... 38 0.51
UniRef50_Q9RX85 Cluster: RtcB protein; n=1; Deinococcus radiodur... 38 0.67
UniRef50_A0YUJ4 Cluster: Putative uncharacterized protein; n=1; ... 38 0.67
UniRef50_A4X6J3 Cluster: Putative uncharacterized protein; n=1; ... 37 0.89
UniRef50_A0W7X6 Cluster: Putative uncharacterized protein; n=1; ... 37 0.89
UniRef50_Q21NY4 Cluster: Putative uncharacterized protein; n=1; ... 36 2.0
UniRef50_A5EB30 Cluster: Putative uncharacterized protein; n=2; ... 36 2.0
UniRef50_A6EDZ6 Cluster: Protein rtcB; n=1; Pedobacter sp. BAL39... 36 2.7
UniRef50_A1FGD7 Cluster: Putative uncharacterized protein; n=1; ... 36 2.7
UniRef50_Q97DT9 Cluster: Uncharacterized conserved protein, RtcB... 35 4.7
UniRef50_Q2KCK7 Cluster: Ribose ABC transporter, ATP-binding pro... 35 4.7
UniRef50_Q0LEE1 Cluster: Putative uncharacterized protein; n=3; ... 35 4.7
UniRef50_Q8A557 Cluster: Putative uncharacterized protein; n=2; ... 34 8.3
UniRef50_Q325Q3 Cluster: Putative uncharacterized protein; n=1; ... 34 8.3
UniRef50_Q5TSZ5 Cluster: ENSANGP00000026590; n=3; Culicidae|Rep:... 34 8.3
>UniRef50_Q9Y3I0 Cluster: UPF0027 protein C22orf28; n=54;
Eukaryota|Rep: UPF0027 protein C22orf28 - Homo sapiens
(Human)
Length = 505
Score = 440 bits (1084), Expect = e-122
Identities = 203/252 (80%), Positives = 222/252 (88%)
Frame = +3
Query: 198 RQYHXALKSLEKINPYCWSIKKGFQPNMXVEGVFYVNSTLEQLMLEELRNCCXPGMSGGF 377
R Y+ L+ LEKIN CW IKKGF PNM VEGVFYVN LE+LM EELRN C G GGF
Sbjct: 3 RSYNDELQFLEKINKNCWRIKKGFVPNMQVEGVFYVNDALEKLMFEELRNACRGGGVGGF 62
Query: 378 LPGVKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINC 557
LP +KQI NVAALPGIV RS+GLPDVHSGYGFAIGNMAAFDM+DP+++VSPGGVGFDINC
Sbjct: 63 LPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDPEAVVSPGGVGFDINC 122
Query: 558 GVRLLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLRE 737
GVRLLRTNL E DV P+KEQLAQ++FDHIPVGVGSKG+IPMNA+DLEEALEMG+DWSLRE
Sbjct: 123 GVRLLRTNLDESDVQPVKEQLAQAMFDHIPVGVGSKGVIPMNAKDLEEALEMGVDWSLRE 182
Query: 738 GYVWAEDKEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVDEIXDKYA 917
GY WAEDKEHCEEYGRML ADP+KVS RAKKRGLPQLGTLGAGNHYAEIQVVDEI ++YA
Sbjct: 183 GYAWAEDKEHCEEYGRMLQADPNKVSARAKKRGLPQLGTLGAGNHYAEIQVVDEIFNEYA 242
Query: 918 AGKMGIESXGQV 953
A KMGI+ GQV
Sbjct: 243 AKKMGIDHKGQV 254
Score = 36.7 bits (81), Expect = 1.2
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2
Query: 956 VMIHSGSRGLGHQVXXDA 1009
VMIHSGSRGLGHQV DA
Sbjct: 256 VMIHSGSRGLGHQVATDA 273
>UniRef50_UPI0000499389 Cluster: conserved hypothetical protein;
n=2; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 535
Score = 235 bits (575), Expect = 2e-60
Identities = 114/233 (48%), Positives = 151/233 (64%)
Frame = +3
Query: 255 IKKGFQPNMXVEGVFYVNSTLEQLMLEELRNCCXPGMSGGFLPGVKQIANVAALPGIVGR 434
IKKGF M + + N L L+ E+ +S + V+Q AN A LPG+VG
Sbjct: 60 IKKGFVEGMNGDAKIFCNDDLLNLLTFEM----IKDISNNYPSCVRQTANAATLPGVVG- 114
Query: 435 SVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLLRTNLHEKDVLPIKE 614
S+ +PD HSGYGF+IG + A +DDP++++ PGGVGFDINCGVRL+RTNL +D+ K
Sbjct: 115 SLAMPDAHSGYGFSIGGVVAMRLDDPEAVICPGGVGFDINCGVRLIRTNLQREDIEQHKA 174
Query: 615 QLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYVWAEDKEHCEEYGRMLN 794
+LA LF IP GVG++ I + D + ++ G+++ + GY W ED HCEE+G++ N
Sbjct: 175 RLADELFKQIPSGVGTQAQIAFSPEDFDSIMKEGLEFLVENGYAWEEDLNHCEEHGKIAN 234
Query: 795 ADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVDEIXDKYAAGKMGIESXGQV 953
ADPS VS AK RG Q+GTLG+GNHY E+QVVDEI D AA MGI GQV
Sbjct: 235 ADPSLVSNSAKSRGYKQVGTLGSGNHYLEVQVVDEIMDVEAAKAMGITEIGQV 287
>UniRef50_A2FSC4 Cluster: Putative uncharacterized protein; n=7;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 518
Score = 227 bits (555), Expect = 4e-58
Identities = 117/245 (47%), Positives = 156/245 (63%), Gaps = 2/245 (0%)
Frame = +3
Query: 225 LEKINPYCWSIKKGFQPNMXVEGVFYVNSTLEQLMLEELRNCCXPGMSGGFLPGVKQIAN 404
+++I P + I GF PNM V G FY + + +EL N G LP + QI+
Sbjct: 32 IKEIKPCVYEIPIGFVPNMKVPGYFYSTPEMAKYAFDELENWMSNRNQG--LPSILQISF 89
Query: 405 VAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLLRTNL 584
VA LPGI S G+PD+HSGYGF+IG +AAFD DP +++SPGGVG+DINCGVRL+ TNL
Sbjct: 90 VATLPGITKGSFGMPDMHSGYGFSIGGVAAFDTTDPDALISPGGVGYDINCGVRLMTTNL 149
Query: 585 HEKDVLPIKEQLAQSLFDHIPVGVGSK--GIIPMNARDLEEALEMGMDWSLREGYVWAED 758
++V P+K++L + L+ +IPVGVG K GI P R L + + G W+L G+ ED
Sbjct: 150 TWEEVEPVKKELVEKLYKYIPVGVGGKLDGICP--CRHLRDVMLKGAGWALENGFAVQED 207
Query: 759 KEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVDEIXDKYAAGKMGIE 938
++CEE G + ADPS +S R RG QLGT+GAGNHY E+Q VD+I D+ A M +
Sbjct: 208 IDNCEENGCLKGADPSLISDRTIARGTGQLGTVGAGNHYIEVQRVDKILDEEKARVMDLH 267
Query: 939 SXGQV 953
GQV
Sbjct: 268 E-GQV 271
>UniRef50_Q8ZY09 Cluster: UPF0027 protein PAE0998; n=26; cellular
organisms|Rep: UPF0027 protein PAE0998 - Pyrobaculum
aerophilum
Length = 484
Score = 214 bits (522), Expect = 4e-54
Identities = 111/243 (45%), Positives = 150/243 (61%)
Frame = +3
Query: 225 LEKINPYCWSIKKGFQPNMXVEGVFYVNSTLEQLMLEELRNCCXPGMSGGFLPGVKQIAN 404
+ KIN Y W I G +P V Y +S L + M ++ ++Q N
Sbjct: 6 INKINDYVWEIPPGVKPCQKVPVRIYADSVLLEKMKSDMT--------------LEQGIN 51
Query: 405 VAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLLRTNL 584
V LPGI S+ LPD H GYGF IG +AA D ++ ++SPGG+G+DINCGVR+LRTNL
Sbjct: 52 VGCLPGIYRWSIVLPDAHQGYGFPIGGVAAIDAEE--GVISPGGIGYDINCGVRVLRTNL 109
Query: 585 HEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYVWAEDKE 764
E+DV P ++L ++F +P GVG G + ++ + E L G++W++++GY WAED E
Sbjct: 110 TEEDVRPKLKELVDTIFRLVPPGVGGTGHLRLSPSEFERVLAEGVEWAVQKGYGWAEDME 169
Query: 765 HCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVDEIXDKYAAGKMGIESX 944
+ EE G ADPSKVS +AK RG QLGTLG+GNH+ EIQVVD+I D+ A GIE
Sbjct: 170 YIEERGSWKLADPSKVSEKAKARGRDQLGTLGSGNHFLEIQVVDKIYDEKIAKLFGIERE 229
Query: 945 GQV 953
GQV
Sbjct: 230 GQV 232
>UniRef50_Q6LXF9 Cluster: UPF0027 protein MMP1392; n=9; cellular
organisms|Rep: UPF0027 protein MMP1392 - Methanococcus
maripaludis
Length = 480
Score = 210 bits (512), Expect = 7e-53
Identities = 97/182 (53%), Positives = 130/182 (71%)
Frame = +3
Query: 390 KQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRL 569
+QIANVA LPGI S+ +PD H GYGF IG +AAFD + ++SPGGVGFDINCGVRL
Sbjct: 45 EQIANVACLPGIQKYSLAMPDCHYGYGFCIGGVAAFD--EVTGVISPGGVGFDINCGVRL 102
Query: 570 LRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYVW 749
++TNL + DV P ++L +F ++P G+GSKG I + +++ LE G+ W++ E Y W
Sbjct: 103 VKTNLTKNDVTPKLKELLSEIFKNVPSGLGSKGKIRITKDEIDSVLEEGVSWAVEEEYGW 162
Query: 750 AEDKEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVDEIXDKYAAGKM 929
D +H EE+G+M ADP+ VS AKKRGLPQLG+LG+GNH+ E+Q VDEI D+ AA
Sbjct: 163 ERDIKHIEEHGKMKEADPTLVSDNAKKRGLPQLGSLGSGNHFLEVQYVDEIFDEEAAKTF 222
Query: 930 GI 935
G+
Sbjct: 223 GV 224
>UniRef50_Q5XQ66 Cluster: Putative uncharacterized protein; n=5;
environmental samples|Rep: Putative uncharacterized
protein - uncultured archaeon GZfos26D8
Length = 506
Score = 206 bits (502), Expect = 1e-51
Identities = 95/189 (50%), Positives = 131/189 (69%)
Frame = +3
Query: 387 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 566
++Q NVA+LPGI S+ +PD H GYGF IG +AA D ++ ++SPGGVG+DINCGVR
Sbjct: 49 LQQTINVASLPGIEKYSMVMPDGHQGYGFPIGGVAATDFEE--GVISPGGVGYDINCGVR 106
Query: 567 LLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYV 746
L+RTNL EKDV P + +LF+++P G+G G + ++ L+E L+ G +W + GY
