Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_H15
(1267 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0780 - 20500344-20500655 117 2e-26
09_06_0213 - 21610887-21611198 117 2e-26
09_04_0227 + 15861410-15861721 117 2e-26
07_03_0825 + 21773710-21774021 117 2e-26
05_05_0150 + 22758060-22758371 117 2e-26
05_05_0128 - 22591720-22592031 117 2e-26
04_04_0926 - 29462363-29462674 117 2e-26
03_01_0134 + 1060551-1060862 117 2e-26
02_05_0333 - 28012829-28013140 117 2e-26
01_06_1262 + 35833882-35834193 117 2e-26
05_05_0130 - 22598744-22599043,22599296-22599307 99 4e-21
08_02_1085 + 24237804-24238403 31 2.5
05_07_0055 - 27374028-27374080,27374205-27374295,27374930-273754... 31 2.5
04_04_0774 + 27986999-27987278,27987380-27987496,27987605-279877... 30 3.4
01_02_0078 - 10894871-10895841,10897268-10898426 30 3.4
>10_08_0780 - 20500344-20500655
Length = 103
Score = 117 bits (281), Expect = 2e-26
Identities = 57/70 (81%), Positives = 60/70 (85%)
Frame = +3
Query: 258 ITXPALRRLARSGGVXRISGLXYSAPRGVLKVFLENVXRAAVTYTEHAKRKPVTAMDVVY 437
IT PA+RRLAR GGV RISGL Y RGVLK+FLENV R AVTYTEHA+RK VTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 89
Query: 438 ALKRQGRTLY 467
ALKRQGRTLY
Sbjct: 90 ALKRQGRTLY 99
>09_06_0213 - 21610887-21611198
Length = 103
Score = 117 bits (281), Expect = 2e-26
Identities = 57/70 (81%), Positives = 60/70 (85%)
Frame = +3
Query: 258 ITXPALRRLARSGGVXRISGLXYSAPRGVLKVFLENVXRAAVTYTEHAKRKPVTAMDVVY 437
IT PA+RRLAR GGV RISGL Y RGVLK+FLENV R AVTYTEHA+RK VTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 89
Query: 438 ALKRQGRTLY 467
ALKRQGRTLY
Sbjct: 90 ALKRQGRTLY 99
>09_04_0227 + 15861410-15861721
Length = 103
Score = 117 bits (281), Expect = 2e-26
Identities = 57/70 (81%), Positives = 60/70 (85%)
Frame = +3
Query: 258 ITXPALRRLARSGGVXRISGLXYSAPRGVLKVFLENVXRAAVTYTEHAKRKPVTAMDVVY 437
IT PA+RRLAR GGV RISGL Y RGVLK+FLENV R AVTYTEHA+RK VTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 89
Query: 438 ALKRQGRTLY 467
ALKRQGRTLY
Sbjct: 90 ALKRQGRTLY 99
>07_03_0825 + 21773710-21774021
Length = 103
Score = 117 bits (281), Expect = 2e-26
Identities = 57/70 (81%), Positives = 60/70 (85%)
Frame = +3
Query: 258 ITXPALRRLARSGGVXRISGLXYSAPRGVLKVFLENVXRAAVTYTEHAKRKPVTAMDVVY 437
IT PA+RRLAR GGV RISGL Y RGVLK+FLENV R AVTYTEHA+RK VTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 89
Query: 438 ALKRQGRTLY 467
ALKRQGRTLY
Sbjct: 90 ALKRQGRTLY 99
>05_05_0150 + 22758060-22758371
Length = 103
Score = 117 bits (281), Expect = 2e-26
Identities = 57/70 (81%), Positives = 60/70 (85%)
Frame = +3
Query: 258 ITXPALRRLARSGGVXRISGLXYSAPRGVLKVFLENVXRAAVTYTEHAKRKPVTAMDVVY 437
IT PA+RRLAR GGV RISGL Y RGVLK+FLENV R AVTYTEHA+RK VTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 89
Query: 438 ALKRQGRTLY 467
ALKRQGRTLY
Sbjct: 90 ALKRQGRTLY 99
>05_05_0128 - 22591720-22592031
Length = 103
Score = 117 bits (281), Expect = 2e-26
Identities = 57/70 (81%), Positives = 60/70 (85%)
Frame = +3
Query: 258 ITXPALRRLARSGGVXRISGLXYSAPRGVLKVFLENVXRAAVTYTEHAKRKPVTAMDVVY 437
IT PA+RRLAR GGV RISGL Y RGVLK+FLENV R AVTYTEHA+RK VTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 89
Query: 438 ALKRQGRTLY 467
ALKRQGRTLY
Sbjct: 90 ALKRQGRTLY 99
>04_04_0926 - 29462363-29462674
Length = 103
Score = 117 bits (281), Expect = 2e-26
Identities = 57/70 (81%), Positives = 60/70 (85%)
Frame = +3
Query: 258 ITXPALRRLARSGGVXRISGLXYSAPRGVLKVFLENVXRAAVTYTEHAKRKPVTAMDVVY 437
