Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_H16
         (1185 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81505-2|CAB04121.2|  505|Caenorhabditis elegans Hypothetical pr...   390   e-108
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical...    32   0.69 
Z72508-9|CAA96639.2|  410|Caenorhabditis elegans Hypothetical pr...    30   3.7  

>Z81505-2|CAB04121.2|  505|Caenorhabditis elegans Hypothetical
           protein F16A11.2 protein.
          Length = 505

 Score =  390 bits (960), Expect = e-108
 Identities = 181/252 (71%), Positives = 210/252 (83%)
 Frame = +3

Query: 198 RQYHXALKSLEKINPYCWSIKKGFQPNMXVEGVFYVNSTLEQLMLEELRNCCXPGMSGGF 377
           R +      ++++    + IKKGF PNM VEG FYVN++LEQLM +EL+  C     GGF
Sbjct: 3   RTFEEECDFIDRLTDTKFRIKKGFVPNMNVEGRFYVNNSLEQLMFDELKFSCDGQGIGGF 62

Query: 378 LPGVKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINC 557
           LP V+QIANVA+LPGIVG S+GLPD+HSGYGF+IGN+AAFD+ +P+S++SPGGVGFDINC
Sbjct: 63  LPAVRQIANVASLPGIVGHSIGLPDIHSGYGFSIGNIAAFDVGNPESVISPGGVGFDINC 122

Query: 558 GVRLLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWSLRE 737
           GVRLLRTNL E++V P+KEQL QSLFDHIPVGVGS+G IPM A DL E LEMGMDW+LRE
Sbjct: 123 GVRLLRTNLFEENVKPLKEQLTQSLFDHIPVGVGSRGAIPMLASDLVECLEMGMDWTLRE 182

Query: 738 GYVWAEDKEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQVVDEIXDKYA 917
           GY WAEDKEHCEEYGRML AD SKVSLRAKKRGLPQLGTLGAGNHYAE+QVVDEI DK+A
Sbjct: 183 GYSWAEDKEHCEEYGRMLQADASKVSLRAKKRGLPQLGTLGAGNHYAEVQVVDEIYDKHA 242

Query: 918 AGKMGIESXGQV 953
           A  MGI+  GQV
Sbjct: 243 ASTMGIDEEGQV 254



 Score = 32.7 bits (71), Expect = 0.52
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = +2

Query: 956  VMIHSGSRGLGHQVXXDA 1009
            VM+H GSRGLGHQV  D+
Sbjct: 256  VMLHCGSRGLGHQVATDS 273


>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
           protein Y59A8B.1a protein.
          Length = 1641

 Score = 32.3 bits (70), Expect = 0.69
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
 Frame = -3

Query: 739 PSLRDQSIPISNASSKSRAFIGIIPLEPTPTGIWSNKL*ANCS--LIGRTSFSCKFVLNK 566
           P  R + IP+   +S + +F G++P  P P  + ++   A  S  ++   SFS       
Sbjct: 311 PQPRPRPIPVPPTTSYNSSFCGLLPPPPVPPDLRASAASAAASPPMVQDASFSSVLTPKT 370

Query: 565 RTPQFISNPTPP 530
           + P+ I  P+PP
Sbjct: 371 KAPEKI--PSPP 380


>Z72508-9|CAA96639.2|  410|Caenorhabditis elegans Hypothetical
           protein F28H7.8 protein.
          Length = 410

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 13/57 (22%), Positives = 26/57 (45%)
 Frame = +3

Query: 249 WSIKKGFQPNMXVEGVFYVNSTLEQLMLEELRNCCXPGMSGGFLPGVKQIANVAALP 419
           WS    F P    + + +  S  ++ +L+ +   C P   GG +P ++ +  V  +P
Sbjct: 210 WSALSPFIPEQSKQRIVFAGSNWKEELLDIVDKECLPERYGGMIPDIQCLKPVDPIP 266


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,275,933
Number of Sequences: 27780
Number of extensions: 480223
Number of successful extensions: 1190
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1188
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3245116438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)