Sbjct: 107 LIRTNLMEKDVRPYLPDILDTLFEYVPAGLGLSGKVRLSYSQLDEVLKGGTEWCIENGYG 166
Query: 747 WAEDKEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVDEIXDKYAAGK 926
W ED E EE G++ A+P K+ ++KKRG PQLGTLG+GNH+ E+ VVDEI D+ A +
Sbjct: 167 WEEDIERTEEGGKLKAANPEKIDEKSKKRGAPQLGTLGSGNHFLELGVVDEIFDERLAKE 226
Query: 927 MGIESXGQV 953
GIE GQV
Sbjct: 227 YGIEEKGQV 235
>UniRef50_Q8SWJ2 Cluster: Putative uncharacterized protein
ECU01_1120; n=1; Encephalitozoon cuniculi|Rep: Putative
uncharacterized protein ECU01_1120 - Encephalitozoon
cuniculi
Length = 477
Score = 191 bits (465), Expect = 3e-47
Identities = 101/233 (43%), Positives = 141/233 (60%)
Frame = +3
Query: 255 IKKGFQPNMXVEGVFYVNSTLEQLMLEELRNCCXPGMSGGFLPGVKQIANVAALPGIVGR 434
+ F +M YV+ L + ++ EL +G L + QI++V +LPG++G
Sbjct: 13 VSPSFNKSMRTSATIYVDEELRKPLMSELE-------AGKGLSSIGQISDVCSLPGLIGD 65
Query: 435 SVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLLRTNLHEKDVLPIKE 614
+GLPD+H+GYGF IG++AAFD+++P+S+VSPGGVG+DINCGVR LRTNL +
Sbjct: 66 VIGLPDIHTGYGFPIGSVAAFDINNPESVVSPGGVGYDINCGVRALRTNLDIGGFRGKAD 125
Query: 615 QLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYVWAEDKEHCEEYGRMLN 794
LA LF+ IP G+GS + L LE G+ + L+ + ED E+CE G M
Sbjct: 126 ALADELFNIIPTGMGSDRRSRIGLDVLNSVLEQGLGYLLKSKEISDEDVEYCESNGCMA- 184
Query: 795 ADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVDEIXDKYAAGKMGIESXGQV 953
D V ++K +GL QLGTLG+GNHY E+Q VDE+ D AG MGI GQ+
Sbjct: 185 GDSRFVGQKSKGKGLNQLGTLGSGNHYLEVQYVDEVYDAEKAGIMGI-GKGQI 236
>UniRef50_A1I791 Cluster: RtcB protein; n=6; cellular organisms|Rep:
RtcB protein - Candidatus Desulfococcus oleovorans Hxd3
Length = 477
Score = 177 bits (432), Expect = 3e-43
Identities = 97/237 (40%), Positives = 138/237 (58%)
Frame = +3
Query: 225 LEKINPYCWSIKKGFQPNMXVEGVFYVNSTLEQLMLEELRNCCXPGMSGGFLPGVKQIAN 404
L +I+ Y W I + M V G+ Y ++ + + +E C +Q+AN
Sbjct: 3 LRQIDDYRWEIPQ--TGAMRVPGIIYADAAMMAALQKE--EAC------------RQVAN 46
Query: 405 VAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLLRTNL 584
VA LPGIV S+ +PD+H GYGF IG +AAFDMD+ ++SPGGVG+DINCGVRL T L
Sbjct: 47 VATLPGIVKASLAMPDIHWGYGFPIGGVAAFDMDE--GVISPGGVGYDINCGVRLAVTKL 104
Query: 585 HEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYVWAEDKE 764
+V P LA +L+ +P GVGS G I + + ++A+ G W+++ G A+D +
Sbjct: 105 FADEVGPRIADLADALYAGVPCGVGSTGGIRLTVAEEKKAISQGASWAVKRGLGDADDID 164
Query: 765 HCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVDEIXDKYAAGKMGI 935
E+ G M ADP VS A +RG QLGTLG+GNH+ E+ V E+ D A + G+
Sbjct: 165 RTEDCGHMAEADPEAVSDNALERGRRQLGTLGSGNHFIEVGEVVEVFDPAVAARFGL 221
>UniRef50_Q5ZTG1 Cluster: Replication factor C subunit; n=17;
Bacteria|Rep: Replication factor C subunit - Legionella
pneumophila subsp. pneumophila (strain Philadelphia 1
/ATCC 33152 / DSM 7513)
Length = 477
Score = 177 bits (430), Expect = 6e-43
Identities = 100/229 (43%), Positives = 139/229 (60%)
Frame = +3
Query: 216 LKSLEKINPYCWSIKKGFQPNMXVEGVFYVNSTLEQLMLEELRNCCXPGMSGGFLPGVKQ 395
L L+KIN + W I + M V GV + + EQL+L+ M + +Q
Sbjct: 4 LSLLKKINDFEWQIPQ--HGKMLVPGVIFAS---EQLILD---------MD---MKVYEQ 46
Query: 396 IANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLLR 575
++NVA LPGIV + +PD H GYGF IG +AAFD DD ++S GGVGFDI+CGVRLL
Sbjct: 47 LSNVATLPGIVSAAYAMPDAHWGYGFPIGGVAAFDPDDG-GVISAGGVGFDISCGVRLLS 105
Query: 576 TNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYVWAE 755
T L ++ +K LA +LF HIP GVGS+G I + + L++ + G W++++GY A
Sbjct: 106 TGLKRDELESVKVSLADALFTHIPAGVGSRGGIHLTIKQLDDMMRGGAQWAVKQGYGEAA 165
Query: 756 DKEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVDEI 902
D E E+ G + A P VS +AKKR ++GTLG+GNHY E+Q V +I
Sbjct: 166 DLERIEDRGCVEGAIPDFVSEQAKKRQKNEMGTLGSGNHYLEVQEVRQI 214
>UniRef50_Q8KET1 Cluster: Putative uncharacterized protein; n=5;
Bacteria|Rep: Putative uncharacterized protein -
Chlorobium tepidum
Length = 465
Score = 174 bits (423), Expect = 4e-42
Identities = 97/239 (40%), Positives = 139/239 (58%), Gaps = 1/239 (0%)
Frame = +3
Query: 222 SLEKINPYCWSIKKGFQPNMXVEGVFYVNST-LEQLMLEELRNCCXPGMSGGFLPGVKQI 398
++ +I+ + W I + ++ +M V FY + LEQ++ + ++Q+
Sbjct: 5 AIRQISGWLWEIPRSYRSDMRVPARFYASEAMLEQILADR---------------SLEQL 49
Query: 399 ANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLLRT 578
NVA LPGIVG ++ +PD+H GYGF IG +AAFD D I+SPGG+G+DINCGVRLL T
Sbjct: 50 VNVATLPGIVGFALAMPDIHEGYGFPIGGVAAFDPD--AGIISPGGIGYDINCGVRLLAT 107
Query: 579 NLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYVWAED 758
+ + V L + ++ +P GVG I +++ LE+ L G + GY ED
Sbjct: 108 SQPFESVREKIPDLVKEIYRQVPSGVGHGNRITFSSKQLEQILRDGAPRMVAFGYGEPED 167
Query: 759 KEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVDEIXDKYAAGKMGI 935
H E G + ADPSKVS AK+RG QLGTLG GNH+ EI +D I D+ AA +MG+
Sbjct: 168 LGHIESGGVIDVADPSKVSQYAKQRGGDQLGTLGTGNHFVEIDRIDAIFDQEAAVRMGL 226
>UniRef50_Q6L1G2 Cluster: RtcB protein; n=3; cellular organisms|Rep:
RtcB protein - Picrophilus torridus
Length = 470
Score = 173 bits (421), Expect = 7e-42
Identities = 84/184 (45%), Positives = 118/184 (64%)
Frame = +3
Query: 387 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 566
++Q+ NVA+LPGIV + +PD+H GYGF IG +AAFD D+ IVSPGGVG+DINCGV
Sbjct: 40 LRQLMNVASLPGIVKAAYAMPDIHLGYGFPIGGVAAFDYDE--GIVSPGGVGYDINCGVS 97
Query: 567 LLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYV 746
L++TN+ D + L +F ++P G+ K +N D+ + L G+ W++ +GY
Sbjct: 98 LIKTNISYNDAKSRIKDLIDEIFKNVPAGIDLKSSFRVNKNDMTDILSDGIKWAVSKGYG 157
Query: 747 WAEDKEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVDEIXDKYAAGK 926
D E EE G M N++P KVS +A RG+ ++G+LG GNH+ EIQ VD I D+ A
Sbjct: 158 TERDIESTEENGSM-NSNPDKVSEKAISRGINEVGSLGGGNHFLEIQKVDRIFDERTARY 216
Query: 927 MGIE 938
GIE
Sbjct: 217 FGIE 220
>UniRef50_Q978S0 Cluster: Putative uncharacterized protein
TVG1391663; n=4; Thermoplasmatales|Rep: Putative
uncharacterized protein TVG1391663 - Thermoplasma
volcanium
Length = 469
Score = 168 bits (409), Expect = 2e-40
Identities = 93/240 (38%), Positives = 137/240 (57%)
Frame = +3
Query: 216 LKSLEKINPYCWSIKKGFQPNMXVEGVFYVNSTLEQLMLEELRNCCXPGMSGGFLPGVKQ 395
+ ++ KI+ Y + I + + +M V G+ Y L +N G + Q
Sbjct: 3 IMNIRKIDDYTYEIPR--EGDMIVHGIVYSTDKL-------FKNTVEDG-------SLNQ 46
Query: 396 IANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLLR 575
+ NVA LPGIV S +PD+H GYGF IG +AAFD D+ I+SPGGVG+DINCGV LLR
Sbjct: 47 VVNVAKLPGIVEASYAMPDIHLGYGFPIGGVAAFDYDE--GIISPGGVGYDINCGVALLR 104
Query: 576 TNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYVWAE 755
T ++ + P + + +F +P G+ S+ P+N DL+E L G+ W++ G
Sbjct: 105 TGMNYAQIKPRIKDITDYIFQEVPSGLTSRKGFPVNQNDLQEILTSGLKWAVSRGLATEL 164
Query: 756 DKEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVDEIXDKYAAGKMGI 935
D + E+ G + + + VS +A +RGL Q+GTLGAGNH+ EIQ V +I D+ A K G+
Sbjct: 165 DMINTEDNG-SIESHGTHVSKQAMQRGLSQIGTLGAGNHFLEIQRVSDIFDEDVARKFGL 223
Score = 33.9 bits (74), Expect = 8.3
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +2
Query: 956 VMIHSGSRGLGHQVXXD 1006
VMIH+GSRGLGHQV D
Sbjct: 230 VMIHTGSRGLGHQVATD 246
>UniRef50_P71930 Cluster: UPF0027 protein Rv2631/MT2707; n=19;
cellular organisms|Rep: UPF0027 protein Rv2631/MT2707 -
Mycobacterium tuberculosis
Length = 432
Score = 163 bits (397), Expect = 6e-39
Identities = 87/183 (47%), Positives = 119/183 (65%), Gaps = 2/183 (1%)
Frame = +3
Query: 393 QIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLL 572