IT PA+RRLAR GGV RISGL Y RGVLK+FLENV R AVTYTEHA+RK VTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 89
Query: 438 ALKRQGRTLY 467
ALKRQGRTLY
Sbjct: 90 ALKRQGRTLY 99
>03_01_0134 + 1060551-1060862
Length = 103
Score = 117 bits (281), Expect = 2e-26
Identities = 57/70 (81%), Positives = 60/70 (85%)
Frame = +3
Query: 258 ITXPALRRLARSGGVXRISGLXYSAPRGVLKVFLENVXRAAVTYTEHAKRKPVTAMDVVY 437
IT PA+RRLAR GGV RISGL Y RGVLK+FLENV R AVTYTEHA+RK VTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 89
Query: 438 ALKRQGRTLY 467
ALKRQGRTLY
Sbjct: 90 ALKRQGRTLY 99
>02_05_0333 - 28012829-28013140
Length = 103
Score = 117 bits (281), Expect = 2e-26
Identities = 57/70 (81%), Positives = 60/70 (85%)
Frame = +3
Query: 258 ITXPALRRLARSGGVXRISGLXYSAPRGVLKVFLENVXRAAVTYTEHAKRKPVTAMDVVY 437
IT PA+RRLAR GGV RISGL Y RGVLK+FLENV R AVTYTEHA+RK VTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 89
Query: 438 ALKRQGRTLY 467
ALKRQGRTLY
Sbjct: 90 ALKRQGRTLY 99
>01_06_1262 + 35833882-35834193
Length = 103
Score = 117 bits (281), Expect = 2e-26
Identities = 57/70 (81%), Positives = 60/70 (85%)
Frame = +3
Query: 258 ITXPALRRLARSGGVXRISGLXYSAPRGVLKVFLENVXRAAVTYTEHAKRKPVTAMDVVY 437
IT PA+RRLAR GGV RISGL Y RGVLK+FLENV R AVTYTEHA+RK VTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 89
Query: 438 ALKRQGRTLY 467
ALKRQGRTLY
Sbjct: 90 ALKRQGRTLY 99
>05_05_0130 - 22598744-22599043,22599296-22599307
Length = 103
Score = 99 bits (238), Expect = 4e-21
Identities = 48/70 (68%), Positives = 54/70 (77%)
Frame = +3
Query: 258 ITXPALRRLARSGGVXRISGLXYSAPRGVLKVFLENVXRAAVTYTEHAKRKPVTAMDVVY 437
I P +RRLAR GGV RISGL Y RGVL++FL+NV A+TYTEHA RK V AMDVVY
Sbjct: 30 IAKPVIRRLARKGGVKRISGLIYKETRGVLEIFLKNVICDAITYTEHAHRKTVMAMDVVY 89
Query: 438 ALKRQGRTLY 467
ALK QGRT+Y
Sbjct: 90 ALKLQGRTIY 99
>08_02_1085 + 24237804-24238403
Length = 199
Score = 30.7 bits (66), Expect = 2.5
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +1
Query: 277 VVWLAAVXXXVSPVLXTQRPAAFSKCSSKTXSAPLSHTPNTPSGSPSP 420
V L A V+ Q PAA K SS + S+ SHT +PS +PSP
Sbjct: 9 VAVLLAACAAVALAAEAQAPAAAPKSSSSSNSSSGSHT--SPSKAPSP 54
>05_07_0055 -
27374028-27374080,27374205-27374295,27374930-27375448,
27375544-27375779,27376363-27376846,27376993-27378282
Length = 890
Score = 30.7 bits (66), Expect = 2.5
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = +2
Query: 311 LRSYXLSAPRRSQSVPRKRXPRRCHIHRTRQAEARHRYGCCVRSETPR 454
L + + P+ P PRRCH+ T + + R ETPR
Sbjct: 54 LEEWQCARPKTRHPTPPPPPPRRCHLLFTMKLSVKRGQAMWSRKETPR 101
>04_04_0774 +
27986999-27987278,27987380-27987496,27987605-27987759,
27987855-27987929,27988025-27988321,27988448-27988780,
27988880-27988996
Length = 457
Score = 30.3 bits (65), Expect = 3.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 355 SSKTXSAPLSHTPNTPSGSPSPLWMLCTL*NAKVAP 462
+S S+ S P +P GSP P W +C++ A P
Sbjct: 37 ASSDVSSECSGEPGSPYGSPYPRWPVCSIAKAPPPP 72
>01_02_0078 - 10894871-10895841,10897268-10898426
Length = 709
Score = 30.3 bits (65), Expect = 3.4
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 335 PRRSQSVPRKRXPRRCH--IHRTRQAEARHRYGCCVRSE 445
P + PR+R RR H I R R+ +ARH G VR +
Sbjct: 560 PSALTAAPRRRQIRRVHVRIRRARRCQARHAVGELVRRQ 598
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,216,956
Number of Sequences: 37544
Number of extensions: 251702
Number of successful extensions: 686
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3922562724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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