Q+ NVA LPGIV S +PDVH GYGF IG +AA D+D+ +VSPGGVGFDI+CGVRLL
Sbjct: 2 QVVNVATLPGIVRASYAMPDVHWGYGFPIGGVAATDVDND-GVVSPGGVGFDISCGVRLL 60
Query: 573 -RTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARD-LEEALEMGMDWSLREGYV 746
L +++ P + L IP GVG+ G+ + R+ L+E L G +++ +G+
Sbjct: 61 VGEGLDREELQPRLPAVMDRLDRAIPRGVGTAGVWRLPDRNTLQEVLTGGARFAVEQGHG 120
Query: 747 WAEDKEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVDEIXDKYAAGK 926
A D E CE+ G M AD +K+S RA +RGL Q+G+LG+GNH+ E+Q VD + D AA
Sbjct: 121 VALDLERCEDGGVMTGADAAKISDRALQRGLGQIGSLGSGNHFLEVQAVDRVYDPVAAAP 180
Query: 927 MGI 935
MG+
Sbjct: 181 MGL 183
>UniRef50_Q30ZL0 Cluster: Putative uncharacterized protein; n=1;
Desulfovibrio desulfuricans G20|Rep: Putative
uncharacterized protein - Desulfovibrio desulfuricans
(strain G20)
Length = 478
Score = 159 bits (386), Expect = 1e-37
Identities = 78/183 (42%), Positives = 112/183 (61%)
Frame = +3
Query: 387 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 566
+ Q+ A+LPG+ G + +PD HSGYGF IG +A F + I+S GGVG+DI CGVR
Sbjct: 47 IHQLTTAASLPGVAGSVICMPDAHSGYGFPIGCVAGF-CAGKEGIISAGGVGYDIGCGVR 105
Query: 567 LLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYV 746
L T++ +V + ++A +LF IP G+ + +NA ++++ L G W++R G
Sbjct: 106 TLLTDIPAAEVYARRGEIADALFRAIPAGLKGSSHLSLNAEEIKQILHEGAAWAVRNGMG 165
Query: 747 WAEDKEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVDEIXDKYAAGK 926
ED H EE G + AD ++VS A++R QLGTLG+GNHY EIQ+VD I D AA
Sbjct: 166 EKEDLWHTEENGCVAGADAAQVSTEARQRLTGQLGTLGSGNHYLEIQIVDSIHDTAAAAH 225
Query: 927 MGI 935
G+
Sbjct: 226 FGL 228
>UniRef50_A2RQD0 Cluster: RtcB like protein; n=3; root|Rep: RtcB
like protein - Archaeal BJ1 virus
Length = 502
Score = 158 bits (383), Expect = 3e-37
Identities = 76/189 (40%), Positives = 115/189 (60%)
Frame = +3
Query: 387 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 566
++Q+ N LPG+ ++ +PD H GYGF +G + A D +SPG VG+DINCGVR
Sbjct: 49 LQQLKNATHLPGMAEPALCMPDGHQGYGFPVGGVGAIDART--GCISPGAVGYDINCGVR 106
Query: 567 LLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYV 746
+++TNL DV + +L +LF+ +P G+G G+I +A +E ALE G++W++ +GY
Sbjct: 107 MVKTNLSYDDVRGRESELVDALFEAVPSGLGGGGVIDGDADAIEGALERGVEWAVEQGYG 166
Query: 747 WAEDKEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVDEIXDKYAAGK 926
D CE+ GR +A P VS +A RG Q+G+LG+GNH+ E+Q V ++ A
Sbjct: 167 IESDLARCEDEGRRPDARPEYVSQKATDRGRNQMGSLGSGNHFLEVQRVTDVFLPEVAES 226
Query: 927 MGIESXGQV 953
G+E G V
Sbjct: 227 YGLEEDGIV 235
>UniRef50_A5D1V8 Cluster: Uncharacterized conserved protein; n=4;
Clostridia|Rep: Uncharacterized conserved protein -
Pelotomaculum thermopropionicum SI
Length = 476
Score = 151 bits (365), Expect = 5e-35
Identities = 91/224 (40%), Positives = 127/224 (56%), Gaps = 3/224 (1%)
Frame = +3
Query: 276 NMXVEGVFYVNSTLEQLMLEELRNCCXPGMSGGFLPGVKQIANVAALPGIVGRSVGLPDV 455
NM V+G YVN L L+ + ++Q+AN A+LPG+V R G+PD+
Sbjct: 21 NMRVDGFVYVNEYLLPLVRRD--------------KSLEQLANAASLPGVVERVCGMPDI 66
Query: 456 HSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLLRTNLHEKDV-LPIKEQLAQSL 632
H G+G IG + A D ++S G VG DINCGVRLL TN+ K++ +P +L + +
Sbjct: 67 HEGFGLPIGGVMATAAD---GVISAGAVGMDINCGVRLLATNIMAKELKIPFLRRLIERI 123
Query: 633 FDHIPVGVGSKGIIPMNARDL-EEALEMGMDWSLREGYVWAEDKEHCEEYGRMLNADPSK 809
+++P GVG KG ++ EE + G ++ GY ED EE G + AD
Sbjct: 124 EEYVPTGVGKKGKHKAITGEIFEEVVHTGSRGIVKRGYGRPEDLGRTEEEGCLSGADLGA 183
Query: 810 VSLRAKKRGLPQLGTLGAGNHYAEIQVVDEIXDKYAAGKM-GIE 938
VS A KRG QLGTLG GNH+ E+QVV+E+ D AAGK+ G+E
Sbjct: 184 VSGEAYKRGAVQLGTLGGGNHFIELQVVEEVYDP-AAGKLFGLE 226
>UniRef50_Q2AIS2 Cluster: Putative uncharacterized protein; n=1;
Halothermothrix orenii H 168|Rep: Putative
uncharacterized protein - Halothermothrix orenii H 168
Length = 436
Score = 146 bits (355), Expect = 7e-34
Identities = 74/173 (42%), Positives = 105/173 (60%), Gaps = 1/173 (0%)
Frame = +3
Query: 387 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 566
+KQ+ N A+LPG+VG +GLPD+H GYG IG + + K ++SPG VGFDINCGVR
Sbjct: 22 LKQLFNAASLPGVVG-VIGLPDIHQGYGLPIGGVMCSSLK--KGVISPGAVGFDINCGVR 78
Query: 567 LLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSL-REGY 743
LL L +D++ + + L + IP G+G + + E +E G+ + + R GY
Sbjct: 79 LLVAGLRLEDIIDKLDDIMSGLKNEIPAGLGVNSTLTFTDQQFERVVEEGLPFLITRLGY 138
Query: 744 VWAEDKEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVDEI 902
D CEE G + AD + VS +A RG QLGTLG+GNH+ EIQV+D++
Sbjct: 139 GQTIDIAACEENGHLKGADLTGVSKKAINRGKKQLGTLGSGNHFLEIQVIDKV 191
>UniRef50_Q9V168 Cluster: UPF0027 protein PYRAB05600 [Contains: Pab
hyp2 intein (EC 3.1.-.-)]; n=8; Archaea|Rep: UPF0027
protein PYRAB05600 [Contains: Pab hyp2 intein (EC
3.1.-.-)] - Pyrococcus abyssi
Length = 916
Score = 142 bits (344), Expect = 2e-32
Identities = 70/134 (52%), Positives = 91/134 (67%)
Frame = +3
Query: 552 NCGVRLLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSL 731
NCGVRL+RTNL EKDV P +QL +LF ++P GVGS+G + ++ +++ L G W++
Sbjct: 533 NCGVRLIRTNLTEKDVRPRIKQLVDTLFKNVPSGVGSQGRVRLHWTQIDDVLVDGAKWAV 592
Query: 732 REGYVWAEDKEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVDEIXDK 911
GY W ED E EE GRM ADP VS RAK+RG PQLG+LG+GNH+ E+QVVD+I D
Sbjct: 593 DNGYGWEEDLERLEEGGRMEGADPDAVSQRAKQRGAPQLGSLGSGNHFLEVQVVDKIFDP 652
Query: 912 YAAGKMGIESXGQV 953
A G+ GQV
Sbjct: 653 EVAKVYGL-FEGQV 665
Score = 75.8 bits (178), Expect = 2e-12
Identities = 44/111 (39%), Positives = 62/111 (55%)
Frame = +3
Query: 225 LEKINPYCWSIKKGFQPNMXVEGVFYVNSTLEQLMLEELRNCCXPGMSGGFLPGVKQIAN 404
L++I+ W I K F M V G Y + L + M + ++Q AN
Sbjct: 5 LKRIDKIRWEIPK-FDKRMRVPGRVYADDVLLEKMKSDRT--------------LEQAAN 49
Query: 405 VAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINC 557
VA LPGI S+ +PD H GYGF IG +AAFD+++ ++SPGG+G+DINC
Sbjct: 50 VAMLPGIYKYSIVMPDGHQGYGFPIGGVAAFDVNE--GVISPGGIGYDINC 98
>UniRef50_Q2RZP0 Cluster: Uncharacterized protein family UPF0027;
n=1; Salinibacter ruber DSM 13855|Rep: Uncharacterized
protein family UPF0027 - Salinibacter ruber (strain DSM
13855)
Length = 476
Score = 138 bits (335), Expect = 2e-31
Identities = 81/238 (34%), Positives = 123/238 (51%)
Frame = +3
Query: 225 LEKINPYCWSIKKGFQPNMXVEGVFYVNSTLEQLMLEELRNCCXPGMSGGFLPGVKQIAN 404
L +I+ + W I K FQ M V + L +LE + Q
Sbjct: 6 LTRIDEFTWEIPKSFQDAMRVPVRILASENLIDEILER--------------KAIGQAIR 51
Query: 405 VAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLLRTNL 584
+ L G+VG V +PDV+SG G +G +A P ++PG +G DIN GVRLL +++
Sbjct: 52 TSMLSGLVGHLVVMPDVYSGQGAPVGIVAVSKW--PVGTIAPGAIGHDINAGVRLLGSDI 109
Query: 585 HEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYVWAEDKE 764
++ + LA +L +HIP G ++G I +N +++ + G W+LR+ +D
Sbjct: 110 KTEEAEGNFDALADALKNHIPSGTDAEGSISLNKSEVDHVAQSGAQWALRKDMAQQDDLV 169
Query: 765 HCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVDEIXDKYAAGKMGIE 938
EE GR+ ADP KVS A+ G QLGTLG G H+ EI V+E+ ++ AA MG++
Sbjct: 170 RAEEGGRLNEADPKKVSEAARSIGAQQLGTLGGGEHFIEIHSVEEVFNRAAAVTMGLK 227
>UniRef50_Q58095 Cluster: UPF0027 protein MJ0682 [Contains: Mja hyp2
intein (EC 3.1.-.-)]; n=5; Archaea|Rep: UPF0027 protein
MJ0682 [Contains: Mja hyp2 intein (EC 3.1.-.-)] -
Methanococcus jannaschii
Length = 968
Score = 132 bits (320), Expect = 1e-29
Identities = 61/129 (47%), Positives = 94/129 (72%)
Frame = +3
Query: 552 NCGVRLLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSL 731
NCGVRL+RTNL +++V ++L ++LF ++P G+GSKGI+ + +++ LE G+ W++
Sbjct: 585 NCGVRLIRTNLTKEEVQSKIKELIKTLFKNVPSGLGSKGILKFSKSVMDDVLEEGVRWAV 644
Query: 732 REGYVWAEDKEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVDEIXDK 911
+EGY W ED E EE+G + +AD S VS +AK+RG QLG+LG+GNH+ E+Q V+++ D+
Sbjct: 645 KEGYGWKEDLEFIEEHGCLKDADASYVSDKAKERGRVQLGSLGSGNHFLEVQYVEKVFDE 704
Query: 912 YAAGKMGIE 938
AA GIE
Sbjct: 705 EAAEIYGIE 713
Score = 89.4 bits (212), Expect = 2e-16
Identities = 49/111 (44%), Positives = 70/111 (63%)
Frame = +3
Query: 225 LEKINPYCWSIKKGFQPNMXVEGVFYVNSTLEQLMLEELRNCCXPGMSGGFLPGVKQIAN 404
L++++ W + K ++ M V G Y+N +++L+EL P + ++QIAN
Sbjct: 5 LKRVSDVVWELPKDYKDCMRVPGRIYLN----EILLDELE----PEV-------LEQIAN 49
Query: 405 VAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINC 557
VA LPGI S+ +PDVH GYGFAIG +AAFD + ++SPGGVGFDINC
Sbjct: 50 VACLPGIYKYSIAMPDVHYGYGFAIGGVAAFDQRE--GVISPGGVGFDINC 98
>UniRef50_Q8TUS2 Cluster: UPF0027 protein MK1682 [Contains: Mka hyp2
intein (EC 3.1.-.-)]; n=3; cellular organisms|Rep:
UPF0027 protein MK1682 [Contains: Mka hyp2 intein (EC
3.1.-.-)] - Methanopyrus kandleri
Length = 988
Score = 120 bits (288), Expect = 1e-25
Identities = 62/146 (42%), Positives = 93/146 (63%), Gaps = 12/146 (8%)
Frame = +3
Query: 552 NCGVRLLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGI-IPMNARDLEEALEMGMDWS 728
NCGVR+++T+L E DV P +L +++F ++P G+GS+ + ++ ++L + + G +W+
Sbjct: 582 NCGVRVMKTDLTEDDVRPKLRELLETIFRNVPAGLGSRHRRVRLSTQELRQVMLYGAEWA 641
Query: 729 LREGYVWAEDKEHCEEYGRMLNADPS-----------KVSLRAKKRGLPQLGTLGAGNHY 875
+ EG+ + ED +H E G M +A + S RA +RG PQLGTLG+GNH+
Sbjct: 642 VEEGFGFDEDLDHIESRGNMTHAYETIGWEEYGPRDDVASKRAIERGRPQLGTLGSGNHF 701
Query: 876 AEIQVVDEIXDKYAAGKMGIESXGQV 953
E+QVVDEI DK AA KMGI GQV
Sbjct: 702 LEVQVVDEIYDKEAAEKMGIREEGQV 727
Score = 82.6 bits (195), Expect = 2e-14
Identities = 36/55 (65%), Positives = 44/55 (80%)
Frame = +3
Query: 393 QIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINC 557
Q+ANVA LPGI G S+ LPD H GYGF IG +AAFD+++ +VSPGGVG+DINC
Sbjct: 49 QVANVACLPGIYGYSIALPDAHYGYGFPIGGVAAFDVEE--GVVSPGGVGYDINC 101
>UniRef50_Q7NY50 Cluster: Putative uncharacterized protein; n=5;
Proteobacteria|Rep: Putative uncharacterized protein -
Chromobacterium violaceum
Length = 477
Score = 74.1 bits (174), Expect = 6e-12
Identities = 62/203 (30%), Positives = 95/203 (46%), Gaps = 20/203 (9%)
Frame = +3
Query: 387 VKQIANVAALPGIVG-----RSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDI 551
VKQ+ AA G ++ PD H G +G + A DP+ ++ P +G DI
Sbjct: 63 VKQLLGFAATRSADGHHGVCKACATPDFHPGGIAPVGAVVA---TDPEFVI-PAAIGTDI 118
Query: 552 NCGVRLLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSL 731
NCG+RL+ T L + + P K+ L +S H+ + G +P+ +R + G D +
Sbjct: 119 NCGLRLVSTGLQYETIAPHKDAL-ESRLTHVLLDNGRN--LPVFSRGFAALFDAGPDAFI 175
Query: 732 ----REGYVWA--EDKEHCEEYGRMLNADPSKVSLRAKKRGL---------PQLGTLGAG 866
REG +WA E ++ D + R L P LGT GAG
Sbjct: 176 DLLPREG-LWAGVNRTRLLNELAACVSLDSFDSAARYAPEALVGTRELIRDPSLGTQGAG 234
Query: 867 NHYAEIQVVDEIXDKYAAGKMGI 935
NH+ E+QVVD++ D++AA G+
Sbjct: 235 NHFVELQVVDQVLDRHAAYAAGL 257
>UniRef50_A4XIW5 Cluster: Putative uncharacterized protein; n=1;
Caldicellulosiruptor saccharolyticus DSM 8903|Rep:
Putative uncharacterized protein - Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903)
Length = 451
Score = 69.3 bits (162), Expect = 2e-10
Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 3/180 (1%)
Frame = +3
Query: 387 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 566
++Q N + +P + PD H G G +IG + +DM K+ +SP VG DI CG+R
Sbjct: 31 LQQAKNASQIPNVEFLGY-TPDAHIGKGTSIGTIIVWDMS--KAWISPTIVGVDIGCGMR 87
Query: 567 LLRTNLHEKDV-LPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGY 743
L+ T + D+ + +++ + D IP GVG K ++ + +S E Y
Sbjct: 88 LILTKSYADDIDKNLLKKMMSEIEDLIPTGVGKKN------------KKISLPYSKYEEY 135
Query: 744 VWAE--DKEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVDEIXDKYA 917
+ DK+ ++ + D + A + G Q TLG GNH+ E Q + I DK A
Sbjct: 136 LQNTEIDKDISDKMVLIHEFDLDTIPDEAYEIGKEQFATLGGGNHFIEFQKLHVIDDKVA 195
>UniRef50_Q09CZ4 Cluster: RtcB protein; n=2; Cystobacterineae|Rep:
RtcB protein - Stigmatella aurantiaca DW4/3-1
Length = 450
Score = 64.5 bits (150), Expect = 5e-09
Identities = 51/172 (29%), Positives = 79/172 (45%), Gaps = 3/172 (1%)
Frame = +3
Query: 393 QIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLL 572
Q+ N A+ PG+ +V PD H GYG IG + D I+ P G+DI CG+ L
Sbjct: 53 QVVNAASFPGVTRVAV-TPDCHVGYGVPIGTVVETD-----GILLPTAAGYDIGCGMVQL 106
Query: 573 RTNLHEKDVLPIKEQLA--QSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYV 746
+T L +DV +++ + I VGVG+ D E+ +R G
Sbjct: 107 KTTLTAEDVADKQKRRRWIDEVTHRIAVGVGASRAQRQRKVDSRTFSEV-----VRHG-A 160
Query: 747 WAEDKEHCEEYGRMLNADPSKVSLRAKKRGL-PQLGTLGAGNHYAEIQVVDE 899
A + + + + +V + + G QLG+LG GNH+ E+QV +E
Sbjct: 161 KALGRTNATTERDFIPVEDDRVDIPERASGKRDQLGSLGGGNHFTEMQVDEE 212
>UniRef50_P46850 Cluster: Protein rtcB; n=73; cellular
organisms|Rep: Protein rtcB - Escherichia coli (strain
K12)
Length = 408
Score = 64.5 bits (150), Expect = 5e-09
Identities = 57/186 (30%), Positives = 81/186 (43%), Gaps = 4/186 (2%)
Frame = +3
Query: 390 KQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRL 569
+Q+ N A +P I +PDVH G G IG++ K + P VG DI CG+
Sbjct: 28 QQLINTAKMPFIFKHIAVMPDVHLGKGSTIGSVIP-----TKGAIIPAAVGVDIGCGMNA 82
Query: 570 LRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEE-ALEMGMDWS-LREGY 743
LRT L +D+ +L Q++ +P G + G + E + + W+ L GY
Sbjct: 83 LRTALTAEDLPENLAELRQAIETAVPHG-RTTGRCKRDKGAWENPPVNVDAKWAELEAGY 141
Query: 744 VWAEDKEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEI--QVVDEIXDKYA 917
W K Y R LN + K LGTLG GNH+ EI D++
Sbjct: 142 QWLTQK-----YPRFLNTNNYK-----------HLGTLGTGNHFIEICLDESDQVWIMLH 185
Query: 918 AGKMGI 935
+G GI
Sbjct: 186 SGSRGI 191
>UniRef50_A6FXH5 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative
uncharacterized protein - Plesiocystis pacifica SIR-1
Length = 411
Score = 61.7 bits (143), Expect = 4e-08
Identities = 59/199 (29%), Positives = 87/199 (43%), Gaps = 10/199 (5%)
Frame = +3
Query: 387 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 566
V Q+A VA + V +VG+PD+HSG G IG AF + P VG D CG R
Sbjct: 13 VAQLARVAGMDDCVF-AVGMPDLHSGPGIPIGAALAFGRT-----IHPHLVGSDAGCGAR 66
Query: 567 LLRTNLHEKDVLPIKEQLAQSLFD-----HIPV-GVGSKGII-PMNARDLEEALEMGMDW 725
++ K E+ ++ F+ H+ + GV + ++ + R E E
Sbjct: 67 VVSLGKKLKVRGEALERRTRAAFEAPLDEHLDLDGVDDEALLRAVWERGAEAIAEYARTE 126
Query: 726 SLREGYVWAEDKEHCEEYGRMLNADPSKVSLRAKKRG---LPQLGTLGAGNHYAEIQVVD 896
L + AE + R +LR RG LGT+G GNH+AE+ V+
Sbjct: 127 DLA-AFARAEAEPAWLPASRRFADGELPEALRLDARGRCFATSLGTIGGGNHFAELGAVE 185
Query: 897 EIXDKYAAGKMGIESXGQV 953
I D AA +G++ G V
Sbjct: 186 SITDPAAAEALGLQRRGHV 204
>UniRef50_Q72DS6 Cluster: Putative uncharacterized protein; n=2;
Desulfovibrio vulgaris subsp. vulgaris|Rep: Putative
uncharacterized protein - Desulfovibrio vulgaris (strain
Hildenborough / ATCC 29579 / NCIMB8303)
Length = 423
Score = 54.8 bits (126), Expect(2) = 4e-08
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Frame = +3
Query: 390 KQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRL 569
+QI NV +L +V ++ +PDVH+GY IG +A +SPG VG+DI CG+
Sbjct: 78 EQIENVLSLDCLVRLAI-MPDVHAGYDLCIGGVALL-----AGTISPGFVGYDIGCGMCH 131
Query: 570 LRTNLHEKDVLP---IKEQLAQSLFDHIPVGVGSKG 668
+ T ++LP +++L + IPVG +G
Sbjct: 132 VNTGRTVDELLPDALSRQRLFDRILHDIPVGTDMRG 167
Score = 26.6 bits (56), Expect(2) = 4e-08
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 783 RMLNADPSK-VSLRAKKRGLPQLGTLGAGNHYAEIQV 890
R L+A K ++ + Q+ TLG GNH+ E+ V
Sbjct: 175 RFLSASGDKGLTASVVAKAARQMATLGGGNHFIEVGV 211
>UniRef50_Q9KBY5 Cluster: BH1789 protein; n=5; Bacteria|Rep: BH1789
protein - Bacillus halodurans
Length = 407
Score = 60.9 bits (141), Expect = 6e-08
Identities = 52/183 (28%), Positives = 86/183 (46%)
Frame = +3
Query: 399 ANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLLRT 578
A A G V + + + D H GY +G + + ++ +SP GVG+DI CG + ++T
Sbjct: 22 AVTCAQHGDVEQVLLMADHHKGYSQPVGGVVVY-----RNQISPSGVGYDIACGNKAVKT 76
Query: 579 NLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYVWAED 758
N+ D IK+QL++ + D + + S G+ N +E L DWS+
Sbjct: 77 NVKYVD---IKDQLSK-IMDELAQSI-SFGVGRSNREKVEHDLFDDSDWSV--------- 122
Query: 759 KEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVDEIXDKYAAGKMGIE 938
+E G+ + + AKK QLGT+G+GNH+ ++ V + D + A G
Sbjct: 123 ---YQEIGKQ---EHDNLKTLAKK----QLGTVGSGNHFVDLFVEEATGDVWVANHFGSR 172
Query: 939 SXG 947
G
Sbjct: 173 GFG 175
>UniRef50_Q08WH4 Cluster: RtcB protein; n=3; Bacteria|Rep: RtcB
protein - Stigmatella aurantiaca DW4/3-1
Length = 474
Score = 54.8 bits (126), Expect = 4e-06
Identities = 60/208 (28%), Positives = 89/208 (42%), Gaps = 20/208 (9%)
Frame = +3
Query: 390 KQIANVAALP----GIVGRSVGLPDVHSG-YGFAIGNMAAFDMDDPKSIVSPGGVGFDIN 554
+Q+A +AAL G V R PD H G G AIG++ + +V PG VG DIN
Sbjct: 55 RQLAQLAALKHPGGGAVLRVRATPDFHPGDSGVAIGSVL-----HTQGMVVPGAVGTDIN 109
Query: 555 CGVRLLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGM-DWSL 731
CG+RL +L L + + + H G + M++R E L G+ W L
Sbjct: 110 CGMRLHVADLSVDTFLSRRGDFVERMKGHYFFGTRD---VAMSSRAAEALLRDGIPGWLL 166
Query: 732 RE-----GYVWAEDKEHCE------EYGRMLNADPSKVSLRAKKRGLPQ---LGTLGAGN 869
G D + G L P+ + K + + L T+G GN
Sbjct: 167 ETMEHPLGCAARADLSQLDRESTRIHLGGALEGTPAWAPVGYLKSDVVRDAGLATIGGGN 226
Query: 870 HYAEIQVVDEIXDKYAAGKMGIESXGQV 953
H+ E+Q V+ I D+ A + G+ GQ+
Sbjct: 227 HFVEVQRVESIRDRTRAWEWGVRE-GQL 253
>UniRef50_Q4KAP7 Cluster: RtcB protein; n=2; Bacteria|Rep: RtcB
protein - Pseudomonas fluorescens (strain Pf-5 / ATCC
BAA-477)
Length = 477
Score = 53.6 bits (123), Expect = 1e-05
Identities = 57/195 (29%), Positives = 89/195 (45%), Gaps = 17/195 (8%)
Frame = +3
Query: 420 GIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLLRTNLHEKDV 599
G V + PD H+G +G++ D +V P +G DINCG+RL + L+ +
Sbjct: 70 GEVKCACATPDFHTGSPIPVGSVIVTSHD----MVVPQAIGTDINCGMRLHKLGLNYEQF 125
Query: 600 LPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWS---------LREGYVWA 752
+ K + + + G + P A A +G W+ L G +A
Sbjct: 126 MAQKAKWTALVRGDLLEGTRNIPTSP-TAMSALFASGLGDFWAQVQQQDPIGLFAGADFA 184
Query: 753 E-DKE----HCEEYGRMLNADPSKVSLRAKKRGL---PQLGTLGAGNHYAEIQVVDEIXD 908
+ +E H + R +AD + +L+ R + P LG+LG GNH+ EIQVV E+ D
Sbjct: 185 QLQRELSGLHESSFARG-SADYAPEALQDLSRKILRDPGLGSLGGGNHFVEIQVVTELVD 243
Query: 909 KYAAGKMGIESXGQV 953
+ A G+ S GQV
Sbjct: 244 RQACFAQGL-SVGQV 257
>UniRef50_Q7URB3 Cluster: Putative uncharacterized protein; n=2;
Pirellula sp.|Rep: Putative uncharacterized protein -
Rhodopirellula baltica
Length = 528
Score = 52.8 bits (121), Expect = 2e-05
Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 21/196 (10%)
Frame = +3
Query: 390 KQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRL 569
+Q N PG V + V PD H GYG +G + M P + V PG VG DI C + L
Sbjct: 75 QQAINSRLAPG-VSQVVLNPDAHVGYGAPVGCV----MVSP-THVYPGPVGVDIKCSMSL 128
Query: 570 LRTNLHEKDVL--PIKEQLAQSLFDHIPVGVG--------SKGII-PMNARDLEEALEMG 716
L+T+L E ++ ++ ++ Q++ +P G G S+ + P+ + E
Sbjct: 129 LQTDLPESEITDWKMRRRVIQAIAKRVPTGAGRGQRHVPKSRSVDGPLGFQVATEGASKS 188
Query: 717 MDWSLREGYVWA---EDKEHCEEYGRM--LNADPSKVSLRAKKRG-----LPQLGTLGAG 866
+ L WA ED H G + L A + KR QLG+ G G
Sbjct: 189 VLKKLGIPKSWASRCEDASHTAPDGSVDTLAARLEWMGRERDKRDRLESKFRQLGSYGGG 248
Query: 867 NHYAEIQVVDEIXDKY 914
NH+ E ++V +Y
Sbjct: 249 NHFGEAEIVSLSNKQY 264
>UniRef50_Q08W43 Cluster: Rtcb protein; n=9; Bacteria|Rep: Rtcb
protein - Stigmatella aurantiaca DW4/3-1
Length = 408
Score = 52.8 bits (121), Expect = 2e-05
Identities = 51/169 (30%), Positives = 72/169 (42%), Gaps = 4/169 (2%)
Frame = +3
Query: 390 KQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRL 569
+Q+ N+A LP I +PDVH G+G +G++ V P VG DI CG+
Sbjct: 31 QQLKNLAGLPFIHKWVAAMPDVHRGFGATVGSVV-----PTVGAVIPAAVGVDIGCGMIA 85
Query: 570 LRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYVW 749
+RT L EQL SL V + +P D + G W
Sbjct: 86 VRTTLR-------AEQLPDSL---AAVRSAIERTVPHGRTDNGGRNDRG---------AW 126
Query: 750 AE-DKEHCEEYGRMLNADPSKVSLRAK-KRG--LPQLGTLGAGNHYAEI 884
+ HCE + R+ + V+ + RG L LGTLG GNH+ E+
Sbjct: 127 QDAPAAHCEAWARLKPGYDAIVAKHPRLGRGPELGHLGTLGTGNHFIEL 175
>UniRef50_Q3J9M5 Cluster: Putative uncharacterized protein; n=5;
Bacteria|Rep: Putative uncharacterized protein -
Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)
Length = 396
Score = 52.4 bits (120), Expect = 2e-05
Identities = 32/89 (35%), Positives = 44/89 (49%)
Frame = +3
Query: 387 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 566
++Q N+A LP +PD H GYG IG + A K + P VG DI CG+
Sbjct: 36 LEQARNLANLPFAFKHIAIMPDTHQGYGMPIGAILA-----TKGAIIPNAVGVDIGCGMC 90
Query: 567 LLRTNLHEKDVLPIKEQLAQSLFDHIPVG 653
LRTNL + +KE + + +PVG
Sbjct: 91 SLRTNLEHIETPKLKE-IMGIIRKTVPVG 118
>UniRef50_Q8I5J3 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 569
Score = 52.0 bits (119), Expect = 3e-05
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 2/166 (1%)
Frame = +3
Query: 393 QIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLL 572
QI N+A L I G LPDVH G G IG++ K + P GVG DI CGV +
Sbjct: 109 QIQNLARLDIIKGHITILPDVHLGKGIIIGSVFL-----TKDFIIPNGVGVDIGCGVLCI 163
Query: 573 R-TNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYVW 749
+ NL +KD + E++ ++++ I K IP++ D+ + +G
Sbjct: 164 KINNLKKKD---LNEKIINNIYNKI------KRNIPLSF-DMHD-----------QGVF- 201
Query: 750 AEDKEHCEEYGRMLNADPS-KVSLRAKKRGLPQLGTLGAGNHYAEI 884
D ++ + +LN S + + + QLGTLG GNH+ EI
Sbjct: 202 --DSKNI--FSNLLNTYGSPNIKGIVQPKHFKQLGTLGGGNHFIEI 243
>UniRef50_A5K021 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 470
Score = 50.8 bits (116), Expect = 7e-05
Identities = 32/86 (37%), Positives = 45/86 (52%)
Frame = +3
Query: 387 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 566
+KQI N+A L I G LPDVH G G IG++ K + P GVG DI CGV
Sbjct: 66 LKQIKNLAMLDIIKGHVTILPDVHLGKGIIIGSVFL-----TKDFIIPNGVGVDIGCGVL 120
Query: 567 LLRTNLHEKDVLPIKEQLAQSLFDHI 644
++ N +K L +E + +++ I
Sbjct: 121 CVKINKLKKKNL--REHIINNIYKKI 144
>UniRef50_A1ZPN4 Cluster: RtcB protein; n=2; Bacteria|Rep: RtcB
protein - Microscilla marina ATCC 23134
Length = 403
Score = 48.0 bits (109), Expect = 5e-04
Identities = 34/91 (37%), Positives = 43/91 (47%)
Frame = +3
Query: 387 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 566
+KQI N G V D H GYG IG A+ K +S GVGFDI CG +
Sbjct: 17 IKQIKNCL---GEEDLGVLTADAHYGYGHPIGGAVAY-----KDKISLSGVGFDIACGNK 68
Query: 567 LLRTNLHEKDVLPIKEQLAQSLFDHIPVGVG 659
+RTN+ D+ K + +F I GVG
Sbjct: 69 AVRTNVKAADMDTAK--VMDEIFKQISFGVG 97
>UniRef50_UPI00006A2AF4 Cluster: UPI00006A2AF4 related cluster; n=1;
Xenopus tropicalis|Rep: UPI00006A2AF4 UniRef100 entry -
Xenopus tropicalis
Length = 312
Score = 46.4 bits (105), Expect = 0.001
Identities = 28/91 (30%), Positives = 46/91 (50%)
Frame = +3
Query: 393 QIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLL 572
Q+ N+A LP + +PDVH G G IG++ + K+I+ P VG D+ CG+
Sbjct: 32 QLRNIARLPIVFKHVAVMPDVHLGIGATIGSV----VPTLKAII-PAAVGVDLGCGMMAC 86
Query: 573 RTNLHEKDVLPIKEQLAQSLFDHIPVGVGSK 665
+T L D+ + ++ +PVG+ K
Sbjct: 87 KTTLTASDLPDNLAGVRTAIERAVPVGMTPK 117
>UniRef50_A1K1J2 Cluster: RtcB protein; n=7; Bacteria|Rep: RtcB
protein - Azoarcus sp. (strain BH72)
Length = 402
Score = 46.0 bits (104), Expect = 0.002
Identities = 47/191 (24%), Positives = 80/191 (41%), Gaps = 2/191 (1%)
Frame = +3
Query: 387 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 566
++Q+ N++ LP + +PDVH+G G IG++ + +I+ P VG DI CG+
Sbjct: 26 LQQLVNLSQLPIVDHPIAAMPDVHAGIGATIGSV----IPTAHAII-PAAVGVDIGCGMN 80
Query: 567 LLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYV 746
LR +L + +L ++ +PVG E + +R
Sbjct: 81 ALRLSLDAGRLPDNLGRLRSAIEAAVPVG-----------------FEQHDESRVRGSAH 123
Query: 747 WAEDKEHCEEYGRMLNADPS--KVSLRAKKRGLPQLGTLGAGNHYAEIQVVDEIXDKYAA 920
+ + + ++ P K+ R + QLG+LG GNH+ E+ VDE +
Sbjct: 124 ARQARRLGDRLDAIVGRHPGLMKMQRRFNTTWICQLGSLGGGNHFIEL-CVDEADQLWVM 182
Query: 921 GKMGIESXGQV 953
G G V
Sbjct: 183 LHSGSRGIGNV 193
>UniRef50_Q1FKT8 Cluster: Putative uncharacterized protein; n=1;
Clostridium phytofermentans ISDg|Rep: Putative
uncharacterized protein - Clostridium phytofermentans
ISDg
Length = 196
Score = 45.2 bits (102), Expect = 0.003
Identities = 47/170 (27%), Positives = 76/170 (44%)
Frame = +3
Query: 390 KQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRL 569
+Q N+A LP I +PD H+G G IG + A + +V P VG DI CG+
Sbjct: 30 EQAMNLARLPFIHKWVCLMPDTHTGKGMPIGGVIATE-----GVVIPNAVGVDIGCGMGF 84
Query: 570 LRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYVW 749
++TN+ V +++ + S G + II R++ +E V
Sbjct: 85 IQTNI---PVNLLRDTMTGS-------GTLLQAIISDILRNIPTGFNRHK--QPQESDVL 132
Query: 750 AEDKEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVDE 899
K E+Y S++ ++ + G Q+GTL GNH+ E+Q +E
Sbjct: 133 DFAKNEIEKYSM-----DSELLMQIDE-GYYQVGTLDGGNHFIELQQDEE 176
>UniRef50_Q8YRC2 Cluster: All3526 protein; n=6; cellular
organisms|Rep: All3526 protein - Anabaena sp. (strain
PCC 7120)
Length = 393
Score = 44.8 bits (101), Expect = 0.004
Identities = 26/88 (29%), Positives = 42/88 (47%)
Frame = +3
Query: 390 KQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRL 569
K NVA+LP + +PDVH G G +G++ A K + P VG DI CG+
Sbjct: 28 KMAKNVASLPFVFKHVALMPDVHLGKGALVGSVIA-----TKEAIIPAAVGVDIGCGMSA 82
Query: 570 LRTNLHEKDVLPIKEQLAQSLFDHIPVG 653
++T + + +++ + IP G
Sbjct: 83 IKTPFTSEQLEGKLKKIRLDIEAAIPTG 110
>UniRef50_Q389M0 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 486
Score = 43.6 bits (98), Expect = 0.010
Identities = 44/175 (25%), Positives = 82/175 (46%), Gaps = 5/175 (2%)
Frame = +3
Query: 387 VKQIANVAALPGIVGRSV-GLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGV 563
V+Q+ ++ L I+ V +PDVH+ G +G + + ++I+ P VG DI CG+
Sbjct: 73 VEQLLQLSRLGDIIQHPVVAMPDVHTSNGATVGTV----IPTTRAII-PASVGVDIGCGM 127
Query: 564 RLLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNA----RDLEEALEMGMDWSL 731
+RT+L ++D+ L ++ +P G G ++A ++ E++ L
Sbjct: 128 IAVRTSLTQEDLPSSLAALRLAIEVAVPHGRTHNGRSGLDAGSWRNNIPESVAAVWRTQL 187
Query: 732 REGYVWAEDKEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVD 896
++G+ +E C + ++ + LGTLG GNH+ E+ V D
Sbjct: 188 QKGF-----EEICCMQKHIETSN-----------HIEHLGTLGGGNHFIELCVDD 226
>UniRef50_A7BNF2 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 164
Score = 43.2 bits (97), Expect = 0.014
Identities = 24/88 (27%), Positives = 42/88 (47%)
Frame = +3
Query: 390 KQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRL 569
+Q+ ++ LP I +PDVH G G IG++ K + P VG D+ CG+
Sbjct: 27 QQLHELSTLPFIHKHVAAMPDVHVGIGATIGSVIP-----TKGAIIPAAVGVDLGCGMSA 81
Query: 570 LRTNLHEKDVLPIKEQLAQSLFDHIPVG 653
++ +L D+ + + + +PVG
Sbjct: 82 VQLSLMASDLPDNLYGIRSKIEEAVPVG 109
>UniRef50_A6PNP2 Cluster: Putative uncharacterized protein; n=1;
Victivallis vadensis ATCC BAA-548|Rep: Putative
uncharacterized protein - Victivallis vadensis ATCC
BAA-548
Length = 348
Score = 43.2 bits (97), Expect = 0.014
Identities = 28/87 (32%), Positives = 43/87 (49%)
Frame = +3
Query: 387 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 566
V+Q+ A LPG++ + G+PD+H G +G AA + ++ P G D+ CG+
Sbjct: 6 VEQLKRAAELPGMIA-AAGMPDLHPGLSAPVG--AALLSE---GVIYPELAGGDVGCGIA 59
Query: 567 LLRTNLHEKDVLPIKEQLAQSLFDHIP 647
L RT L K L + L H+P
Sbjct: 60 LFRTGLAAGKFKAAK--LERRLLAHLP 84
>UniRef50_Q185T6 Cluster: Putative uncharacterized protein; n=3;
Clostridium|Rep: Putative uncharacterized protein -
Clostridium difficile (strain 630)
Length = 355
Score = 42.3 bits (95), Expect = 0.024
Identities = 26/68 (38%), Positives = 43/68 (63%)
Frame = +3
Query: 390 KQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRL 569
KQ+ +++ L GI+ R VGLPD+H+G +G +A + K+I+ P +G DI CG+ L
Sbjct: 20 KQLEDISKLNGIL-RVVGLPDLHAG-KIPVG-LAV----ETKNIIYPHIIGNDIGCGMTL 72
Query: 570 LRTNLHEK 593
+T + +K
Sbjct: 73 FKTGVLKK 80
Score = 35.1 bits (77), Expect = 3.6
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 846 LGTLGAGNHYAEIQVVDEIXDK 911
LGT+G+GNH+ EIQ + EI +K
Sbjct: 115 LGTIGSGNHFVEIQCISEIYNK 136
>UniRef50_Q0UMZ4 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 532
Score = 42.3 bits (95), Expect = 0.024
Identities = 29/72 (40%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +3
Query: 387 VKQIANVA-ALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGV 563
V Q++ A LPGIV +VG PD+H G F IG + A K V P +G DI CG+
Sbjct: 122 VTQLSTTAHTLPGIV-HAVGQPDLHPGSKFPIGAVIA-----SKGWVHPPLIGGDIGCGM 175
Query: 564 RLLRTNLHEKDV 599
+T L V
Sbjct: 176 AWFKTTLPRSQV 187
Score = 37.5 bits (83), Expect = 0.67
Identities = 15/18 (83%), Positives = 18/18 (100%)
Frame = +3
Query: 846 LGTLGAGNHYAEIQVVDE 899
LGT+GAGNH+AEIQVV+E
Sbjct: 233 LGTIGAGNHFAEIQVVEE 250
>UniRef50_Q4TC88 Cluster: Chromosome undetermined SCAF7042, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF7042, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 531
Score = 41.1 bits (92), Expect = 0.054
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +3
Query: 198 RQYHXALKSLEKINPYCWSIKKGFQPNMXVEG 293
R Y+ L+ L+KI CW IKKGF PNM G
Sbjct: 3 RSYNDELQFLDKIGSNCWRIKKGFVPNMQASG 34
>UniRef50_Q8NLE1 Cluster: Uncharacterized ACR; n=7;
Actinomycetales|Rep: Uncharacterized ACR -
Corynebacterium glutamicum (Brevibacterium flavum)
Length = 383
Score = 41.1 bits (92), Expect = 0.054
Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 5/177 (2%)
Frame = +3
Query: 387 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 566
+KQ A +P I +PD H G G ++G + K + P VG DI CG+
Sbjct: 16 LKQAEATATMPFIYPHVALMPDAHFGLGSSVGTVFG-----TKGAIIPAAVGVDIGCGMI 70
Query: 567 LLRTN-----LHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSL 731
+ TN L +D++ +++ + + IP+ G+ N+ L+E ++ +
Sbjct: 71 GVCTNYTASDLEGRDLVTLRDYIERV----IPLSPGN-----YNSTTLKETAKVKV---- 117
Query: 732 REGYVWAEDKEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVDEI 902
AE +E E G L+ P+ KR QLG+LG GNH+ E+ +DE+
Sbjct: 118 ------AELEELAERDGVDLSHSPT------WKR---QLGSLGGGNHFIEL-CLDEL 158
>UniRef50_Q7QTD7 Cluster: GLP_9_6218_4470; n=1; Giardia lamblia ATCC
50803|Rep: GLP_9_6218_4470 - Giardia lamblia ATCC 50803
Length = 582
Score = 40.7 bits (91), Expect = 0.072
Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 18/184 (9%)
Frame = +3
Query: 387 VKQIANVAALPGIVGRSVG-LPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGV 563
+ + +A LP V + + +PD HSG G +G A +D + + P +G DI CG+
Sbjct: 20 IAMLKELAKLPFFVNQPIRVMPDCHSGKGTIVGFSAPYD-----TCIIPSIIGVDIGCGM 74
Query: 564 RLLR--TNLHEKDVLPIKEQ-----LAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMD 722
++R L E I +Q L + + +P G K +P + +
Sbjct: 75 FVIRLPNKLLEPYEGKISDQSFLKNLDEIVHKEVPAGYYGKHAVPGGPTGFHQDVSEARF 134
Query: 723 WSLREGYVWAEDKEHCEEYGRMLNADP---------SKVSLRAKKRGLPQ-LGTLGAGNH 872
+ + K +C E +L+ D + LR L + GTLG+GNH
Sbjct: 135 KRMLSHLLPCLSK-YCPEASGLLSYDDFVAEFEYWHDYLDLRFTFHSLMKCCGTLGSGNH 193
Query: 873 YAEI 884
+ E+
Sbjct: 194 FVEL 197
>UniRef50_Q1K006 Cluster: Putative uncharacterized protein; n=1;
Desulfuromonas acetoxidans DSM 684|Rep: Putative
uncharacterized protein - Desulfuromonas acetoxidans DSM
684
Length = 364
Score = 40.3 bits (90), Expect = 0.095
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +3
Query: 432 RSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLLRTNLHEKDVLPIK 611
R + D H GY IG + A + ++ P VG+DI CG+ + T ++
Sbjct: 30 RGALMADAHLGYALPIGGVIA-----TQDVIVPAWVGYDIGCGMCAVPTTFDATEIHAHG 84
Query: 612 EQLAQSLFDHIPVG 653
E + +++ +PVG
Sbjct: 85 EAIFNAIYQAVPVG 98
>UniRef50_Q8RJY8 Cluster: ORF8, ORF7, ORF6, ORF5, ORF4, ORF3, ORF2,
ORF1, stiA; n=2; Cystobacterineae|Rep: ORF8, ORF7, ORF6,
ORF5, ORF4, ORF3, ORF2, ORF1, stiA - Stigmatella
aurantiaca
Length = 385
Score = 39.9 bits (89), Expect = 0.13
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +3
Query: 387 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 566
VKQ+ +A P + +PDVH G A+G + A + + IV PG +G D+ CGV
Sbjct: 27 VKQLQLLARQPYLAEHVAAMPDVHVAEGVAVGTVFATE----RHIV-PGALGGDLGCGVS 81
Query: 567 LLR 575
+R
Sbjct: 82 AVR 84
>UniRef50_Q8A7R9 Cluster: Protein rtcB; n=7; cellular organisms|Rep:
Protein rtcB - Bacteroides thetaiotaomicron
Length = 465
Score = 39.5 bits (88), Expect = 0.17
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 390 KQIANVAA-LPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 566
KQ N+A LP VG ++ +PD H+GYG IG + A D + V P VG DI C +
Sbjct: 99 KQQMNLAMRLPVTVGGAL-MPDAHAGYGLPIGGVLATD-----NAVIPYAVGVDIGCRMS 152
Query: 567 L 569
L
Sbjct: 153 L 153
>UniRef50_A6ELD5 Cluster: Protein rtcB; n=4; Bacteroidetes|Rep:
Protein rtcB - unidentified eubacterium SCB49
Length = 463
Score = 39.5 bits (88), Expect = 0.17
Identities = 48/167 (28%), Positives = 66/167 (39%)
Frame = +3
Query: 393 QIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLL 572
Q+ + LP V ++ +PD HSGYG IG + A ++ V P GVG DI C R+
Sbjct: 100 QLYDALKLPIAVAGAL-MPDAHSGYGLPIGGVLA-----TENAVIPYGVGVDIGC--RMC 151
Query: 573 RTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYVWA 752
T + P+K KG LE L+ + + E
Sbjct: 152 LT------IYPMKASYL-------------KG----KQHQLENILKHHTKFGMYE----T 184
Query: 753 EDKEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVV 893
DK+H E + R K + QLGT G GNH+ E V
Sbjct: 185 HDKKHDHEIFERSAFKDIPLLRRLKIKAFKQLGTSGGGNHFVEFGTV 231
>UniRef50_A6DJD1 Cluster: Putative uncharacterized protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: Putative
uncharacterized protein - Lentisphaera araneosa HTCC2155
Length = 358
Score = 39.5 bits (88), Expect = 0.17
Identities = 27/66 (40%), Positives = 38/66 (57%)
Frame = +3
Query: 387 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 566
++Q+ A+LPG+ +VGLPD+H G G IG A F + I P VG DI CG+
Sbjct: 13 LEQLKQTASLPGMK-LAVGLPDLHPGRGNPIG--ATFYSE---GIFYPYLVGGDIGCGMG 66
Query: 567 LLRTNL 584
L ++ L
Sbjct: 67 LWQSQL 72
Score = 35.1 bits (77), Expect = 3.6
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 846 LGTLGAGNHYAEIQVVDEIXDKYAAGKMGI 935
LGT+G GNH+AE+Q ++ + D+ K G+
Sbjct: 113 LGTIGGGNHFAELQKIEVVFDQELFEKAGL 142
>UniRef50_A3RTM5 Cluster: RtcB protein; n=37; Proteobacteria|Rep:
RtcB protein - Ralstonia solanacearum UW551
Length = 379
Score = 39.5 bits (88), Expect = 0.17
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +3
Query: 846 LGTLGAGNHYAEIQVVDEIXDKYAAGKMGIES 941
LGT+G GNH+AE+Q +D I D AA +G+ +
Sbjct: 129 LGTIGGGNHFAELQRLDTIHDTAAADALGLNA 160
Score = 38.3 bits (85), Expect = 0.38
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = +3
Query: 387 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 566
++Q+ A LPG+ G+PD+H G G+ +G A F + P +G DI CG+
Sbjct: 27 IQQLQTTATLPGM-RHVAGMPDLHPGRGYPVG--APF---FSVGCLYPALIGNDIGCGMA 80
Query: 567 LLRTNL 584
L T+L
Sbjct: 81 LWATDL 86
>UniRef50_Q73PJ5 Cluster: Putative uncharacterized protein; n=1;
Treponema denticola|Rep: Putative uncharacterized
protein - Treponema denticola
Length = 375
Score = 39.1 bits (87), Expect = 0.22
Identities = 28/88 (31%), Positives = 43/88 (48%)
Frame = +3
Query: 444 LPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLLRTNLHEKDVLPIKEQLA 623
+PD H+G G IG F M+ K I+ P VG DI CG+ R N+ D+ +L
Sbjct: 43 MPDCHAGKGAVIG----FTMNIDKYII-PNIVGVDIGCGILSARLNIKNPDL----AELD 93
Query: 624 QSLFDHIPVGVGSKGIIPMNARDLEEAL 707
+ +IP G I ++ ++ EE +
Sbjct: 94 NFIKKNIPHGKAVHRNIKIDNKEFEEEI 121
>UniRef50_Q30KY5 Cluster: Gp160; n=4; root|Rep: Gp160 - Listeria
phage P100
Length = 427
Score = 38.3 bits (85), Expect = 0.38
Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Frame = +3
Query: 387 VKQIANVAALPGIVGRSVG-LPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGV 563
V Q+ + + + G V +PD+H+G G +G + + V P +G DI CG+
Sbjct: 47 VGQVIELLSQEFVKGERVRFMPDIHAGKGCVVGTTMTYT-----NKVVPNLIGVDIGCGI 101
Query: 564 RLLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALE 710
R+ +L + E+L + + +P G +G + +N + ++L+
Sbjct: 102 RVTELDLEVNNT--TLEKLDSVIKEFVPSGNSVRG-VALNQEKVSKSLK 147
>UniRef50_A3IXW8 Cluster: Putative uncharacterized protein; n=3;
Chroococcales|Rep: Putative uncharacterized protein -
Cyanothece sp. CCY 0110
Length = 996
Score = 37.9 bits (84), Expect = 0.51
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +3
Query: 387 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINC 557
+K NVA+LP + +PDVH G G +G++ A + V P VG DI C
Sbjct: 27 MKMAKNVASLPFVYKHVALMPDVHLGKGALVGSVIA-----TEDAVIPAAVGVDIGC 78
>UniRef50_Q9RX85 Cluster: RtcB protein; n=1; Deinococcus
radiodurans|Rep: RtcB protein - Deinococcus radiodurans
Length = 470
Score = 37.5 bits (83), Expect = 0.67
Identities = 23/63 (36%), Positives = 30/63 (47%)
Frame = +3
Query: 381 PGVKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCG 560
PG + +VA I +PD H GYG IG + A ++ V P GVG DI C
Sbjct: 95 PGAHRQMDVAMQLPISRAGALMPDAHVGYGLPIGGVLA-----TENAVIPYGVGVDIGCS 149
Query: 561 VRL 569
+ L
Sbjct: 150 MML 152
>UniRef50_A0YUJ4 Cluster: Putative uncharacterized protein; n=1;
Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
protein - Lyngbya sp. PCC 8106
Length = 624
Score = 37.5 bits (83), Expect = 0.67
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +3
Query: 402 NVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINC 557
NVA+LP + +PDVH G G +G++ A K + P VG DI C
Sbjct: 32 NVASLPFVFKHVALMPDVHLGKGALVGSVIA-----TKDAIIPAAVGVDIGC 78
>UniRef50_A4X6J3 Cluster: Putative uncharacterized protein; n=1;
Salinispora tropica CNB-440|Rep: Putative
uncharacterized protein - Salinispora tropica CNB-440
Length = 395
Score = 37.1 bits (82), Expect = 0.89
Identities = 32/79 (40%), Positives = 42/79 (53%)
Frame = +3
Query: 387 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 566
V Q VAAL G+V G+PD+H G G IG AA +++ P VG DI CG+
Sbjct: 34 VDQCRQVAALDGMV-HVAGMPDLHPGKGAPIG--AAM----TSTLLYPHLVGSDIGCGIA 86
Query: 567 LLRTNLHEKDVLPIKEQLA 623
+ L K V+P E+LA
Sbjct: 87 VFPIVL--KRVVP--ERLA 101
>UniRef50_A0W7X6 Cluster: Putative uncharacterized protein; n=1;
Geobacter lovleyi SZ|Rep: Putative uncharacterized
protein - Geobacter lovleyi SZ
Length = 387
Score = 37.1 bits (82), Expect = 0.89
Identities = 51/166 (30%), Positives = 69/166 (41%), Gaps = 2/166 (1%)
Frame = +3
Query: 393 QIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRLL 572
QI + P GR +PD H+G G IG F V P VG DI CGV +
Sbjct: 18 QIRLIQEHPAFEGRVAIMPDAHAGAGCVIGFTGRFGCG-----VIPNIVGVDIGCGVAAV 72
Query: 573 RTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLREGYVWA 752
L + L + + IP+G+ S+ N R L E G+ +L +
Sbjct: 73 --PLARPGRIDF-GALDRFIRQQIPLGMTSR----RNDRYLAEC---GLSKALA-----S 117
Query: 753 EDKEHCEEYGRMLNADPSKVSLRAKKRGLP--QLGTLGAGNHYAEI 884
+ C R + D + + K LP QLGTLG GNH+ EI
Sbjct: 118 QATTLC----RRIETDFYRAE-KISKFILPLLQLGTLGGGNHFIEI 158
>UniRef50_Q21NY4 Cluster: Putative uncharacterized protein; n=1;
Saccharophagus degradans 2-40|Rep: Putative
uncharacterized protein - Saccharophagus degradans
(strain 2-40 / ATCC 43961 / DSM 17024)
Length = 410
Score = 35.9 bits (79), Expect = 2.0
Identities = 24/71 (33%), Positives = 39/71 (54%)
Frame = +3
Query: 387 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 566
++Q+ + L G+ +VG+PD+H G G IG AAF + + P VG DI CG+
Sbjct: 39 LQQLTKTSQLQGM-RFAVGMPDLHPGRGNPIG--AAF---VTQGCIYPHLVGSDIGCGMG 92
Query: 567 LLRTNLHEKDV 599
L + ++ K +
Sbjct: 93 LWQLDVKPKQI 103
Score = 34.7 bits (76), Expect = 4.7
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 834 GLPQLGTLGAGNHYAEIQVVDEIXDKYAAGKMGIES 941
GL LGT+G GNH+AE Q V+ + + + + ++S
Sbjct: 140 GLHNLGTIGGGNHFAEFQKVERVFCQDSFNALALKS 175
>UniRef50_A5EB30 Cluster: Putative uncharacterized protein; n=2;
Bradyrhizobium|Rep: Putative uncharacterized protein -
Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
Length = 379
Score = 35.9 bits (79), Expect = 2.0
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +3
Query: 387 VKQIANVAALPGIVGRSV-GLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGV 563
V+Q+ VA +PG+ R+V GLPD+H G +G D + P VG D CG+
Sbjct: 28 VRQLETVADIPGV--RAVAGLPDLHPGKFGPVGCAILADQ------IHPAFVGSDAGCGM 79
Query: 564 RLLRTNLHEKDV 599
L + +L + +
Sbjct: 80 ALYQLDLASRRI 91
Score = 35.1 bits (77), Expect = 3.6
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 846 LGTLGAGNHYAEIQVVDEIXD 908
LGT+G GNH+ E+Q V+E+ D
Sbjct: 129 LGTIGGGNHFCELQAVEEVFD 149
>UniRef50_A6EDZ6 Cluster: Protein rtcB; n=1; Pedobacter sp.
BAL39|Rep: Protein rtcB - Pedobacter sp. BAL39
Length = 466
Score = 35.5 bits (78), Expect = 2.7
Identities = 24/69 (34%), Positives = 34/69 (49%)
Frame = +3
Query: 390 KQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVRL 569
KQ+ +LP + + +PD H+GYG IG + A + V P VG DI C R+
Sbjct: 101 KQMELAMSLP-VATQGALMPDAHTGYGLPIGAVLA-----TEDAVIPYAVGVDIGC--RM 152
Query: 570 LRTNLHEKD 596
T + E D
Sbjct: 153 AMTIIDETD 161
>UniRef50_A1FGD7 Cluster: Putative uncharacterized protein; n=1;
Pseudomonas putida W619|Rep: Putative uncharacterized
protein - Pseudomonas putida W619
Length = 277
Score = 35.5 bits (78), Expect = 2.7
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
Frame = +3
Query: 522 VSPGGVGFDINCGVRLLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEE 701
VS GVG I G+RL+ L VLP KE Q++F+H+ G + ++ E
Sbjct: 77 VSSKGVGHKIAEGLRLVNDRLKYSIVLPDKE---QAIFNHLAESEGDRYLVASLYLCHHE 133
Query: 702 ALEM-GMDWSLREGYVWAEDKEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAG 866
++ + W LR+ Y D EH + S + + G P+ G L G
Sbjct: 134 LTDLDALVWRLRQ-YCAVLDVEHYNDPPSQEVLSRSLERISEQLEGQPEGGYLEQG 188
>UniRef50_Q97DT9 Cluster: Uncharacterized conserved protein,
RtcB/UPF0027 family; n=1; Clostridium
acetobutylicum|Rep: Uncharacterized conserved protein,
RtcB/UPF0027 family - Clostridium acetobutylicum
Length = 345
Score = 34.7 bits (76), Expect = 4.7
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 846 LGTLGAGNHYAEIQVVDEIXDK 911
LGT+G GNH+AE +VD+I D+
Sbjct: 104 LGTIGGGNHFAEFTLVDKILDE 125
>UniRef50_Q2KCK7 Cluster: Ribose ABC transporter, ATP-binding
protein; n=1; Rhizobium etli CFN 42|Rep: Ribose ABC
transporter, ATP-binding protein - Rhizobium etli
(strain CFN 42 / ATCC 51251)
Length = 477
Score = 34.7 bits (76), Expect = 4.7
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = +3
Query: 528 PGGVGFDINCGVRLLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEAL 707
PG G+R++ LH L + E L LF+H+P G MN+R E
Sbjct: 46 PGSPLEAFQAGIRVIHQELHPLSNLTVAENL---LFEHLPRRYGLVDYRKMNSRAAELLA 102
Query: 708 EMGMD 722
E+G+D
Sbjct: 103 EVGLD 107
>UniRef50_Q0LEE1 Cluster: Putative uncharacterized protein; n=3;
Chloroflexi (class)|Rep: Putative uncharacterized
protein - Herpetosiphon aurantiacus ATCC 23779
Length = 440
Score = 34.7 bits (76), Expect = 4.7
Identities = 27/92 (29%), Positives = 41/92 (44%)
Frame = +3
Query: 387 VKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINCGVR 566
++Q+ LP I + +PD H G+ IG + A + VSP VG DI C +
Sbjct: 75 LEQLLLALRLP-IAAQGALMPDAHPGFALPIGGVFA-----AHNAVSPMMVGVDIGCRMH 128
Query: 567 LLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGS 662
L ++ +EQL + L D G G+
Sbjct: 129 LTIFAEAPMEIQRQREQLFRDLADVTVFGSGA 160
>UniRef50_Q8A557 Cluster: Putative uncharacterized protein; n=2;
Bacteroides|Rep: Putative uncharacterized protein -
Bacteroides thetaiotaomicron
Length = 289
Score = 33.9 bits (74), Expect = 8.3
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +3
Query: 546 DINCGVRLLRTNLHEKDVLPIKEQLAQSLFDHI-PVGVGSKGIIPMNARD-LEEALEMGM 719
++ VRL T+ E V+ + L + F HI P + KG + D L EA ++GM
Sbjct: 125 ELQTSVRLYNTDSLE-GVMKLLPSLPKDSFIHIDPYEIDKKGASGLTYLDILIEATQLGM 183
Query: 720 DWSLREGYVWAEDKEHCEEY 779
L G++ DK H Y
Sbjct: 184 KCLLWYGFMTQHDKSHLNSY 203
>UniRef50_Q325Q3 Cluster: Putative uncharacterized protein; n=1;
Shigella boydii Sb227|Rep: Putative uncharacterized
protein - Shigella boydii serotype 4 (strain Sb227)
Length = 127
Score = 33.9 bits (74), Expect = 8.3
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +3
Query: 846 LGTLGAGNHYAEIQVVDEIXDKYAAGKMGIES 941
LG++G GNH+AE+Q VD+I + G+++
Sbjct: 68 LGSIGGGNHFAELQQVDQIINAELFALAGLDA 99
>UniRef50_Q5TSZ5 Cluster: ENSANGP00000026590; n=3; Culicidae|Rep:
ENSANGP00000026590 - Anopheles gambiae str. PEST
Length = 255
Score = 33.9 bits (74), Expect = 8.3
Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 3/122 (2%)
Frame = +3
Query: 198 RQYHXALKSLEKINPYCWSIKKGFQPNMXVEGVFYVNSTLEQLM---LEELRNCCXPGMS 368
R ++ ++E NPY +IK + E F TLE M + E + P +
Sbjct: 120 RSFNVPPPAIEPTNPYYHAIKNNPRLRHISEQDFPTTETLETTMERVVPEWTDSIIPEIR 179
Query: 369 GGFLPGVKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFD 548
GG V +A+ +L G+V G+ D F + N F +D +S+ GG+ F
Sbjct: 180 GG--KRVLVVAHGTSLRGLVKHIQGISDADI-MKFNLPNSIPFIIDFDESMKMVGGIRFL 236
Query: 549 IN 554
N
Sbjct: 237 AN 238
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 965,047,526
Number of Sequences: 1657284
Number of extensions: 19952502
Number of successful extensions: 45938
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 43840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45848
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 118725460556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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